RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 LMTK3Q96Q04 1460 aa16.01■□□□□ 0.15
PRKCH-218ENST00000555628 PCF11O94913 1555 aaKnown RBP16■□□□□ 0.15
PRKCH-218ENST00000555628 ATP10BO94823 1461 aa15.98■□□□□ 0.15
PRKCH-218ENST00000555628 PRXQ9BXM0 1461 aa15.98■□□□□ 0.15
PRKCH-218ENST00000555628 MADDQ8WXG6 1647 aa15.98■□□□□ 0.15
PRKCH-218ENST00000555628 KCNH8Q96L42 1107 aa15.97■□□□□ 0.15
PRKCH-218ENST00000555628 PHLDB1Q86UU1 1377 aa15.97■□□□□ 0.15
PRKCH-218ENST00000555628 NEO1Q92859 1461 aa15.95■□□□□ 0.14
PRKCH-218ENST00000555628 ARHGEF40Q8TER5 1519 aa15.94■□□□□ 0.14
PRKCH-218ENST00000555628 SAMD9Q5K651 1589 aa15.92■□□□□ 0.14
PRKCH-218ENST00000555628 RICTORQ6R327 1708 aa15.9■□□□□ 0.14
PRKCH-218ENST00000555628 SIGLEC1Q9BZZ2 1709 aa15.9■□□□□ 0.14
PRKCH-218ENST00000555628 RAPGEF3O95398 923 aa15.89■□□□□ 0.13
PRKCH-218ENST00000555628 RIMS1Q86UR5 1692 aaKnown RBP15.88■□□□□ 0.13
PRKCH-218ENST00000555628 RAPGEF6Q8TEU7 1601 aa15.86■□□□□ 0.13
PRKCH-218ENST00000555628 ZMYM4Q5VZL5 1548 aa15.85■□□□□ 0.13
PRKCH-218ENST00000555628 NUP153P49790 1475 aaKnown RBP15.84■□□□□ 0.13
PRKCH-218ENST00000555628 FHOD3Q2V2M9 1422 aa15.83■□□□□ 0.12
PRKCH-218ENST00000555628 ARID3CA6NKF2 412 aa15.81■□□□□ 0.12
PRKCH-218ENST00000555628 TTC37Q6PGP7 1564 aa15.79■□□□□ 0.12
PRKCH-218ENST00000555628 DENND4BO75064 1496 aaPredicted RBP15.78■□□□□ 0.12
PRKCH-218ENST00000555628 CFAP74Q9C0B2 1584 aa15.77■□□□□ 0.11
PRKCH-218ENST00000555628 YEATS2Q9ULM3 1422 aa15.77■□□□□ 0.11
PRKCH-218ENST00000555628 HSPA2P54652 639 aa15.76■□□□□ 0.11
PRKCH-218ENST00000555628 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.76■□□□□ 0.11
PRKCH-218ENST00000555628 AKNAQ7Z591 1439 aa15.76■□□□□ 0.11
PRKCH-218ENST00000555628 FANCAO15360 1455 aa15.75■□□□□ 0.11
PRKCH-218ENST00000555628 ZFYVE16Q7Z3T8 1539 aa15.74■□□□□ 0.11
PRKCH-218ENST00000555628 P3H3Q8IVL6 736 aa15.74■□□□□ 0.11
PRKCH-218ENST00000555628 EFCAB5A4FU69 1503 aa15.73■□□□□ 0.11
PRKCH-218ENST00000555628 FER1L4A9Z1Z3 1794 aa15.73■□□□□ 0.11
PRKCH-218ENST00000555628 ZBTB12Q9Y330 459 aaPredicted RBP15.73■□□□□ 0.11
PRKCH-218ENST00000555628 ARHGEF12Q9NZN5 1544 aa15.73■□□□□ 0.11
PRKCH-218ENST00000555628 MAGI2Q86UL8 1455 aa15.72■□□□□ 0.11
PRKCH-218ENST00000555628 ARID4BQ4LE39 1312 aaPredicted RBP15.72■□□□□ 0.11
PRKCH-218ENST00000555628 MKRN4PQ13434 485 aaPredicted RBP15.72■□□□□ 0.11
PRKCH-218ENST00000555628 HECW1Q76N89 1606 aa15.72■□□□□ 0.11
PRKCH-218ENST00000555628 CERKQ8TCT0 537 aa15.71■□□□□ 0.11
PRKCH-218ENST00000555628 STRCQ7RTU9 1775 aa15.7■□□□□ 0.1
PRKCH-218ENST00000555628 POGZQ7Z3K3 1410 aa15.69■□□□□ 0.1
PRKCH-218ENST00000555628 PREX1Q8TCU6 1659 aa15.69■□□□□ 0.1
PRKCH-218ENST00000555628 ILDR2Q71H61 639 aa15.66■□□□□ 0.1
PRKCH-218ENST00000555628 CDK13Q14004 1512 aaKnown RBP15.62■□□□□ 0.09
PRKCH-218ENST00000555628 PLCH2O75038 1416 aa15.61■□□□□ 0.09
PRKCH-218ENST00000555628 ATP10AO60312 1499 aa15.61■□□□□ 0.09
PRKCH-218ENST00000555628 FAM9AQ8IZU1 332 aaPredicted RBP15.61■□□□□ 0.09
PRKCH-218ENST00000555628 C9orf84Q5VXU9 1444 aa15.6■□□□□ 0.09
PRKCH-218ENST00000555628 KDM5CP41229 1560 aa15.6■□□□□ 0.09
PRKCH-218ENST00000555628 SCAPERQ9BY12 1400 aa15.6■□□□□ 0.09
PRKCH-218ENST00000555628 PLEKHD1A6NEE1 506 aa15.59■□□□□ 0.09
PRKCH-218ENST00000555628 SOCS7O14512 581 aa15.59■□□□□ 0.09
PRKCH-218ENST00000555628 REREQ9P2R6 1566 aa15.58■□□□□ 0.09
PRKCH-218ENST00000555628 DISP3Q9P2K9 1392 aa15.57■□□□□ 0.08
PRKCH-218ENST00000555628 SPATA31D1Q6ZQQ2 1576 aa15.57■□□□□ 0.08
PRKCH-218ENST00000555628 LTBP4Q8N2S1 1624 aa15.57■□□□□ 0.08
PRKCH-218ENST00000555628 MYO5CQ9NQX4 1742 aa15.56■□□□□ 0.08
PRKCH-218ENST00000555628 DIP2CQ9Y2E4 1556 aa15.55■□□□□ 0.08
PRKCH-218ENST00000555628 SETD1BQ9UPS6 1966 aaKnown RBP15.55■□□□□ 0.08
PRKCH-218ENST00000555628 MLECQ14165 292 aa15.54■□□□□ 0.08
PRKCH-218ENST00000555628 RBM42Q9BTD8 480 aaKnown RBP15.54■□□□□ 0.08
PRKCH-218ENST00000555628 KIF14Q15058 1648 aa15.54■□□□□ 0.08
PRKCH-218ENST00000555628 PTPRTO14522 1441 aa15.53■□□□□ 0.08
PRKCH-218ENST00000555628 C3P01024 1663 aa15.53■□□□□ 0.08
PRKCH-218ENST00000555628 ZNF518AQ6AHZ1 1483 aa15.52■□□□□ 0.08
PRKCH-218ENST00000555628 UHRF1BP1Q6BDS2 1440 aa15.52■□□□□ 0.08
PRKCH-218ENST00000555628 CEBPAP49715 358 aaPredicted RBP15.52■□□□□ 0.08
PRKCH-218ENST00000555628 ABCA6Q8N139 1617 aa15.52■□□□□ 0.08
PRKCH-218ENST00000555628 EEA1Q15075 1411 aa15.51■□□□□ 0.07
PRKCH-218ENST00000555628 IQSEC2Q5JU85 1478 aa15.51■□□□□ 0.07
PRKCH-218ENST00000555628 AGLP35573 1532 aa15.49■□□□□ 0.07
PRKCH-218ENST00000555628 NCOA1Q15788 1441 aa15.47■□□□□ 0.07
PRKCH-218ENST00000555628 MLH3Q9UHC1 1453 aa15.46■□□□□ 0.07
PRKCH-218ENST00000555628 LRRIQ1Q96JM4 1722 aa15.46■□□□□ 0.07
PRKCH-218ENST00000555628 CDC42BPBQ9Y5S2 1711 aa15.45■□□□□ 0.06
PRKCH-218ENST00000555628 EFCAB2Q5VUJ9 269 aa15.44■□□□□ 0.06
PRKCH-218ENST00000555628 TROQ12816 1431 aaPredicted RBP15.43■□□□□ 0.06
PRKCH-218ENST00000555628 ABCC1P33527 1531 aa15.43■□□□□ 0.06
PRKCH-218ENST00000555628 RANGAP1P46060 587 aaPredicted RBP15.43■□□□□ 0.06
PRKCH-218ENST00000555628 ARHGAP5Q13017 1502 aa15.43■□□□□ 0.06
PRKCH-218ENST00000555628 KIDINS220Q9ULH0 1771 aa15.42■□□□□ 0.06
PRKCH-218ENST00000555628 ARHGAP35Q9NRY4 1499 aa15.42■□□□□ 0.06
PRKCH-218ENST00000555628 AFAP1Q8N556 730 aa15.42■□□□□ 0.06
PRKCH-218ENST00000555628 PREX2Q70Z35 1606 aa15.42■□□□□ 0.06
PRKCH-218ENST00000555628 TRAPPC8Q9Y2L5 1435 aa15.42■□□□□ 0.06
PRKCH-218ENST00000555628 ITSN2Q9NZM3 1697 aa15.41■□□□□ 0.06
PRKCH-218ENST00000555628 MROH2AA6NES4 1674 aa15.4■□□□□ 0.06
PRKCH-218ENST00000555628 FMN1Q68DA7 1419 aa15.4■□□□□ 0.06
PRKCH-218ENST00000555628 ZNF142P52746 1687 aaPredicted RBP15.38■□□□□ 0.05
PRKCH-218ENST00000555628 NPATQ14207 1427 aa15.37■□□□□ 0.05
PRKCH-218ENST00000555628 CNTLNQ9NXG0 1405 aa15.37■□□□□ 0.05
PRKCH-218ENST00000555628 CAMSAP1Q5T5Y3 1602 aa15.37■□□□□ 0.05
PRKCH-218ENST00000555628 SPDYE2BA6NHP3 402 aa15.36■□□□□ 0.05
PRKCH-218ENST00000555628 SPDYE6P0CI01 402 aa15.36■□□□□ 0.05
PRKCH-218ENST00000555628 SPDYE2Q495Y8 402 aa15.36■□□□□ 0.05
PRKCH-218ENST00000555628 AKT1S1Q96B36 256 aa15.36■□□□□ 0.05
PRKCH-218ENST00000555628 CDC42BPAQ5VT25 1732 aa15.34■□□□□ 0.05
PRKCH-218ENST00000555628 TCOF1Q13428 1488 aaKnown RBP15.33■□□□□ 0.05
PRKCH-218ENST00000555628 PLXNC1O60486 1568 aa15.33■□□□□ 0.05
PRKCH-218ENST00000555628 SAMD9LQ8IVG5 1584 aa15.33■□□□□ 0.05
PRKCH-218ENST00000555628 CLIP1P30622 1438 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms