RNA–Protein interactions for RNA: ENST00000554981.1

TMEM260-205, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-205ENST00000554981 EPRSP07814 1512 aaKnown RBP9.48□□□□□ -0.89
TMEM260-205ENST00000554981 REM2Q8IYK8 340 aaPredicted RBP9.48□□□□□ -0.89
TMEM260-205ENST00000554981 TEX14Q8IWB6 1497 aa9.47□□□□□ -0.89
TMEM260-205ENST00000554981 CHRDL2Q6WN34 429 aa9.47□□□□□ -0.89
TMEM260-205ENST00000554981 IGF1RP08069 1367 aa9.47□□□□□ -0.89
TMEM260-205ENST00000554981 CERKQ8TCT0 537 aa9.46□□□□□ -0.9
TMEM260-205ENST00000554981 PTPRMP28827 1452 aa9.46□□□□□ -0.9
TMEM260-205ENST00000554981 SPATA31D1Q6ZQQ2 1576 aa9.46□□□□□ -0.9
TMEM260-205ENST00000554981 KIAA0586Q9BVV6 1533 aa9.45□□□□□ -0.9
TMEM260-205ENST00000554981 PCF11O94913 1555 aaKnown RBP9.45□□□□□ -0.9
TMEM260-205ENST00000554981 PRR29P0C7W0 189 aa9.43□□□□□ -0.9
TMEM260-205ENST00000554981 HSPA2P54652 639 aa9.43□□□□□ -0.9
TMEM260-205ENST00000554981 CARMIL1Q5VZK9 1371 aa9.42□□□□□ -0.9
TMEM260-205ENST00000554981 TNIKQ9UKE5 1360 aa9.41□□□□□ -0.9
TMEM260-205ENST00000554981 SPOCK2Q92563 424 aa9.41□□□□□ -0.9
TMEM260-205ENST00000554981 ZBTB47Q9UFB7 747 aaPredicted RBP9.41□□□□□ -0.9
TMEM260-205ENST00000554981 ADAMTSL3P82987 1691 aa9.41□□□□□ -0.9
TMEM260-205ENST00000554981 ZCCHC11Q5TAX3 1644 aaKnown RBP9.4□□□□□ -0.9
TMEM260-205ENST00000554981 UHRF1BP1LA0JNW5 1464 aa9.4□□□□□ -0.91
TMEM260-205ENST00000554981 UACAQ9BZF9 1416 aa9.39□□□□□ -0.91
TMEM260-205ENST00000554981 MADDQ8WXG6 1647 aa9.38□□□□□ -0.91
TMEM260-205ENST00000554981 IQGAP2Q13576 1575 aa9.37□□□□□ -0.91
TMEM260-205ENST00000554981 KDM5BQ9UGL1 1544 aa9.37□□□□□ -0.91
TMEM260-205ENST00000554981 PITPNM1O00562 1244 aa9.37□□□□□ -0.91
TMEM260-205ENST00000554981 CARMIL2Q6F5E8 1435 aa9.37□□□□□ -0.91
TMEM260-205ENST00000554981 RAPGEF2Q9Y4G8 1499 aa9.36□□□□□ -0.91
TMEM260-205ENST00000554981 CD109Q6YHK3 1445 aa9.36□□□□□ -0.91
TMEM260-205ENST00000554981 WDR7Q9Y4E6 1490 aa9.34□□□□□ -0.91
TMEM260-205ENST00000554981 KCNH8Q96L42 1107 aa9.34□□□□□ -0.91
TMEM260-205ENST00000554981 RIMS1Q86UR5 1692 aaKnown RBP9.34□□□□□ -0.91
TMEM260-205ENST00000554981 MAGI3Q5TCQ9 1506 aa9.34□□□□□ -0.91
TMEM260-205ENST00000554981 BCORL1Q5H9F3 1711 aa9.34□□□□□ -0.92
TMEM260-205ENST00000554981 CTTNBP2Q8WZ74 1663 aa9.33□□□□□ -0.92
TMEM260-205ENST00000554981 CFAP43Q8NDM7 1665 aa9.32□□□□□ -0.92
TMEM260-205ENST00000554981 ARID4BQ4LE39 1312 aaPredicted RBP9.32□□□□□ -0.92
TMEM260-205ENST00000554981 DISP1Q96F81 1524 aa9.31□□□□□ -0.92
TMEM260-205ENST00000554981 KIAA0556O60303 1618 aa9.3□□□□□ -0.92
TMEM260-205ENST00000554981 RAPGEF3O95398 923 aa9.29□□□□□ -0.92
TMEM260-205ENST00000554981 PIP4P2Q8N4L2 257 aa9.29□□□□□ -0.92
TMEM260-205ENST00000554981 UGGT2Q9NYU1 1516 aa9.29□□□□□ -0.92
TMEM260-205ENST00000554981 ARAP3Q8WWN8 1544 aa9.28□□□□□ -0.92
TMEM260-205ENST00000554981 PRXQ9BXM0 1461 aa9.28□□□□□ -0.92
TMEM260-205ENST00000554981 FXR2P51116 673 aaKnown RBP eCLIP9.27□□□□□ -0.93
TMEM260-205ENST00000554981 CREBZFQ9NS37 354 aa9.27□□□□□ -0.93
TMEM260-205ENST00000554981 CIZ1Q9ULV3 898 aaPredicted RBP9.27□□□□□ -0.93
TMEM260-205ENST00000554981 FAM9AQ8IZU1 332 aaPredicted RBP9.26□□□□□ -0.93
TMEM260-205ENST00000554981 PKD2Q13563 968 aa9.24□□□□□ -0.93
TMEM260-205ENST00000554981 FRMPD1Q5SYB0 1578 aa9.24□□□□□ -0.93
TMEM260-205ENST00000554981 ARID3CA6NKF2 412 aa9.23□□□□□ -0.93
TMEM260-205ENST00000554981 ECM2O94769 699 aaPredicted RBP9.23□□□□□ -0.93
TMEM260-205ENST00000554981 STRCQ7RTU9 1775 aa9.22□□□□□ -0.93
TMEM260-205ENST00000554981 RANGAP1P46060 587 aaPredicted RBP9.21□□□□□ -0.94
TMEM260-205ENST00000554981 P3H3Q8IVL6 736 aa9.21□□□□□ -0.94
TMEM260-205ENST00000554981 SIGLEC1Q9BZZ2 1709 aa9.21□□□□□ -0.94
TMEM260-205ENST00000554981 GOLGA3Q08378 1498 aa9.21□□□□□ -0.94
TMEM260-205ENST00000554981 MLECQ14165 292 aa9.2□□□□□ -0.94
TMEM260-205ENST00000554981 DCAF8Q5TAQ9 597 aa9.2□□□□□ -0.94
TMEM260-205ENST00000554981 GSE1Q14687 1217 aa9.19□□□□□ -0.94
TMEM260-205ENST00000554981 CHADLQ6NUI6 762 aa9.19□□□□□ -0.94
TMEM260-205ENST00000554981 EEA1Q15075 1411 aa9.19□□□□□ -0.94
TMEM260-205ENST00000554981 YEATS2Q9ULM3 1422 aa9.19□□□□□ -0.94
TMEM260-205ENST00000554981 ARHGEF40Q8TER5 1519 aa9.19□□□□□ -0.94
TMEM260-205ENST00000554981 ABCA8O94911 1581 aa9.19□□□□□ -0.94
TMEM260-205ENST00000554981 PREX1Q8TCU6 1659 aa9.17□□□□□ -0.94
TMEM260-205ENST00000554981 CEBPAP49715 358 aaPredicted RBP9.17□□□□□ -0.94
TMEM260-205ENST00000554981 FER1L4A9Z1Z3 1794 aa9.17□□□□□ -0.94
TMEM260-205ENST00000554981 LTBP4Q8N2S1 1624 aa9.16□□□□□ -0.94
TMEM260-205ENST00000554981 SAMD9Q5K651 1589 aa9.16□□□□□ -0.94
TMEM260-205ENST00000554981 PRKAR2AP13861 404 aaKnown RBP9.16□□□□□ -0.94
TMEM260-205ENST00000554981 MNX1P50219 401 aaPredicted RBP9.16□□□□□ -0.94
TMEM260-205ENST00000554981 NUBP1P53384 320 aa9.16□□□□□ -0.94
TMEM260-205ENST00000554981 FAM212AQ96EL1 285 aa9.16□□□□□ -0.94
TMEM260-205ENST00000554981 ABCA9Q8IUA7 1624 aa9.16□□□□□ -0.94
TMEM260-205ENST00000554981 TTC37Q6PGP7 1564 aa9.15□□□□□ -0.95
TMEM260-205ENST00000554981 FANCAO15360 1455 aa9.15□□□□□ -0.95
TMEM260-205ENST00000554981 FHOD3Q2V2M9 1422 aa9.14□□□□□ -0.95
TMEM260-205ENST00000554981 PHLDB1Q86UU1 1377 aa9.14□□□□□ -0.95
TMEM260-205ENST00000554981 NEO1Q92859 1461 aa9.14□□□□□ -0.95
TMEM260-205ENST00000554981 RAPGEF6Q8TEU7 1601 aa9.13□□□□□ -0.95
TMEM260-205ENST00000554981 MED1Q15648 1581 aaPredicted RBP9.13□□□□□ -0.95
TMEM260-205ENST00000554981 RICTORQ6R327 1708 aa9.13□□□□□ -0.95
TMEM260-205ENST00000554981 POGZQ7Z3K3 1410 aa9.13□□□□□ -0.95
TMEM260-205ENST00000554981 UBAP1LF5GYI3 381 aa9.12□□□□□ -0.95
TMEM260-205ENST00000554981 FARP1Q9Y4F1 1045 aaPredicted RBP9.12□□□□□ -0.95
TMEM260-205ENST00000554981 ATP10BO94823 1461 aa9.11□□□□□ -0.95
TMEM260-205ENST00000554981 AKNAQ7Z591 1439 aa9.11□□□□□ -0.95
TMEM260-205ENST00000554981 DENND4BO75064 1496 aaPredicted RBP9.1□□□□□ -0.95
TMEM260-205ENST00000554981 PTPRTO14522 1441 aa9.1□□□□□ -0.95
TMEM260-205ENST00000554981 IQSEC2Q5JU85 1478 aa9.09□□□□□ -0.95
TMEM260-205ENST00000554981 UHRF1BP1Q6BDS2 1440 aa9.09□□□□□ -0.95
TMEM260-205ENST00000554981 UBTFP17480 764 aaKnown RBP9.09□□□□□ -0.95
TMEM260-205ENST00000554981 ZFYVE16Q7Z3T8 1539 aa9.09□□□□□ -0.95
TMEM260-205ENST00000554981 RASEFQ8IZ41 740 aa9.08□□□□□ -0.96
TMEM260-205ENST00000554981 EFCAB5A4FU69 1503 aa9.08□□□□□ -0.96
TMEM260-205ENST00000554981 NUP153P49790 1475 aaKnown RBP9.08□□□□□ -0.96
TMEM260-205ENST00000554981 ARHGEF12Q9NZN5 1544 aa9.07□□□□□ -0.96
TMEM260-205ENST00000554981 RGL2O15211 777 aa9.07□□□□□ -0.96
TMEM260-205ENST00000554981 HSPA1LP34931 641 aa9.07□□□□□ -0.96
TMEM260-205ENST00000554981 TSPYL2Q9H2G4 693 aaPredicted RBP9.06□□□□□ -0.96
TMEM260-205ENST00000554981 ZNF335Q9H4Z2 1342 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms