RNA–Protein interactions for RNA: ENST00000556019.2

LINC01588-209, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 3 BASIC

Gene LINC01588, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-209ENST00000556019 SCAPERQ9BY12 1400 aa17.68■□□□□ 0.42
LINC01588-209ENST00000556019 ARHGEF12Q9NZN5 1544 aa17.67■□□□□ 0.42
LINC01588-209ENST00000556019 MLECQ14165 292 aa17.65■□□□□ 0.42
LINC01588-209ENST00000556019 ATP10AO60312 1499 aa17.63■□□□□ 0.41
LINC01588-209ENST00000556019 KIF14Q15058 1648 aa17.62■□□□□ 0.41
LINC01588-209ENST00000556019 MYO5CQ9NQX4 1742 aa17.61■□□□□ 0.41
LINC01588-209ENST00000556019 CERKQ8TCT0 537 aa17.61■□□□□ 0.41
LINC01588-209ENST00000556019 C9orf84Q5VXU9 1444 aa17.6■□□□□ 0.41
LINC01588-209ENST00000556019 PREX1Q8TCU6 1659 aa17.59■□□□□ 0.41
LINC01588-209ENST00000556019 ARHGAP35Q9NRY4 1499 aa17.58■□□□□ 0.41
LINC01588-209ENST00000556019 CEBPAP49715 358 aaPredicted RBP17.58■□□□□ 0.4
LINC01588-209ENST00000556019 STRCQ7RTU9 1775 aa17.58■□□□□ 0.4
LINC01588-209ENST00000556019 LRRIQ1Q96JM4 1722 aa17.58■□□□□ 0.4
LINC01588-209ENST00000556019 KDM5CP41229 1560 aa17.57■□□□□ 0.4
LINC01588-209ENST00000556019 EFCAB2Q5VUJ9 269 aa17.55■□□□□ 0.4
LINC01588-209ENST00000556019 FMN1Q68DA7 1419 aa17.55■□□□□ 0.4
LINC01588-209ENST00000556019 DIP2CQ9Y2E4 1556 aa17.54■□□□□ 0.4
LINC01588-209ENST00000556019 ZNF518AQ6AHZ1 1483 aa17.54■□□□□ 0.4
LINC01588-209ENST00000556019 AFAP1Q8N556 730 aa17.53■□□□□ 0.4
LINC01588-209ENST00000556019 TROQ12816 1431 aaPredicted RBP17.53■□□□□ 0.4
LINC01588-209ENST00000556019 EHMT2Q96KQ7 1210 aa17.52■□□□□ 0.4
LINC01588-209ENST00000556019 CDC42BPBQ9Y5S2 1711 aa17.52■□□□□ 0.39
LINC01588-209ENST00000556019 ABCA6Q8N139 1617 aa17.51■□□□□ 0.39
LINC01588-209ENST00000556019 REREQ9P2R6 1566 aa17.51■□□□□ 0.39
LINC01588-209ENST00000556019 ATP1B4Q9UN42 357 aaPredicted RBP17.51■□□□□ 0.39
LINC01588-209ENST00000556019 ARHGAP5Q13017 1502 aa17.51■□□□□ 0.39
LINC01588-209ENST00000556019 C3P01024 1663 aa17.48■□□□□ 0.39
LINC01588-209ENST00000556019 UBTFP17480 764 aaKnown RBP17.47■□□□□ 0.39
LINC01588-209ENST00000556019 CDK11AQ9UQ88 783 aaPredicted RBP17.47■□□□□ 0.39
LINC01588-209ENST00000556019 MLH3Q9UHC1 1453 aa17.47■□□□□ 0.39
LINC01588-209ENST00000556019 TRAPPC8Q9Y2L5 1435 aa17.47■□□□□ 0.39
LINC01588-209ENST00000556019 ABCC1P33527 1531 aa17.46■□□□□ 0.39
LINC01588-209ENST00000556019 UHRF1BP1Q6BDS2 1440 aa17.46■□□□□ 0.39
LINC01588-209ENST00000556019 PREX2Q70Z35 1606 aa17.45■□□□□ 0.38
LINC01588-209ENST00000556019 AGLP35573 1532 aa17.44■□□□□ 0.38
LINC01588-209ENST00000556019 ITSN2Q9NZM3 1697 aa17.44■□□□□ 0.38
LINC01588-209ENST00000556019 SETD1BQ9UPS6 1966 aaKnown RBP17.44■□□□□ 0.38
LINC01588-209ENST00000556019 CLIP1P30622 1438 aa17.43■□□□□ 0.38
LINC01588-209ENST00000556019 KIDINS220Q9ULH0 1771 aa17.43■□□□□ 0.38
LINC01588-209ENST00000556019 ILDR2Q71H61 639 aa17.42■□□□□ 0.38
LINC01588-209ENST00000556019 LTBP4Q8N2S1 1624 aa17.4■□□□□ 0.38
LINC01588-209ENST00000556019 PTPRTO14522 1441 aa17.4■□□□□ 0.38
LINC01588-209ENST00000556019 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
LINC01588-209ENST00000556019 CDC42BPAQ5VT25 1732 aa17.39■□□□□ 0.37
LINC01588-209ENST00000556019 CASKIN1Q8WXD9 1431 aa17.38■□□□□ 0.37
LINC01588-209ENST00000556019 MYT1LQ9UL68 1186 aa17.37■□□□□ 0.37
LINC01588-209ENST00000556019 NCOA1Q15788 1441 aa17.36■□□□□ 0.37
LINC01588-209ENST00000556019 DISP3Q9P2K9 1392 aa17.35■□□□□ 0.37
LINC01588-209ENST00000556019 CCDC18Q5T9S5 1454 aa17.35■□□□□ 0.37
LINC01588-209ENST00000556019 SAMD9LQ8IVG5 1584 aa17.35■□□□□ 0.37
LINC01588-209ENST00000556019 CHIC1Q5VXU3 224 aa17.34■□□□□ 0.37
LINC01588-209ENST00000556019 MROH2AA6NES4 1674 aa17.32■□□□□ 0.36
LINC01588-209ENST00000556019 CNTLNQ9NXG0 1405 aa17.31■□□□□ 0.36
LINC01588-209ENST00000556019 SYCP2Q9BX26 1530 aa17.31■□□□□ 0.36
LINC01588-209ENST00000556019 CAMSAP1Q5T5Y3 1602 aa17.3■□□□□ 0.36
LINC01588-209ENST00000556019 SPATA31D1Q6ZQQ2 1576 aa17.29■□□□□ 0.36
LINC01588-209ENST00000556019 GPATCH8Q9UKJ3 1502 aaKnown RBP17.29■□□□□ 0.36
LINC01588-209ENST00000556019 IQSEC2Q5JU85 1478 aa17.29■□□□□ 0.36
LINC01588-209ENST00000556019 NPATQ14207 1427 aa17.29■□□□□ 0.36
LINC01588-209ENST00000556019 SUPT6HQ7KZ85 1726 aaKnown RBP17.28■□□□□ 0.36
LINC01588-209ENST00000556019 SOCS7O14512 581 aa17.28■□□□□ 0.36
LINC01588-209ENST00000556019 PLXNC1O60486 1568 aa17.28■□□□□ 0.36
LINC01588-209ENST00000556019 FYCO1Q9BQS8 1478 aa17.27■□□□□ 0.36
LINC01588-209ENST00000556019 ESF1Q9H501 851 aaKnown RBP17.27■□□□□ 0.36
LINC01588-209ENST00000556019 INO80Q9ULG1 1556 aaPredicted RBP17.27■□□□□ 0.35
LINC01588-209ENST00000556019 ZMYM3Q14202 1370 aa17.27■□□□□ 0.35
LINC01588-209ENST00000556019 CLTCQ00610 1675 aaKnown RBP17.26■□□□□ 0.35
LINC01588-209ENST00000556019 HNRNPMP52272 730 aaKnown RBP eCLIP17.25■□□□□ 0.35
LINC01588-209ENST00000556019 ZNF777Q9ULD5 760 aaPredicted RBP17.25■□□□□ 0.35
LINC01588-209ENST00000556019 ATP7AQ04656 1500 aa17.25■□□□□ 0.35
LINC01588-209ENST00000556019 NCKAP5LQ9HCH0 1330 aa17.24■□□□□ 0.35
LINC01588-209ENST00000556019 ZNF142P52746 1687 aaPredicted RBP17.24■□□□□ 0.35
LINC01588-209ENST00000556019 MYO3AQ8NEV4 1616 aa17.24■□□□□ 0.35
LINC01588-209ENST00000556019 SPAG9O60271 1321 aaKnown RBP17.23■□□□□ 0.35
LINC01588-209ENST00000556019 PTPRKQ15262 1439 aa17.22■□□□□ 0.35
LINC01588-209ENST00000556019 ZNF335Q9H4Z2 1342 aaPredicted RBP17.21■□□□□ 0.35
LINC01588-209ENST00000556019 KIAA1107Q9UPP5 1409 aa17.21■□□□□ 0.35
LINC01588-209ENST00000556019 A2MP01023 1474 aa17.21■□□□□ 0.35
LINC01588-209ENST00000556019 TCOF1Q13428 1488 aaKnown RBP17.2■□□□□ 0.34
LINC01588-209ENST00000556019 CEP170BQ9Y4F5 1589 aaPredicted RBP17.19■□□□□ 0.34
LINC01588-209ENST00000556019 PLA2R1Q13018 1463 aa17.19■□□□□ 0.34
LINC01588-209ENST00000556019 PLEKHH2Q8IVE3 1493 aa17.16■□□□□ 0.34
LINC01588-209ENST00000556019 CFDP1Q9UEE9 299 aaPredicted RBP17.15■□□□□ 0.34
LINC01588-209ENST00000556019 MBD5Q9P267 1494 aa17.15■□□□□ 0.34
LINC01588-209ENST00000556019 ADGBQ8N7X0 1667 aa17.15■□□□□ 0.34
LINC01588-209ENST00000556019 ZNF644Q9H582 1327 aaPredicted RBP17.15■□□□□ 0.34
LINC01588-209ENST00000556019 GGT6Q6P531 493 aa17.14■□□□□ 0.33
LINC01588-209ENST00000556019 TIAM1Q13009 1591 aa17.14■□□□□ 0.33
LINC01588-209ENST00000556019 CCNB3Q8WWL7 1395 aa17.14■□□□□ 0.33
LINC01588-209ENST00000556019 PKD2Q13563 968 aa17.13■□□□□ 0.33
LINC01588-209ENST00000556019 DNMT1P26358 1616 aaKnown RBP17.13■□□□□ 0.33
LINC01588-209ENST00000556019 UBAP1LF5GYI3 381 aa17.11■□□□□ 0.33
LINC01588-209ENST00000556019 A2ML1A8K2U0 1454 aa17.1■□□□□ 0.33
LINC01588-209ENST00000556019 NEURL4Q96JN8 1562 aa17.1■□□□□ 0.33
LINC01588-209ENST00000556019 MTUS2Q5JR59 1369 aa17.08■□□□□ 0.32
LINC01588-209ENST00000556019 PPP6R1Q9UPN7 881 aa17.08■□□□□ 0.32
LINC01588-209ENST00000556019 RTEL1-TNFRSF6BF6WH68 1400 aa17.07■□□□□ 0.32
LINC01588-209ENST00000556019 DHX29Q7Z478 1369 aaKnown RBP17.06■□□□□ 0.32
LINC01588-209ENST00000556019 POLR1AO95602 1720 aaPredicted RBP17.06■□□□□ 0.32
LINC01588-209ENST00000556019 FBXO31Q5XUX0 539 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms