RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 RRP7BPQ9NSQ0 103 aa14.44□□□□□ -0.1
PRKCH-211ENST00000555082 MIA2Q96PC5 1412 aa14.42□□□□□ -0.1
PRKCH-211ENST00000555082 RAB3GAP2Q9H2M9 1393 aa14.42□□□□□ -0.1
PRKCH-211ENST00000555082 NPM1P06748 294 aaKnown RBP eCLIP14.42□□□□□ -0.1
PRKCH-211ENST00000555082 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.41□□□□□ -0.1
PRKCH-211ENST00000555082 TCOF1Q13428 1488 aaKnown RBP14.4□□□□□ -0.1
PRKCH-211ENST00000555082 HNRNPMP52272 730 aaKnown RBP eCLIP14.4□□□□□ -0.1
PRKCH-211ENST00000555082 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.39□□□□□ -0.11
PRKCH-211ENST00000555082 ASXL2Q76L83 1435 aa14.38□□□□□ -0.11
PRKCH-211ENST00000555082 TTC37Q6PGP7 1564 aa14.38□□□□□ -0.11
PRKCH-211ENST00000555082 CAMSAP2Q08AD1 1489 aa14.38□□□□□ -0.11
PRKCH-211ENST00000555082 RIMBP3CA6NJZ7 1639 aa14.38□□□□□ -0.11
PRKCH-211ENST00000555082 RIMBP3BA6NNM3 1639 aa14.38□□□□□ -0.11
PRKCH-211ENST00000555082 RIMBP3Q9UFD9 1639 aa14.38□□□□□ -0.11
PRKCH-211ENST00000555082 SETD5Q9C0A6 1442 aa14.38□□□□□ -0.11
PRKCH-211ENST00000555082 ABCC5O15440 1437 aa14.37□□□□□ -0.11
PRKCH-211ENST00000555082 WDR7Q9Y4E6 1490 aa14.36□□□□□ -0.11
PRKCH-211ENST00000555082 DAPK1P53355 1430 aa14.35□□□□□ -0.11
PRKCH-211ENST00000555082 CDC42BPAQ5VT25 1732 aa14.35□□□□□ -0.11
PRKCH-211ENST00000555082 DHX57Q6P158 1386 aaKnown RBP14.34□□□□□ -0.11
PRKCH-211ENST00000555082 ARHGAP5Q13017 1502 aa14.33□□□□□ -0.12
PRKCH-211ENST00000555082 NAIPQ13075 1403 aa14.32□□□□□ -0.12
PRKCH-211ENST00000555082 ITSN2Q9NZM3 1697 aa14.31□□□□□ -0.12
PRKCH-211ENST00000555082 HFM1A2PYH4 1435 aa14.3□□□□□ -0.12
PRKCH-211ENST00000555082 CDC42BPBQ9Y5S2 1711 aa14.3□□□□□ -0.12
PRKCH-211ENST00000555082 PLCH2O75038 1416 aa14.29□□□□□ -0.12
PRKCH-211ENST00000555082 EFCAB2Q5VUJ9 269 aa14.28□□□□□ -0.12
PRKCH-211ENST00000555082 SUPT16HQ9Y5B9 1047 aaKnown RBP14.28□□□□□ -0.12
PRKCH-211ENST00000555082 SAMD9LQ8IVG5 1584 aa14.28□□□□□ -0.12
PRKCH-211ENST00000555082 DNMT1P26358 1616 aaKnown RBP14.28□□□□□ -0.12
PRKCH-211ENST00000555082 PREX2Q70Z35 1606 aa14.28□□□□□ -0.12
PRKCH-211ENST00000555082 MBD5Q9P267 1494 aa14.27□□□□□ -0.13
PRKCH-211ENST00000555082 TRIM52Q96A61 297 aa14.27□□□□□ -0.13
PRKCH-211ENST00000555082 KDM6BO15054 1643 aa14.27□□□□□ -0.13
PRKCH-211ENST00000555082 AKNAQ7Z591 1439 aa14.26□□□□□ -0.13
PRKCH-211ENST00000555082 TSPY4P0CV99 314 aa14.26□□□□□ -0.13
PRKCH-211ENST00000555082 TSPY10P0CW01 314 aa14.26□□□□□ -0.13
PRKCH-211ENST00000555082 SYCP2Q9BX26 1530 aa14.26□□□□□ -0.13
PRKCH-211ENST00000555082 ARHGEF12Q9NZN5 1544 aa14.26□□□□□ -0.13
PRKCH-211ENST00000555082 AFAP1Q8N556 730 aa14.25□□□□□ -0.13
PRKCH-211ENST00000555082 NCOA1Q15788 1441 aa14.24□□□□□ -0.13
PRKCH-211ENST00000555082 C9orf84Q5VXU9 1444 aa14.24□□□□□ -0.13
PRKCH-211ENST00000555082 MYO5CQ9NQX4 1742 aa14.23□□□□□ -0.13
PRKCH-211ENST00000555082 TRAPPC8Q9Y2L5 1435 aa14.22□□□□□ -0.13
PRKCH-211ENST00000555082 SIN3AQ96ST3 1273 aa14.22□□□□□ -0.13
PRKCH-211ENST00000555082 FANCAO15360 1455 aa14.21□□□□□ -0.13
PRKCH-211ENST00000555082 CD109Q6YHK3 1445 aa14.21□□□□□ -0.13
PRKCH-211ENST00000555082 ROCK1Q13464 1354 aa14.21□□□□□ -0.13
PRKCH-211ENST00000555082 FAM69CQ0P6D2 419 aa14.21□□□□□ -0.13
PRKCH-211ENST00000555082 FOXD1Q16676 465 aa14.21□□□□□ -0.13
PRKCH-211ENST00000555082 ANKRD30AQ9BXX3 1397 aa14.2□□□□□ -0.14
PRKCH-211ENST00000555082 CCDC141Q6ZP82 1450 aa14.2□□□□□ -0.14
PRKCH-211ENST00000555082 ABCA9Q8IUA7 1624 aa14.2□□□□□ -0.14
PRKCH-211ENST00000555082 TSHZ2Q9NRE2 1034 aa14.19□□□□□ -0.14
PRKCH-211ENST00000555082 MAPKBP1O60336 1514 aa14.19□□□□□ -0.14
PRKCH-211ENST00000555082 MYT1LQ9UL68 1186 aa14.18□□□□□ -0.14
PRKCH-211ENST00000555082 KIF15Q9NS87 1388 aa14.18□□□□□ -0.14
PRKCH-211ENST00000555082 SCAPERQ9BY12 1400 aa14.17□□□□□ -0.14
PRKCH-211ENST00000555082 KIAA1107Q9UPP5 1409 aa14.17□□□□□ -0.14
PRKCH-211ENST00000555082 BCANQ96GW7 911 aa14.17□□□□□ -0.14
PRKCH-211ENST00000555082 ABCC1P33527 1531 aa14.16□□□□□ -0.14
PRKCH-211ENST00000555082 RSPH4AQ5TD94 716 aa14.16□□□□□ -0.14
PRKCH-211ENST00000555082 ARHGEF5Q12774 1597 aa14.16□□□□□ -0.14
PRKCH-211ENST00000555082 ADGRL2O95490 1459 aa14.16□□□□□ -0.14
PRKCH-211ENST00000555082 CROCC2H7BZ55 1655 aa14.15□□□□□ -0.14
PRKCH-211ENST00000555082 ANKRD50Q9ULJ7 1429 aa14.15□□□□□ -0.14
PRKCH-211ENST00000555082 ADGRL1O94910 1474 aa14.15□□□□□ -0.14
PRKCH-211ENST00000555082 MPHOSPH9Q99550 1183 aa14.15□□□□□ -0.14
PRKCH-211ENST00000555082 GCC2Q8IWJ2 1684 aa14.15□□□□□ -0.14
PRKCH-211ENST00000555082 SPAG9O60271 1321 aaKnown RBP14.14□□□□□ -0.15
PRKCH-211ENST00000555082 PLEKHH2Q8IVE3 1493 aa14.14□□□□□ -0.15
PRKCH-211ENST00000555082 SHANK2Q9UPX8 1470 aa14.14□□□□□ -0.15
PRKCH-211ENST00000555082 RAPGEF3O95398 923 aa14.14□□□□□ -0.15
PRKCH-211ENST00000555082 DENND4BO75064 1496 aaPredicted RBP14.13□□□□□ -0.15
PRKCH-211ENST00000555082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.15
PRKCH-211ENST00000555082 SLC4A1APQ9BWU0 796 aaKnown RBP14.12□□□□□ -0.15
PRKCH-211ENST00000555082 ARAP3Q8WWN8 1544 aa14.11□□□□□ -0.15
PRKCH-211ENST00000555082 CLSPNQ9HAW4 1339 aa14.11□□□□□ -0.15
PRKCH-211ENST00000555082 ADGBQ8N7X0 1667 aa14.1□□□□□ -0.15
PRKCH-211ENST00000555082 NUP155O75694 1391 aa14.09□□□□□ -0.15
PRKCH-211ENST00000555082 ANP32EQ9BTT0 268 aa14.08□□□□□ -0.15
PRKCH-211ENST00000555082 DIP2BQ9P265 1576 aa14.07□□□□□ -0.16
PRKCH-211ENST00000555082 PKD2Q13563 968 aa14.06□□□□□ -0.16
PRKCH-211ENST00000555082 PZPP20742 1482 aa14.06□□□□□ -0.16
PRKCH-211ENST00000555082 MAST1Q9Y2H9 1570 aa14.04□□□□□ -0.16
PRKCH-211ENST00000555082 TSPOAP1O95153 1857 aa14.04□□□□□ -0.16
PRKCH-211ENST00000555082 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
PRKCH-211ENST00000555082 ZFYVE16Q7Z3T8 1539 aa14.03□□□□□ -0.16
PRKCH-211ENST00000555082 MAP3K4Q9Y6R4 1608 aa14.03□□□□□ -0.16
PRKCH-211ENST00000555082 POGZQ7Z3K3 1410 aa14.03□□□□□ -0.16
PRKCH-211ENST00000555082 KIF3BO15066 747 aa14.02□□□□□ -0.17
PRKCH-211ENST00000555082 ATP7AQ04656 1500 aa14.02□□□□□ -0.17
PRKCH-211ENST00000555082 GLI2P10070 1586 aa14.02□□□□□ -0.17
PRKCH-211ENST00000555082 FKBP8Q14318 412 aa14.01□□□□□ -0.17
PRKCH-211ENST00000555082 ZNF518AQ6AHZ1 1483 aa14.01□□□□□ -0.17
PRKCH-211ENST00000555082 RTEL1-TNFRSF6BF6WH68 1400 aa14.01□□□□□ -0.17
PRKCH-211ENST00000555082 TRHP20396 242 aaPredicted RBP14.01□□□□□ -0.17
PRKCH-211ENST00000555082 NEO1Q92859 1461 aa14.01□□□□□ -0.17
PRKCH-211ENST00000555082 PLXNC1O60486 1568 aa13.99□□□□□ -0.17
PRKCH-211ENST00000555082 ANKRD30BQ9BXX2 1392 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms