RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 SCAPERQ9BY12 1400 aa21.87■■□□□ 1.09
XRCC3-212ENST00000555231 PLCH2O75038 1416 aa21.86■■□□□ 1.09
XRCC3-212ENST00000555231 FER1L4A9Z1Z3 1794 aa21.86■■□□□ 1.09
XRCC3-212ENST00000555231 MAGI2Q86UL8 1455 aa21.84■■□□□ 1.09
XRCC3-212ENST00000555231 UBTFP17480 764 aaKnown RBP21.84■■□□□ 1.09
XRCC3-212ENST00000555231 MYO5CQ9NQX4 1742 aa21.83■■□□□ 1.09
XRCC3-212ENST00000555231 KIF14Q15058 1648 aa21.8■■□□□ 1.08
XRCC3-212ENST00000555231 ARHGAP35Q9NRY4 1499 aa21.8■■□□□ 1.08
XRCC3-212ENST00000555231 FMN1Q68DA7 1419 aa21.79■■□□□ 1.08
XRCC3-212ENST00000555231 EFCAB2Q5VUJ9 269 aa21.78■■□□□ 1.08
XRCC3-212ENST00000555231 ATP10AO60312 1499 aa21.77■■□□□ 1.07
XRCC3-212ENST00000555231 LRRIQ1Q96JM4 1722 aa21.75■■□□□ 1.07
XRCC3-212ENST00000555231 C9orf84Q5VXU9 1444 aa21.75■■□□□ 1.07
XRCC3-212ENST00000555231 ARHGEF12Q9NZN5 1544 aa21.75■■□□□ 1.07
XRCC3-212ENST00000555231 CDK11AQ9UQ88 783 aaPredicted RBP21.74■■□□□ 1.07
XRCC3-212ENST00000555231 ARHGAP5Q13017 1502 aa21.72■■□□□ 1.07
XRCC3-212ENST00000555231 TROQ12816 1431 aaPredicted RBP21.72■■□□□ 1.07
XRCC3-212ENST00000555231 CEBPAP49715 358 aaPredicted RBP21.71■■□□□ 1.07
XRCC3-212ENST00000555231 PREX1Q8TCU6 1659 aa21.69■■□□□ 1.06
XRCC3-212ENST00000555231 AFAP1Q8N556 730 aa21.69■■□□□ 1.06
XRCC3-212ENST00000555231 MYT1LQ9UL68 1186 aa21.69■■□□□ 1.06
XRCC3-212ENST00000555231 ZNF518AQ6AHZ1 1483 aa21.69■■□□□ 1.06
XRCC3-212ENST00000555231 CDC42BPBQ9Y5S2 1711 aa21.67■■□□□ 1.06
XRCC3-212ENST00000555231 KDM5CP41229 1560 aa21.67■■□□□ 1.06
XRCC3-212ENST00000555231 CLIP1P30622 1438 aa21.67■■□□□ 1.06
XRCC3-212ENST00000555231 CERKQ8TCT0 537 aa21.66■■□□□ 1.06
XRCC3-212ENST00000555231 DIP2CQ9Y2E4 1556 aa21.65■■□□□ 1.06
XRCC3-212ENST00000555231 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
XRCC3-212ENST00000555231 ABCA6Q8N139 1617 aa21.62■■□□□ 1.05
XRCC3-212ENST00000555231 PREX2Q70Z35 1606 aa21.6■■□□□ 1.05
XRCC3-212ENST00000555231 STRCQ7RTU9 1775 aa21.6■■□□□ 1.05
XRCC3-212ENST00000555231 TRAPPC8Q9Y2L5 1435 aa21.58■■□□□ 1.05
XRCC3-212ENST00000555231 ITSN2Q9NZM3 1697 aa21.58■■□□□ 1.05
XRCC3-212ENST00000555231 SETD1BQ9UPS6 1966 aaKnown RBP21.57■■□□□ 1.04
XRCC3-212ENST00000555231 REREQ9P2R6 1566 aa21.57■■□□□ 1.04
XRCC3-212ENST00000555231 C3P01024 1663 aa21.57■■□□□ 1.04
XRCC3-212ENST00000555231 UHRF1BP1Q6BDS2 1440 aa21.57■■□□□ 1.04
XRCC3-212ENST00000555231 ABCC1P33527 1531 aa21.57■■□□□ 1.04
XRCC3-212ENST00000555231 MLH3Q9UHC1 1453 aa21.57■■□□□ 1.04
XRCC3-212ENST00000555231 CDC42BPAQ5VT25 1732 aa21.55■■□□□ 1.04
XRCC3-212ENST00000555231 CASKIN1Q8WXD9 1431 aa21.55■■□□□ 1.04
XRCC3-212ENST00000555231 CCDC18Q5T9S5 1454 aa21.54■■□□□ 1.04
XRCC3-212ENST00000555231 KIDINS220Q9ULH0 1771 aa21.53■■□□□ 1.04
XRCC3-212ENST00000555231 AGLP35573 1532 aa21.5■■□□□ 1.03
XRCC3-212ENST00000555231 ESF1Q9H501 851 aaKnown RBP21.5■■□□□ 1.03
XRCC3-212ENST00000555231 DMRT2Q9Y5R5 561 aa21.5■■□□□ 1.03
XRCC3-212ENST00000555231 ZNF777Q9ULD5 760 aaPredicted RBP21.48■■□□□ 1.03
XRCC3-212ENST00000555231 SAMD9LQ8IVG5 1584 aa21.45■■□□□ 1.02
XRCC3-212ENST00000555231 FYCO1Q9BQS8 1478 aa21.44■■□□□ 1.02
XRCC3-212ENST00000555231 SYCP2Q9BX26 1530 aa21.43■■□□□ 1.02
XRCC3-212ENST00000555231 SUPT6HQ7KZ85 1726 aaKnown RBP21.43■■□□□ 1.02
XRCC3-212ENST00000555231 PTPRTO14522 1441 aa21.42■■□□□ 1.02
XRCC3-212ENST00000555231 HNRNPMP52272 730 aaKnown RBP eCLIP21.41■■□□□ 1.025e-6■■■■□ 20.3
XRCC3-212ENST00000555231 GPATCH8Q9UKJ3 1502 aaKnown RBP21.4■■□□□ 1.02
XRCC3-212ENST00000555231 CNTLNQ9NXG0 1405 aa21.4■■□□□ 1.02
XRCC3-212ENST00000555231 SPAG9O60271 1321 aaKnown RBP21.38■■□□□ 1.01
XRCC3-212ENST00000555231 MROH2AA6NES4 1674 aa21.37■■□□□ 1.01
XRCC3-212ENST00000555231 NCOA1Q15788 1441 aa21.36■■□□□ 1.01
XRCC3-212ENST00000555231 LTBP4Q8N2S1 1624 aa21.36■■□□□ 1.01
XRCC3-212ENST00000555231 CLTCQ00610 1675 aaKnown RBP21.35■■□□□ 1.01
XRCC3-212ENST00000555231 DISP3Q9P2K9 1392 aa21.35■■□□□ 1.01
XRCC3-212ENST00000555231 ATP7AQ04656 1500 aa21.34■■□□□ 1.01
XRCC3-212ENST00000555231 CAMSAP1Q5T5Y3 1602 aa21.34■■□□□ 1.01
XRCC3-212ENST00000555231 ZMYM3Q14202 1370 aa21.34■■□□□ 1.01
XRCC3-212ENST00000555231 INO80Q9ULG1 1556 aaPredicted RBP21.32■■□□□ 1
XRCC3-212ENST00000555231 NPATQ14207 1427 aa21.32■■□□□ 1
XRCC3-212ENST00000555231 CFDP1Q9UEE9 299 aaPredicted RBP21.32■■□□□ 1
XRCC3-212ENST00000555231 CCNB3Q8WWL7 1395 aa21.31■■□□□ 1
XRCC3-212ENST00000555231 ILDR2Q71H61 639 aa21.3■■□□□ 1
XRCC3-212ENST00000555231 A2MP01023 1474 aa21.3■■□□□ 1
XRCC3-212ENST00000555231 PLXNC1O60486 1568 aa21.3■■□□□ 1
XRCC3-212ENST00000555231 KIAA1107Q9UPP5 1409 aa21.29■■□□□ 1
XRCC3-212ENST00000555231 PLEKHH2Q8IVE3 1493 aa21.29■■□□□ 1
XRCC3-212ENST00000555231 NCKAP5LQ9HCH0 1330 aa21.29■■□□□ 1
XRCC3-212ENST00000555231 GGT6Q6P531 493 aa21.28■■□□□ 1
XRCC3-212ENST00000555231 MTUS2Q5JR59 1369 aa21.27■■□□□ 1
XRCC3-212ENST00000555231 MYO3AQ8NEV4 1616 aa21.27■■□□□ 1
XRCC3-212ENST00000555231 ZNF644Q9H582 1327 aaPredicted RBP21.25■□□□□ 0.99
XRCC3-212ENST00000555231 ZNF142P52746 1687 aaPredicted RBP21.24■□□□□ 0.99
XRCC3-212ENST00000555231 ADGBQ8N7X0 1667 aa21.24■□□□□ 0.99
XRCC3-212ENST00000555231 IQSEC2Q5JU85 1478 aa21.24■□□□□ 0.99
XRCC3-212ENST00000555231 TIAM1Q13009 1591 aa21.23■□□□□ 0.99
XRCC3-212ENST00000555231 SPATA31D1Q6ZQQ2 1576 aa21.23■□□□□ 0.99
XRCC3-212ENST00000555231 PTPRKQ15262 1439 aa21.23■□□□□ 0.99
XRCC3-212ENST00000555231 CEP170BQ9Y4F5 1589 aaPredicted RBP21.23■□□□□ 0.99
XRCC3-212ENST00000555231 ZNF335Q9H4Z2 1342 aaPredicted RBP21.22■□□□□ 0.99
XRCC3-212ENST00000555231 EHBP1L1Q8N3D4 1523 aa21.19■□□□□ 0.98
XRCC3-212ENST00000555231 PLA2R1Q13018 1463 aa21.18■□□□□ 0.98
XRCC3-212ENST00000555231 MBD5Q9P267 1494 aa21.18■□□□□ 0.98
XRCC3-212ENST00000555231 TCOF1Q13428 1488 aaKnown RBP21.16■□□□□ 0.98
XRCC3-212ENST00000555231 SOCS7O14512 581 aa21.16■□□□□ 0.98
XRCC3-212ENST00000555231 PKD2Q13563 968 aa21.16■□□□□ 0.98
XRCC3-212ENST00000555231 UBAP1LF5GYI3 381 aa21.14■□□□□ 0.97
XRCC3-212ENST00000555231 PPP6R1Q9UPN7 881 aa21.13■□□□□ 0.97
XRCC3-212ENST00000555231 DNMT1P26358 1616 aaKnown RBP21.12■□□□□ 0.97
XRCC3-212ENST00000555231 RTEL1-TNFRSF6BF6WH68 1400 aa21.12■□□□□ 0.97
XRCC3-212ENST00000555231 CEP162Q5TB80 1403 aa21.12■□□□□ 0.97
XRCC3-212ENST00000555231 DHX29Q7Z478 1369 aaKnown RBP21.11■□□□□ 0.97
XRCC3-212ENST00000555231 A2ML1A8K2U0 1454 aa21.11■□□□□ 0.97
XRCC3-212ENST00000555231 KIF3BO15066 747 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms