RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 ABCC5O15440 1437 aa21.2■□□□□ 0.98
IFT43-209ENST00000555305 KDM5BQ9UGL1 1544 aa21.16■□□□□ 0.98
IFT43-209ENST00000555305 OSCARQ8IYS5 282 aa21.15■□□□□ 0.98
IFT43-209ENST00000555305 CDC42BPAQ5VT25 1732 aa21.14■□□□□ 0.97
IFT43-209ENST00000555305 ZNF316A6NFI3 1004 aaPredicted RBP21.13■□□□□ 0.97
IFT43-209ENST00000555305 SHANK2Q9UPX8 1470 aa21.13■□□□□ 0.97
IFT43-209ENST00000555305 ADGRL2O95490 1459 aa21.12■□□□□ 0.97
IFT43-209ENST00000555305 RSPH4AQ5TD94 716 aa21.12■□□□□ 0.97
IFT43-209ENST00000555305 RRP7BPQ9NSQ0 103 aa21.12■□□□□ 0.97
IFT43-209ENST00000555305 CHIC2Q9UKJ5 165 aa21.12■□□□□ 0.97
IFT43-209ENST00000555305 ZNF644Q9H582 1327 aaPredicted RBP21.12■□□□□ 0.97
IFT43-209ENST00000555305 PREX2Q70Z35 1606 aa21.1■□□□□ 0.97
IFT43-209ENST00000555305 CROCC2H7BZ55 1655 aa21.09■□□□□ 0.97
IFT43-209ENST00000555305 ADGBQ8N7X0 1667 aa21.09■□□□□ 0.97
IFT43-209ENST00000555305 ZCCHC11Q5TAX3 1644 aaKnown RBP21.08■□□□□ 0.97
IFT43-209ENST00000555305 ZNF777Q9ULD5 760 aaPredicted RBP21.08■□□□□ 0.97
IFT43-209ENST00000555305 ANKRD30AQ9BXX3 1397 aa21.08■□□□□ 0.97
IFT43-209ENST00000555305 ARHGEF5Q12774 1597 aa21.08■□□□□ 0.96
IFT43-209ENST00000555305 PLEKHH2Q8IVE3 1493 aa21.07■□□□□ 0.96
IFT43-209ENST00000555305 NCOA1Q15788 1441 aa21.06■□□□□ 0.96
IFT43-209ENST00000555305 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.04■□□□□ 0.96
IFT43-209ENST00000555305 TSPY4P0CV99 314 aa21.03■□□□□ 0.96
IFT43-209ENST00000555305 TSPY10P0CW01 314 aa21.03■□□□□ 0.96
IFT43-209ENST00000555305 KIAA1107Q9UPP5 1409 aa21.01■□□□□ 0.95
IFT43-209ENST00000555305 C9orf84Q5VXU9 1444 aa21■□□□□ 0.95
IFT43-209ENST00000555305 MYO5CQ9NQX4 1742 aa21■□□□□ 0.95
IFT43-209ENST00000555305 CCDC141Q6ZP82 1450 aa21■□□□□ 0.95
IFT43-209ENST00000555305 TTC37Q6PGP7 1564 aa21■□□□□ 0.95
IFT43-209ENST00000555305 TRIM52Q96A61 297 aa21■□□□□ 0.95
IFT43-209ENST00000555305 ARHGAP5Q13017 1502 aa21■□□□□ 0.95
IFT43-209ENST00000555305 CDC42BPBQ9Y5S2 1711 aa20.99■□□□□ 0.95
IFT43-209ENST00000555305 ARAP3Q8WWN8 1544 aa20.99■□□□□ 0.95
IFT43-209ENST00000555305 MBD5Q9P267 1494 aa20.99■□□□□ 0.95
IFT43-209ENST00000555305 PLCH2O75038 1416 aa20.98■□□□□ 0.95
IFT43-209ENST00000555305 SAMD9LQ8IVG5 1584 aa20.98■□□□□ 0.95
IFT43-209ENST00000555305 DIEXFQ68CQ4 756 aaKnown RBP20.97■□□□□ 0.95
IFT43-209ENST00000555305 WDR7Q9Y4E6 1490 aa20.96■□□□□ 0.95
IFT43-209ENST00000555305 KDM6BO15054 1643 aa20.95■□□□□ 0.95
IFT43-209ENST00000555305 MPHOSPH9Q99550 1183 aa20.95■□□□□ 0.94
IFT43-209ENST00000555305 TONSLQ96HA7 1378 aa20.95■□□□□ 0.94
IFT43-209ENST00000555305 NEUROD1Q13562 356 aa20.94■□□□□ 0.94
IFT43-209ENST00000555305 SIN3AQ96ST3 1273 aa20.94■□□□□ 0.94
IFT43-209ENST00000555305 ANKRD50Q9ULJ7 1429 aa20.93■□□□□ 0.94
IFT43-209ENST00000555305 EFCAB2Q5VUJ9 269 aa20.93■□□□□ 0.94
IFT43-209ENST00000555305 MAST1Q9Y2H9 1570 aa20.93■□□□□ 0.94
IFT43-209ENST00000555305 KCNH8Q96L42 1107 aa20.92■□□□□ 0.94
IFT43-209ENST00000555305 NPM1P06748 294 aaKnown RBP eCLIP20.9■□□□□ 0.94
IFT43-209ENST00000555305 HNRNPMP52272 730 aaKnown RBP eCLIP20.9■□□□□ 0.94
IFT43-209ENST00000555305 SYCP2Q9BX26 1530 aa20.89■□□□□ 0.93
IFT43-209ENST00000555305 KIF15Q9NS87 1388 aa20.87■□□□□ 0.93
IFT43-209ENST00000555305 PPP1R15AO75807 674 aaPredicted RBP20.87■□□□□ 0.93
IFT43-209ENST00000555305 DENND4BO75064 1496 aaPredicted RBP20.87■□□□□ 0.93
IFT43-209ENST00000555305 SLC4A1APQ9BWU0 796 aaKnown RBP20.86■□□□□ 0.93
IFT43-209ENST00000555305 ABCA9Q8IUA7 1624 aa20.85■□□□□ 0.93
IFT43-209ENST00000555305 PLXNC1O60486 1568 aa20.84■□□□□ 0.93
IFT43-209ENST00000555305 KDM5DQ9BY66 1539 aa20.84■□□□□ 0.93
IFT43-209ENST00000555305 ASXL2Q76L83 1435 aa20.84■□□□□ 0.93
IFT43-209ENST00000555305 ABCC1P33527 1531 aa20.83■□□□□ 0.92
IFT43-209ENST00000555305 ANKRD30BQ9BXX2 1392 aa20.81■□□□□ 0.92
IFT43-209ENST00000555305 PZPP20742 1482 aa20.81■□□□□ 0.92
IFT43-209ENST00000555305 RPRD2Q5VT52 1461 aaKnown RBP20.78■□□□□ 0.92
IFT43-209ENST00000555305 RTEL1-TNFRSF6BF6WH68 1400 aa20.78■□□□□ 0.92
IFT43-209ENST00000555305 DUOX2Q9NRD8 1548 aa20.77■□□□□ 0.92
IFT43-209ENST00000555305 NUP155O75694 1391 aa20.76■□□□□ 0.91
IFT43-209ENST00000555305 FANCAO15360 1455 aa20.76■□□□□ 0.91
IFT43-209ENST00000555305 ERBINQ96RT1 1412 aa20.75■□□□□ 0.91
IFT43-209ENST00000555305 ARHGEF12Q9NZN5 1544 aa20.75■□□□□ 0.91
IFT43-209ENST00000555305 CFAP74Q9C0B2 1584 aa20.71■□□□□ 0.91
IFT43-209ENST00000555305 UNC13BO14795 1591 aa20.7■□□□□ 0.9
IFT43-209ENST00000555305 PKD2Q13563 968 aa20.69■□□□□ 0.9
IFT43-209ENST00000555305 SPAG9O60271 1321 aaKnown RBP20.69■□□□□ 0.9
IFT43-209ENST00000555305 TRAPPC8Q9Y2L5 1435 aa20.68■□□□□ 0.9
IFT43-209ENST00000555305 ADGRL1O94910 1474 aa20.67■□□□□ 0.9
IFT43-209ENST00000555305 FOXD1Q16676 465 aa20.67■□□□□ 0.9
IFT43-209ENST00000555305 FAM135AQ9P2D6 1515 aa20.66■□□□□ 0.9
IFT43-209ENST00000555305 ZFYVE16Q7Z3T8 1539 aa20.65■□□□□ 0.9
IFT43-209ENST00000555305 MAGI2Q86UL8 1455 aa20.64■□□□□ 0.89
IFT43-209ENST00000555305 TEX14Q8IWB6 1497 aa20.64■□□□□ 0.89
IFT43-209ENST00000555305 CD109Q6YHK3 1445 aa20.63■□□□□ 0.89
IFT43-209ENST00000555305 SCAPERQ9BY12 1400 aa20.62■□□□□ 0.89
IFT43-209ENST00000555305 L3MBTL2Q969R5 705 aa20.62■□□□□ 0.89
IFT43-209ENST00000555305 IQGAP3Q86VI3 1631 aa20.61■□□□□ 0.89
IFT43-209ENST00000555305 INO80Q9ULG1 1556 aaPredicted RBP20.61■□□□□ 0.89
IFT43-209ENST00000555305 ATP7AQ04656 1500 aa20.61■□□□□ 0.89
IFT43-209ENST00000555305 ZNF518AQ6AHZ1 1483 aa20.6■□□□□ 0.89
IFT43-209ENST00000555305 AFAP1Q8N556 730 aa20.58■□□□□ 0.89
IFT43-209ENST00000555305 NEO1Q92859 1461 aa20.58■□□□□ 0.88
IFT43-209ENST00000555305 RIMBP3CA6NJZ7 1639 aa20.55■□□□□ 0.88
IFT43-209ENST00000555305 RIMBP3BA6NNM3 1639 aa20.55■□□□□ 0.88
IFT43-209ENST00000555305 RIMBP3Q9UFD9 1639 aa20.55■□□□□ 0.88
IFT43-209ENST00000555305 EIF2AK4Q9P2K8 1649 aaKnown RBP20.54■□□□□ 0.88
IFT43-209ENST00000555305 ATP10AO60312 1499 aa20.53■□□□□ 0.88
IFT43-209ENST00000555305 GLI2P10070 1586 aa20.53■□□□□ 0.88
IFT43-209ENST00000555305 CCDC144AA2RUR9 1427 aa20.51■□□□□ 0.87
IFT43-209ENST00000555305 EIF4G2P78344 907 aaKnown RBP eCLIP20.51■□□□□ 0.87
IFT43-209ENST00000555305 POGZQ7Z3K3 1410 aa20.51■□□□□ 0.87
IFT43-209ENST00000555305 DHX29Q7Z478 1369 aaKnown RBP20.51■□□□□ 0.87
IFT43-209ENST00000555305 MIER1Q8N108 512 aa20.51■□□□□ 0.87
IFT43-209ENST00000555305 KANK1Q14678 1352 aa20.51■□□□□ 0.87
IFT43-209ENST00000555305 CYB5RLQ6IPT4 315 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms