RNA–Protein interactions for RNA: ENST00000556527.1

CRX-203, Transcript of cone-rod homeobox, humanhuman

TSL 1 (best)

Gene CRX, Length 164 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-203ENST00000556527 HECW1Q76N89 1606 aa16.14■□□□□ 0.17
CRX-203ENST00000556527 PLCH2O75038 1416 aa16.13■□□□□ 0.17
CRX-203ENST00000556527 EFCAB2Q5VUJ9 269 aa16.13■□□□□ 0.17
CRX-203ENST00000556527 YEATS2Q9ULM3 1422 aa16.12■□□□□ 0.17
CRX-203ENST00000556527 LMTK3Q96Q04 1460 aa16.12■□□□□ 0.17
CRX-203ENST00000556527 MYT1LQ9UL68 1186 aa16.12■□□□□ 0.17
CRX-203ENST00000556527 CLIP1P30622 1438 aa16.1■□□□□ 0.17
CRX-203ENST00000556527 HSPA2P54652 639 aa16.08■□□□□ 0.16
CRX-203ENST00000556527 KIF14Q15058 1648 aa16.08■□□□□ 0.16
CRX-203ENST00000556527 ARHGAP35Q9NRY4 1499 aa16.07■□□□□ 0.16
CRX-203ENST00000556527 MYO5CQ9NQX4 1742 aa16.07■□□□□ 0.16
CRX-203ENST00000556527 ARHGAP5Q13017 1502 aa16.06■□□□□ 0.16
CRX-203ENST00000556527 ATP10AO60312 1499 aa16.06■□□□□ 0.16
CRX-203ENST00000556527 C9orf84Q5VXU9 1444 aa16.06■□□□□ 0.16
CRX-203ENST00000556527 ZNF518AQ6AHZ1 1483 aa16.04■□□□□ 0.16
CRX-203ENST00000556527 TROQ12816 1431 aaPredicted RBP16.04■□□□□ 0.16
CRX-203ENST00000556527 FER1L4A9Z1Z3 1794 aa16.03■□□□□ 0.16
CRX-203ENST00000556527 CHIC1Q5VXU3 224 aa16.02■□□□□ 0.16
CRX-203ENST00000556527 ESF1Q9H501 851 aaKnown RBP16.01■□□□□ 0.15
CRX-203ENST00000556527 SIGLEC1Q9BZZ2 1709 aa16■□□□□ 0.15
CRX-203ENST00000556527 AFAP1Q8N556 730 aa16■□□□□ 0.15
CRX-203ENST00000556527 ARHGEF12Q9NZN5 1544 aa15.99■□□□□ 0.15
CRX-203ENST00000556527 CCDC18Q5T9S5 1454 aa15.97■□□□□ 0.15
CRX-203ENST00000556527 CEBPAP49715 358 aaPredicted RBP15.96■□□□□ 0.15
CRX-203ENST00000556527 CERKQ8TCT0 537 aa15.95■□□□□ 0.14
CRX-203ENST00000556527 DMRT2Q9Y5R5 561 aa15.95■□□□□ 0.14
CRX-203ENST00000556527 KDM5CP41229 1560 aa15.95■□□□□ 0.14
CRX-203ENST00000556527 PREX1Q8TCU6 1659 aa15.94■□□□□ 0.14
CRX-203ENST00000556527 UHRF1BP1Q6BDS2 1440 aa15.94■□□□□ 0.14
CRX-203ENST00000556527 CASKIN1Q8WXD9 1431 aa15.94■□□□□ 0.14
CRX-203ENST00000556527 MLH3Q9UHC1 1453 aa15.91■□□□□ 0.14
CRX-203ENST00000556527 ZNF777Q9ULD5 760 aaPredicted RBP15.91■□□□□ 0.14
CRX-203ENST00000556527 DIP2CQ9Y2E4 1556 aa15.91■□□□□ 0.14
CRX-203ENST00000556527 PREX2Q70Z35 1606 aa15.9■□□□□ 0.14
CRX-203ENST00000556527 LRRIQ1Q96JM4 1722 aa15.9■□□□□ 0.14
CRX-203ENST00000556527 CDC42BPBQ9Y5S2 1711 aa15.89■□□□□ 0.13
CRX-203ENST00000556527 ABCC1P33527 1531 aa15.89■□□□□ 0.13
CRX-203ENST00000556527 REREQ9P2R6 1566 aa15.88■□□□□ 0.13
CRX-203ENST00000556527 TRAPPC8Q9Y2L5 1435 aa15.88■□□□□ 0.13
CRX-203ENST00000556527 FYCO1Q9BQS8 1478 aa15.88■□□□□ 0.13
CRX-203ENST00000556527 ABCA6Q8N139 1617 aa15.87■□□□□ 0.13
CRX-203ENST00000556527 AGLP35573 1532 aa15.85■□□□□ 0.13
CRX-203ENST00000556527 ITSN2Q9NZM3 1697 aa15.85■□□□□ 0.13
CRX-203ENST00000556527 CNTLNQ9NXG0 1405 aa15.85■□□□□ 0.13
CRX-203ENST00000556527 SPAG9O60271 1321 aaKnown RBP15.84■□□□□ 0.13
CRX-203ENST00000556527 CFDP1Q9UEE9 299 aaPredicted RBP15.82■□□□□ 0.12
CRX-203ENST00000556527 C3P01024 1663 aa15.81■□□□□ 0.12
CRX-203ENST00000556527 CDC42BPAQ5VT25 1732 aa15.81■□□□□ 0.12
CRX-203ENST00000556527 CCNB3Q8WWL7 1395 aa15.81■□□□□ 0.12
CRX-203ENST00000556527 SYCP2Q9BX26 1530 aa15.8■□□□□ 0.12
CRX-203ENST00000556527 MTUS2Q5JR59 1369 aa15.8■□□□□ 0.12
CRX-203ENST00000556527 HNRNPMP52272 730 aaKnown RBP eCLIP15.8■□□□□ 0.12
CRX-203ENST00000556527 SETD1BQ9UPS6 1966 aaKnown RBP15.8■□□□□ 0.12
CRX-203ENST00000556527 KIDINS220Q9ULH0 1771 aa15.8■□□□□ 0.12
CRX-203ENST00000556527 SAMD9LQ8IVG5 1584 aa15.79■□□□□ 0.12
CRX-203ENST00000556527 PLEKHH2Q8IVE3 1493 aa15.79■□□□□ 0.12
CRX-203ENST00000556527 GPATCH8Q9UKJ3 1502 aaKnown RBP15.78■□□□□ 0.12
CRX-203ENST00000556527 PTPRTO14522 1441 aa15.77■□□□□ 0.12
CRX-203ENST00000556527 STRCQ7RTU9 1775 aa15.77■□□□□ 0.12
CRX-203ENST00000556527 KIAA1107Q9UPP5 1409 aa15.76■□□□□ 0.11
CRX-203ENST00000556527 ATP7AQ04656 1500 aa15.75■□□□□ 0.11
CRX-203ENST00000556527 NPATQ14207 1427 aa15.75■□□□□ 0.11
CRX-203ENST00000556527 ZMYM3Q14202 1370 aa15.75■□□□□ 0.11
CRX-203ENST00000556527 GGT6Q6P531 493 aa15.74■□□□□ 0.11
CRX-203ENST00000556527 SUPT6HQ7KZ85 1726 aaKnown RBP15.73■□□□□ 0.11
CRX-203ENST00000556527 A2MP01023 1474 aa15.72■□□□□ 0.11
CRX-203ENST00000556527 NCOA1Q15788 1441 aa15.72■□□□□ 0.11
CRX-203ENST00000556527 MROH2AA6NES4 1674 aa15.72■□□□□ 0.11
CRX-203ENST00000556527 DISP3Q9P2K9 1392 aa15.72■□□□□ 0.11
CRX-203ENST00000556527 CAMSAP1Q5T5Y3 1602 aa15.7■□□□□ 0.1
CRX-203ENST00000556527 INO80Q9ULG1 1556 aaPredicted RBP15.7■□□□□ 0.1
CRX-203ENST00000556527 CLTCQ00610 1675 aaKnown RBP15.68■□□□□ 0.1
CRX-203ENST00000556527 PPP6R1Q9UPN7 881 aa15.68■□□□□ 0.1
CRX-203ENST00000556527 EHBP1L1Q8N3D4 1523 aa15.67■□□□□ 0.1
CRX-203ENST00000556527 NCKAP5LQ9HCH0 1330 aa15.67■□□□□ 0.1
CRX-203ENST00000556527 PLXNC1O60486 1568 aa15.66■□□□□ 0.1
CRX-203ENST00000556527 PKD2Q13563 968 aa15.66■□□□□ 0.1
CRX-203ENST00000556527 ZNF644Q9H582 1327 aaPredicted RBP15.66■□□□□ 0.1
CRX-203ENST00000556527 ADGBQ8N7X0 1667 aa15.65■□□□□ 0.1
CRX-203ENST00000556527 IQSEC2Q5JU85 1478 aa15.65■□□□□ 0.1
CRX-203ENST00000556527 TIAM1Q13009 1591 aa15.64■□□□□ 0.09
CRX-203ENST00000556527 LTBP4Q8N2S1 1624 aa15.64■□□□□ 0.09
CRX-203ENST00000556527 MYO3AQ8NEV4 1616 aa15.64■□□□□ 0.09
CRX-203ENST00000556527 PTPRKQ15262 1439 aa15.63■□□□□ 0.09
CRX-203ENST00000556527 CEP170BQ9Y4F5 1589 aaPredicted RBP15.62■□□□□ 0.09
CRX-203ENST00000556527 RTEL1-TNFRSF6BF6WH68 1400 aa15.62■□□□□ 0.09
CRX-203ENST00000556527 CEP162Q5TB80 1403 aa15.62■□□□□ 0.09
CRX-203ENST00000556527 PLA2R1Q13018 1463 aa15.62■□□□□ 0.09
CRX-203ENST00000556527 ZNF335Q9H4Z2 1342 aaPredicted RBP15.62■□□□□ 0.09
CRX-203ENST00000556527 UBAP1LF5GYI3 381 aa15.61■□□□□ 0.09
CRX-203ENST00000556527 KIF3BO15066 747 aa15.61■□□□□ 0.09
CRX-203ENST00000556527 DHX29Q7Z478 1369 aaKnown RBP15.61■□□□□ 0.09
CRX-203ENST00000556527 ZNF142P52746 1687 aaPredicted RBP15.6■□□□□ 0.09
CRX-203ENST00000556527 MBD5Q9P267 1494 aa15.6■□□□□ 0.09
CRX-203ENST00000556527 RSPH4AQ5TD94 716 aa15.6■□□□□ 0.09
CRX-203ENST00000556527 WASHC2CQ9Y4E1 1318 aa15.59■□□□□ 0.09
CRX-203ENST00000556527 CCDC141Q6ZP82 1450 aa15.59■□□□□ 0.09
CRX-203ENST00000556527 TSPY4P0CV99 314 aa15.58■□□□□ 0.08
CRX-203ENST00000556527 TSPY10P0CW01 314 aa15.58■□□□□ 0.08
CRX-203ENST00000556527 SPATA31D1Q6ZQQ2 1576 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms