RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 HIRIP3Q9BW71 556 aaPredicted RBP13.98□□□□□ -0.17
RPGRIP1-208ENST00000555489 CEP170Q5SW79 1584 aa13.97□□□□□ -0.17
RPGRIP1-208ENST00000555489 CARMIL2Q6F5E8 1435 aa13.97□□□□□ -0.17
RPGRIP1-208ENST00000555489 ADCY10Q96PN6 1610 aa13.96□□□□□ -0.17
RPGRIP1-208ENST00000555489 ARID3CA6NKF2 412 aa13.95□□□□□ -0.18
RPGRIP1-208ENST00000555489 CHMP7Q8WUX9 453 aaPredicted RBP13.95□□□□□ -0.18
RPGRIP1-208ENST00000555489 RPRD2Q5VT52 1461 aaKnown RBP13.95□□□□□ -0.18
RPGRIP1-208ENST00000555489 NUP160Q12769 1436 aa13.94□□□□□ -0.18
RPGRIP1-208ENST00000555489 CAMSAP2Q08AD1 1489 aa13.93□□□□□ -0.18
RPGRIP1-208ENST00000555489 EIF4G2P78344 907 aaKnown RBP eCLIP13.93□□□□□ -0.18
RPGRIP1-208ENST00000555489 ANKRD30BQ9BXX2 1392 aa13.93□□□□□ -0.18
RPGRIP1-208ENST00000555489 ADGBQ8N7X0 1667 aa13.92□□□□□ -0.18
RPGRIP1-208ENST00000555489 ADGRL2O95490 1459 aa13.91□□□□□ -0.18
RPGRIP1-208ENST00000555489 PLB1Q6P1J6 1458 aa13.91□□□□□ -0.18
RPGRIP1-208ENST00000555489 PRG4Q92954 1404 aaPredicted RBP13.91□□□□□ -0.18
RPGRIP1-208ENST00000555489 GPATCH8Q9UKJ3 1502 aaKnown RBP13.91□□□□□ -0.18
RPGRIP1-208ENST00000555489 HSPA5P11021 654 aaKnown RBP13.9□□□□□ -0.18
RPGRIP1-208ENST00000555489 CFDP1Q9UEE9 299 aaPredicted RBP13.9□□□□□ -0.18
RPGRIP1-208ENST00000555489 TEX14Q8IWB6 1497 aa13.89□□□□□ -0.19
RPGRIP1-208ENST00000555489 ZNF644Q9H582 1327 aaPredicted RBP13.89□□□□□ -0.19
RPGRIP1-208ENST00000555489 L3MBTL2Q969R5 705 aa13.89□□□□□ -0.19
RPGRIP1-208ENST00000555489 CROCC2H7BZ55 1655 aa13.89□□□□□ -0.19
RPGRIP1-208ENST00000555489 NCOA1Q15788 1441 aa13.88□□□□□ -0.19
RPGRIP1-208ENST00000555489 WASHC2AQ641Q2 1341 aa13.88□□□□□ -0.19
RPGRIP1-208ENST00000555489 SLC4A1APQ9BWU0 796 aaKnown RBP13.88□□□□□ -0.19
RPGRIP1-208ENST00000555489 JPH4Q96JJ6 628 aa13.87□□□□□ -0.19
RPGRIP1-208ENST00000555489 KIF14Q15058 1648 aa13.86□□□□□ -0.19
RPGRIP1-208ENST00000555489 ABCA8O94911 1581 aa13.86□□□□□ -0.19
RPGRIP1-208ENST00000555489 MYT1Q01538 1121 aa13.86□□□□□ -0.19
RPGRIP1-208ENST00000555489 CNTLNQ9NXG0 1405 aa13.86□□□□□ -0.19
RPGRIP1-208ENST00000555489 ANKRD30AQ9BXX3 1397 aa13.85□□□□□ -0.19
RPGRIP1-208ENST00000555489 NEFLP07196 543 aa13.85□□□□□ -0.19
RPGRIP1-208ENST00000555489 PZPP20742 1482 aa13.85□□□□□ -0.19
RPGRIP1-208ENST00000555489 SHANK2Q9UPX8 1470 aa13.85□□□□□ -0.19
RPGRIP1-208ENST00000555489 FBLN2P98095 1184 aa13.84□□□□□ -0.19
RPGRIP1-208ENST00000555489 FOXD1Q16676 465 aa13.84□□□□□ -0.19
RPGRIP1-208ENST00000555489 PLEKHD1A6NEE1 506 aa13.82□□□□□ -0.2
RPGRIP1-208ENST00000555489 KIAA1107Q9UPP5 1409 aa13.82□□□□□ -0.2
RPGRIP1-208ENST00000555489 POLR1AO95602 1720 aaPredicted RBP13.82□□□□□ -0.2
RPGRIP1-208ENST00000555489 CCDC7Q96M83 1385 aa13.81□□□□□ -0.2
RPGRIP1-208ENST00000555489 SPATA31E1Q6ZUB1 1445 aa13.81□□□□□ -0.2
RPGRIP1-208ENST00000555489 ABCC10Q5T3U5 1492 aa13.81□□□□□ -0.2
RPGRIP1-208ENST00000555489 FKBP8Q14318 412 aa13.81□□□□□ -0.2
RPGRIP1-208ENST00000555489 CDC42BPAQ5VT25 1732 aa13.8□□□□□ -0.2
RPGRIP1-208ENST00000555489 ANKRD50Q9ULJ7 1429 aa13.8□□□□□ -0.2
RPGRIP1-208ENST00000555489 ATP10BO94823 1461 aa13.8□□□□□ -0.2
RPGRIP1-208ENST00000555489 MBD5Q9P267 1494 aa13.79□□□□□ -0.2
RPGRIP1-208ENST00000555489 NBPF8Q3BBV2 869 aa13.78□□□□□ -0.2
RPGRIP1-208ENST00000555489 ZNF777Q9ULD5 760 aaPredicted RBP13.78□□□□□ -0.2
RPGRIP1-208ENST00000555489 C9orf84Q5VXU9 1444 aa13.77□□□□□ -0.21
RPGRIP1-208ENST00000555489 KDM5DQ9BY66 1539 aa13.77□□□□□ -0.21
RPGRIP1-208ENST00000555489 ARHGEF5Q12774 1597 aa13.77□□□□□ -0.21
RPGRIP1-208ENST00000555489 HNRNPUQ00839 825 aaKnown RBP eCLIP13.75□□□□□ -0.21
RPGRIP1-208ENST00000555489 PRKRIP1Q9H875 184 aaPredicted RBP13.74□□□□□ -0.21
RPGRIP1-208ENST00000555489 ARHGEF12Q9NZN5 1544 aa13.73□□□□□ -0.21
RPGRIP1-208ENST00000555489 TSPY4P0CV99 314 aa13.73□□□□□ -0.21
RPGRIP1-208ENST00000555489 TSPY10P0CW01 314 aa13.73□□□□□ -0.21
RPGRIP1-208ENST00000555489 PKD2Q13563 968 aa13.73□□□□□ -0.21
RPGRIP1-208ENST00000555489 TSHZ2Q9NRE2 1034 aa13.73□□□□□ -0.21
RPGRIP1-208ENST00000555489 ARID4BQ4LE39 1312 aaPredicted RBP13.73□□□□□ -0.21
RPGRIP1-208ENST00000555489 C11orf95C9JLR9 678 aaPredicted RBP13.73□□□□□ -0.21
RPGRIP1-208ENST00000555489 PTPRGP23470 1445 aa13.73□□□□□ -0.21
RPGRIP1-208ENST00000555489 KIF7Q2M1P5 1343 aa13.72□□□□□ -0.21
RPGRIP1-208ENST00000555489 UHRF1BP1Q6BDS2 1440 aa13.72□□□□□ -0.21
RPGRIP1-208ENST00000555489 RSPH4AQ5TD94 716 aa13.71□□□□□ -0.21
RPGRIP1-208ENST00000555489 NUP155O75694 1391 aa13.71□□□□□ -0.21
RPGRIP1-208ENST00000555489 PREX2Q70Z35 1606 aa13.7□□□□□ -0.22
RPGRIP1-208ENST00000555489 BCANQ96GW7 911 aa13.7□□□□□ -0.22
RPGRIP1-208ENST00000555489 KIF15Q9NS87 1388 aa13.7□□□□□ -0.22
RPGRIP1-208ENST00000555489 CCDC141Q6ZP82 1450 aa13.7□□□□□ -0.22
RPGRIP1-208ENST00000555489 RALGAPBQ86X10 1494 aa13.69□□□□□ -0.22
RPGRIP1-208ENST00000555489 USP47Q96K76 1375 aa13.69□□□□□ -0.22
RPGRIP1-208ENST00000555489 KDM5CP41229 1560 aa13.68□□□□□ -0.22
RPGRIP1-208ENST00000555489 ROCK2O75116 1388 aaKnown RBP13.67□□□□□ -0.22
RPGRIP1-208ENST00000555489 ERICH6BQ5W0A0 696 aa13.67□□□□□ -0.22
RPGRIP1-208ENST00000555489 SAMD9LQ8IVG5 1584 aa13.67□□□□□ -0.22
RPGRIP1-208ENST00000555489 MRS2Q9HD23 443 aa13.66□□□□□ -0.22
RPGRIP1-208ENST00000555489 SHROOM2Q13796 1616 aa13.66□□□□□ -0.22
RPGRIP1-208ENST00000555489 CDC42BPBQ9Y5S2 1711 aa13.65□□□□□ -0.22
RPGRIP1-208ENST00000555489 ZBED9Q6R2W3 1325 aa13.65□□□□□ -0.22
RPGRIP1-208ENST00000555489 MAST1Q9Y2H9 1570 aa13.65□□□□□ -0.22
RPGRIP1-208ENST00000555489 HNRNPMP52272 730 aaKnown RBP eCLIP13.63□□□□□ -0.23
RPGRIP1-208ENST00000555489 CHD1O14646 1710 aa13.63□□□□□ -0.23
RPGRIP1-208ENST00000555489 PLEKHH2Q8IVE3 1493 aa13.62□□□□□ -0.23
RPGRIP1-208ENST00000555489 FAM135AQ9P2D6 1515 aa13.62□□□□□ -0.23
RPGRIP1-208ENST00000555489 BCORL1Q5H9F3 1711 aa13.62□□□□□ -0.23
RPGRIP1-208ENST00000555489 CCDC184Q52MB2 194 aa13.62□□□□□ -0.23
RPGRIP1-208ENST00000555489 DHX29Q7Z478 1369 aaKnown RBP13.62□□□□□ -0.23
RPGRIP1-208ENST00000555489 ZNF326Q5BKZ1 582 aaKnown RBP13.61□□□□□ -0.23
RPGRIP1-208ENST00000555489 FAM9BQ8IZU0 186 aa13.61□□□□□ -0.23
RPGRIP1-208ENST00000555489 UNC13BO14795 1591 aa13.6□□□□□ -0.23
RPGRIP1-208ENST00000555489 ABCC2Q92887 1545 aa13.6□□□□□ -0.23
RPGRIP1-208ENST00000555489 PLXNC1O60486 1568 aa13.6□□□□□ -0.23
RPGRIP1-208ENST00000555489 ARHGAP5Q13017 1502 aa13.6□□□□□ -0.23
RPGRIP1-208ENST00000555489 CARD11Q9BXL7 1154 aa13.6□□□□□ -0.23
RPGRIP1-208ENST00000555489 SYCP2Q9BX26 1530 aa13.59□□□□□ -0.23
RPGRIP1-208ENST00000555489 TTC37Q6PGP7 1564 aa13.59□□□□□ -0.23
RPGRIP1-208ENST00000555489 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.59□□□□□ -0.23
RPGRIP1-208ENST00000555489 KTN1Q86UP2 1357 aaKnown RBP13.58□□□□□ -0.24
RPGRIP1-208ENST00000555489 MYO5CQ9NQX4 1742 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms