RNA–Protein interactions for RNA: ENST00000556272.1

PCNX1-211, Transcript of pecanex 1, humanhuman

TSL 2

Gene PCNX1, Length 2,942 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-211ENST00000556272 ZNF428Q96B54 188 aa10.58□□□□□ -0.72
PCNX1-211ENST00000556272 HSP90B1P14625 803 aaKnown RBP10.57□□□□□ -0.72
PCNX1-211ENST00000556272 CASKIN1Q8WXD9 1431 aa10.56□□□□□ -0.72
PCNX1-211ENST00000556272 RAD54L2Q9Y4B4 1467 aa10.56□□□□□ -0.72
PCNX1-211ENST00000556272 PROM2Q8N271 834 aa10.56□□□□□ -0.72
PCNX1-211ENST00000556272 LMOD2Q6P5Q4 547 aa10.55□□□□□ -0.72
PCNX1-211ENST00000556272 MIER1Q8N108 512 aa10.55□□□□□ -0.72
PCNX1-211ENST00000556272 MAPKBP1O60336 1514 aa10.55□□□□□ -0.72
PCNX1-211ENST00000556272 SETD5Q9C0A6 1442 aa10.55□□□□□ -0.72
PCNX1-211ENST00000556272 DHX37Q8IY37 1157 aaKnown RBP10.54□□□□□ -0.72
PCNX1-211ENST00000556272 ABCA5Q8WWZ7 1642 aa10.54□□□□□ -0.72
PCNX1-211ENST00000556272 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.54□□□□□ -0.72
PCNX1-211ENST00000556272 SAMD9Q5K651 1589 aa10.53□□□□□ -0.72
PCNX1-211ENST00000556272 FMN1Q68DA7 1419 aa10.53□□□□□ -0.72
PCNX1-211ENST00000556272 RAB3GAP2Q9H2M9 1393 aa10.53□□□□□ -0.72
PCNX1-211ENST00000556272 TARBP1Q13395 1621 aaKnown RBP10.53□□□□□ -0.72
PCNX1-211ENST00000556272 SPDYE4A6NLX3 237 aa10.51□□□□□ -0.73
PCNX1-211ENST00000556272 KCTD17Q8N5Z5 321 aa10.51□□□□□ -0.73
PCNX1-211ENST00000556272 PHLDB1Q86UU1 1377 aa10.51□□□□□ -0.73
PCNX1-211ENST00000556272 RGS22Q8NE09 1264 aa10.5□□□□□ -0.73
PCNX1-211ENST00000556272 SNAPC4Q5SXM2 1469 aa10.49□□□□□ -0.73
PCNX1-211ENST00000556272 PUS7Q96PZ0 661 aaKnown RBP10.49□□□□□ -0.73
PCNX1-211ENST00000556272 RAD21O60216 631 aa10.48□□□□□ -0.73
PCNX1-211ENST00000556272 IFT140Q96RY7 1462 aa10.47□□□□□ -0.73
PCNX1-211ENST00000556272 HMGB1P09429 215 aaKnown RBP10.47□□□□□ -0.73
PCNX1-211ENST00000556272 MTMR7Q9Y216 660 aa10.46□□□□□ -0.73
PCNX1-211ENST00000556272 SLC24A3Q9HC58 644 aa10.46□□□□□ -0.74
PCNX1-211ENST00000556272 RNF216Q9NWF9 866 aaPredicted RBP10.46□□□□□ -0.74
PCNX1-211ENST00000556272 TDRD9Q8NDG6 1382 aaKnown RBP10.46□□□□□ -0.74
PCNX1-211ENST00000556272 FHOD3Q2V2M9 1422 aa10.46□□□□□ -0.74
PCNX1-211ENST00000556272 APBB1O00213 710 aa10.45□□□□□ -0.74
PCNX1-211ENST00000556272 EHBP1L1Q8N3D4 1523 aa10.45□□□□□ -0.74
PCNX1-211ENST00000556272 SUPT6HQ7KZ85 1726 aaKnown RBP10.45□□□□□ -0.74
PCNX1-211ENST00000556272 PBRM1Q86U86 1689 aa10.44□□□□□ -0.74
PCNX1-211ENST00000556272 GAPVD1Q14C86 1478 aa10.44□□□□□ -0.74
PCNX1-211ENST00000556272 FGD6Q6ZV73 1430 aa10.44□□□□□ -0.74
PCNX1-211ENST00000556272 GRIN2BQ13224 1484 aa10.44□□□□□ -0.74
PCNX1-211ENST00000556272 CCDC18Q5T9S5 1454 aa10.43□□□□□ -0.74
PCNX1-211ENST00000556272 ZNF608Q9ULD9 1512 aaPredicted RBP10.43□□□□□ -0.74
PCNX1-211ENST00000556272 LRRIQ1Q96JM4 1722 aa10.43□□□□□ -0.74
PCNX1-211ENST00000556272 EIF4G3O43432 1585 aaKnown RBP10.42□□□□□ -0.74
PCNX1-211ENST00000556272 FOXD4L5Q5VV16 416 aaPredicted RBP10.42□□□□□ -0.74
PCNX1-211ENST00000556272 FOXD4L4Q8WXT5 416 aaPredicted RBP10.42□□□□□ -0.74
PCNX1-211ENST00000556272 ARHGEF11O15085 1522 aa10.42□□□□□ -0.74
PCNX1-211ENST00000556272 YTHDC1Q96MU7 727 aaKnown RBP10.42□□□□□ -0.74
PCNX1-211ENST00000556272 HFM1A2PYH4 1435 aa10.41□□□□□ -0.74
PCNX1-211ENST00000556272 PTPN23Q9H3S7 1636 aa10.4□□□□□ -0.74
PCNX1-211ENST00000556272 UBE2Q2Q8WVN8 375 aa10.4□□□□□ -0.75
PCNX1-211ENST00000556272 AKNAQ7Z591 1439 aa10.39□□□□□ -0.75
PCNX1-211ENST00000556272 HECW1Q76N89 1606 aa10.39□□□□□ -0.75
PCNX1-211ENST00000556272 UGGT2Q9NYU1 1516 aa10.39□□□□□ -0.75
PCNX1-211ENST00000556272 MYOM3Q5VTT5 1437 aa10.39□□□□□ -0.75
PCNX1-211ENST00000556272 UACAQ9BZF9 1416 aa10.39□□□□□ -0.75
PCNX1-211ENST00000556272 SPOCK2Q92563 424 aa10.39□□□□□ -0.75
PCNX1-211ENST00000556272 GCC2Q8IWJ2 1684 aa10.39□□□□□ -0.75
PCNX1-211ENST00000556272 NKX1-1Q15270 411 aaPredicted RBP10.38□□□□□ -0.75
PCNX1-211ENST00000556272 TCOF1Q13428 1488 aaKnown RBP10.38□□□□□ -0.75
PCNX1-211ENST00000556272 RBM25P49756 843 aaKnown RBP10.38□□□□□ -0.75
PCNX1-211ENST00000556272 ZC3H15Q8WU90 426 aaKnown RBP10.37□□□□□ -0.75
PCNX1-211ENST00000556272 MTUS2Q5JR59 1369 aa10.37□□□□□ -0.75
PCNX1-211ENST00000556272 NCOA2Q15596 1464 aa10.37□□□□□ -0.75
PCNX1-211ENST00000556272 FAM50AQ14320 339 aaKnown RBP10.37□□□□□ -0.75
PCNX1-211ENST00000556272 ITGAEP38570 1179 aa10.36□□□□□ -0.75
PCNX1-211ENST00000556272 ADAMTS12P58397 1594 aa10.35□□□□□ -0.75
PCNX1-211ENST00000556272 BRD2P25440 801 aaKnown RBP10.35□□□□□ -0.75
PCNX1-211ENST00000556272 IQGAP2Q13576 1575 aa10.35□□□□□ -0.75
PCNX1-211ENST00000556272 NAIPQ13075 1403 aa10.33□□□□□ -0.76
PCNX1-211ENST00000556272 MIA2Q96PC5 1412 aa10.33□□□□□ -0.76
PCNX1-211ENST00000556272 PPP1R15AO75807 674 aaPredicted RBP10.32□□□□□ -0.76
PCNX1-211ENST00000556272 CCDC82Q8N4S0 544 aa10.32□□□□□ -0.76
PCNX1-211ENST00000556272 P3H3Q8IVL6 736 aa10.31□□□□□ -0.76
PCNX1-211ENST00000556272 MAGI1Q96QZ7 1491 aaPredicted RBP10.31□□□□□ -0.76
PCNX1-211ENST00000556272 CCER2I3L3R5 266 aa10.3□□□□□ -0.76
PCNX1-211ENST00000556272 GTPBP6O43824 516 aaPredicted RBP10.3□□□□□ -0.76
PCNX1-211ENST00000556272 MKRN3Q13064 507 aaKnown RBP10.3□□□□□ -0.76
PCNX1-211ENST00000556272 HS6ST3Q8IZP7 471 aa10.3□□□□□ -0.76
PCNX1-211ENST00000556272 PTPRKQ15262 1439 aa10.29□□□□□ -0.76
PCNX1-211ENST00000556272 MAGI3Q5TCQ9 1506 aa10.29□□□□□ -0.76
PCNX1-211ENST00000556272 TONSLQ96HA7 1378 aa10.29□□□□□ -0.76
PCNX1-211ENST00000556272 EPRSP07814 1512 aaKnown RBP10.28□□□□□ -0.76
PCNX1-211ENST00000556272 AEBP1Q8IUX7 1158 aa10.28□□□□□ -0.76
PCNX1-211ENST00000556272 KCNV2Q8TDN2 545 aa10.28□□□□□ -0.76
PCNX1-211ENST00000556272 BCL11AQ9H165 835 aa10.28□□□□□ -0.76
PCNX1-211ENST00000556272 GPBP1L1Q9HC44 474 aaPredicted RBP10.28□□□□□ -0.76
PCNX1-211ENST00000556272 ATP1B4Q9UN42 357 aaPredicted RBP10.27□□□□□ -0.76
PCNX1-211ENST00000556272 KDM5BQ9UGL1 1544 aa10.27□□□□□ -0.77
PCNX1-211ENST00000556272 SIN3AQ96ST3 1273 aa10.27□□□□□ -0.77
PCNX1-211ENST00000556272 SUPT16HQ9Y5B9 1047 aaKnown RBP10.27□□□□□ -0.77
PCNX1-211ENST00000556272 SYNJ2O15056 1496 aa10.27□□□□□ -0.77
PCNX1-211ENST00000556272 GRIN2AQ12879 1464 aa10.26□□□□□ -0.77
PCNX1-211ENST00000556272 IL27Q8NEV9 243 aa10.26□□□□□ -0.77
PCNX1-211ENST00000556272 ROCK1Q13464 1354 aa10.25□□□□□ -0.77
PCNX1-211ENST00000556272 MFAP1P55081 439 aaKnown RBP10.24□□□□□ -0.77
PCNX1-211ENST00000556272 KIAA0556O60303 1618 aa10.24□□□□□ -0.77
PCNX1-211ENST00000556272 DNMT1P26358 1616 aaKnown RBP10.24□□□□□ -0.77
PCNX1-211ENST00000556272 CHD1O14646 1710 aa10.24□□□□□ -0.77
PCNX1-211ENST00000556272 KIAA0586Q9BVV6 1533 aa10.23□□□□□ -0.77
PCNX1-211ENST00000556272 CHMP7Q8WUX9 453 aaPredicted RBP10.23□□□□□ -0.77
PCNX1-211ENST00000556272 MKRN4PQ13434 485 aaPredicted RBP10.22□□□□□ -0.77
PCNX1-211ENST00000556272 ZNF692Q9BU19 519 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms