RNA–Protein interactions for RNA: ENST00000554961.5

PSMA6-209, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-209ENST00000554961 ZNF335Q9H4Z2 1342 aaPredicted RBP14.03□□□□□ -0.16
PSMA6-209ENST00000554961 FHOD3Q2V2M9 1422 aa14.03□□□□□ -0.16
PSMA6-209ENST00000554961 RGS17Q9UGC6 210 aaPredicted RBP14.02□□□□□ -0.17
PSMA6-209ENST00000554961 DENND4BO75064 1496 aaPredicted RBP14.01□□□□□ -0.17
PSMA6-209ENST00000554961 SETD1AO15047 1707 aaKnown RBP14.01□□□□□ -0.17
PSMA6-209ENST00000554961 CEBPAP49715 358 aaPredicted RBP14□□□□□ -0.17
PSMA6-209ENST00000554961 SCAF1Q9H7N4 1312 aaKnown RBP13.99□□□□□ -0.17
PSMA6-209ENST00000554961 SUPT5HO00267 1087 aaKnown RBP13.99□□□□□ -0.17
PSMA6-209ENST00000554961 MLECQ14165 292 aa13.99□□□□□ -0.17
PSMA6-209ENST00000554961 MAGI2Q86UL8 1455 aa13.99□□□□□ -0.17
PSMA6-209ENST00000554961 PIP4K2BP78356 416 aa13.97□□□□□ -0.17
PSMA6-209ENST00000554961 C3P01024 1663 aa13.96□□□□□ -0.17
PSMA6-209ENST00000554961 CAMSAP1Q5T5Y3 1602 aa13.96□□□□□ -0.17
PSMA6-209ENST00000554961 CFAP74Q9C0B2 1584 aa13.95□□□□□ -0.18
PSMA6-209ENST00000554961 ALKQ9UM73 1620 aa13.93□□□□□ -0.18
PSMA6-209ENST00000554961 TOM1O60784 492 aa13.93□□□□□ -0.18
PSMA6-209ENST00000554961 KIF27Q86VH2 1401 aa13.92□□□□□ -0.18
PSMA6-209ENST00000554961 HECW1Q76N89 1606 aa13.91□□□□□ -0.18
PSMA6-209ENST00000554961 CARMIL1Q5VZK9 1371 aa13.9□□□□□ -0.18
PSMA6-209ENST00000554961 C9orf84Q5VXU9 1444 aa13.89□□□□□ -0.19
PSMA6-209ENST00000554961 CPS1P31327 1500 aa13.88□□□□□ -0.19
PSMA6-209ENST00000554961 TRAPPC8Q9Y2L5 1435 aa13.88□□□□□ -0.19
PSMA6-209ENST00000554961 POTEAQ6S8J7 498 aa13.87□□□□□ -0.19
PSMA6-209ENST00000554961 ATP10AO60312 1499 aa13.86□□□□□ -0.19
PSMA6-209ENST00000554961 PLA2R1Q13018 1463 aa13.86□□□□□ -0.19
PSMA6-209ENST00000554961 PTPRKQ15262 1439 aa13.85□□□□□ -0.19
PSMA6-209ENST00000554961 ATP10BO94823 1461 aa13.85□□□□□ -0.19
PSMA6-209ENST00000554961 TCOF1Q13428 1488 aaKnown RBP13.85□□□□□ -0.19
PSMA6-209ENST00000554961 ZNF142P52746 1687 aaPredicted RBP13.83□□□□□ -0.2
PSMA6-209ENST00000554961 NCKAP5LQ9HCH0 1330 aa13.82□□□□□ -0.2
PSMA6-209ENST00000554961 GOLGA3Q08378 1498 aa13.8□□□□□ -0.2
PSMA6-209ENST00000554961 UPF1Q92900 1129 aaKnown RBP eCLIP13.8□□□□□ -0.2
PSMA6-209ENST00000554961 RAPGEF2Q9Y4G8 1499 aa13.8□□□□□ -0.2
PSMA6-209ENST00000554961 SUPT6HQ7KZ85 1726 aaKnown RBP13.78□□□□□ -0.2
PSMA6-209ENST00000554961 PKD2Q13563 968 aa13.78□□□□□ -0.2
PSMA6-209ENST00000554961 NPATQ14207 1427 aa13.77□□□□□ -0.21
PSMA6-209ENST00000554961 REREQ9P2R6 1566 aa13.77□□□□□ -0.21
PSMA6-209ENST00000554961 MYO3AQ8NEV4 1616 aa13.76□□□□□ -0.21
PSMA6-209ENST00000554961 SHANK2Q9UPX8 1470 aa13.75□□□□□ -0.21
PSMA6-209ENST00000554961 CTTNBP2Q8WZ74 1663 aa13.75□□□□□ -0.21
PSMA6-209ENST00000554961 RNF17Q9BXT8 1623 aaKnown RBP13.74□□□□□ -0.21
PSMA6-209ENST00000554961 AGLP35573 1532 aa13.74□□□□□ -0.21
PSMA6-209ENST00000554961 MROH2AA6NES4 1674 aa13.73□□□□□ -0.21
PSMA6-209ENST00000554961 CEP170BQ9Y4F5 1589 aaPredicted RBP13.73□□□□□ -0.21
PSMA6-209ENST00000554961 ARID3CA6NKF2 412 aa13.72□□□□□ -0.21
PSMA6-209ENST00000554961 CNTLNQ9NXG0 1405 aa13.71□□□□□ -0.22
PSMA6-209ENST00000554961 POLR1AO95602 1720 aaPredicted RBP13.7□□□□□ -0.22
PSMA6-209ENST00000554961 DIP2CQ9Y2E4 1556 aa13.7□□□□□ -0.22
PSMA6-209ENST00000554961 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.69□□□□□ -0.229e-11■■■■■ 40.7
PSMA6-209ENST00000554961 VWDEQ8N2E2 1590 aa13.69□□□□□ -0.22
PSMA6-209ENST00000554961 NEURL4Q96JN8 1562 aa13.68□□□□□ -0.22
PSMA6-209ENST00000554961 SCAPERQ9BY12 1400 aa13.67□□□□□ -0.22
PSMA6-209ENST00000554961 KDM5CP41229 1560 aa13.66□□□□□ -0.22
PSMA6-209ENST00000554961 SYNMO15061 1565 aa13.65□□□□□ -0.22
PSMA6-209ENST00000554961 LRRC7Q96NW7 1537 aa13.64□□□□□ -0.23
PSMA6-209ENST00000554961 RAPGEF6Q8TEU7 1601 aa13.64□□□□□ -0.23
PSMA6-209ENST00000554961 ABCA6Q8N139 1617 aa13.64□□□□□ -0.23
PSMA6-209ENST00000554961 ESF1Q9H501 851 aaKnown RBP13.63□□□□□ -0.23
PSMA6-209ENST00000554961 ZNF518AQ6AHZ1 1483 aa13.61□□□□□ -0.23
PSMA6-209ENST00000554961 IFFO2Q5TF58 517 aa13.61□□□□□ -0.23
PSMA6-209ENST00000554961 DNMT1P26358 1616 aaKnown RBP13.58□□□□□ -0.24
PSMA6-209ENST00000554961 NUP153P49790 1475 aaKnown RBP13.58□□□□□ -0.24
PSMA6-209ENST00000554961 STRCP1A6NGW2 1772 aa13.57□□□□□ -0.24
PSMA6-209ENST00000554961 SETBP1Q9Y6X0 1596 aa13.56□□□□□ -0.24
PSMA6-209ENST00000554961 ZMYM3Q14202 1370 aa13.54□□□□□ -0.24
PSMA6-209ENST00000554961 PLCH2O75038 1416 aa13.54□□□□□ -0.24
PSMA6-209ENST00000554961 A2ML1A8K2U0 1454 aa13.54□□□□□ -0.24
PSMA6-209ENST00000554961 CDK12Q9NYV4 1490 aaPredicted RBP13.54□□□□□ -0.24
PSMA6-209ENST00000554961 FAM9AQ8IZU1 332 aaPredicted RBP13.53□□□□□ -0.24
PSMA6-209ENST00000554961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.25
PSMA6-209ENST00000554961 HNRNPUL2Q1KMD3 747 aaKnown RBP13.52□□□□□ -0.25
PSMA6-209ENST00000554961 MLH3Q9UHC1 1453 aa13.52□□□□□ -0.25
PSMA6-209ENST00000554961 CLTCQ00610 1675 aaKnown RBP13.51□□□□□ -0.25
PSMA6-209ENST00000554961 CDK13Q14004 1512 aaKnown RBP13.51□□□□□ -0.25
PSMA6-209ENST00000554961 TRIM52Q96A61 297 aa13.51□□□□□ -0.25
PSMA6-209ENST00000554961 MYO5CQ9NQX4 1742 aa13.5□□□□□ -0.25
PSMA6-209ENST00000554961 FAM135BQ49AJ0 1406 aa13.5□□□□□ -0.25
PSMA6-209ENST00000554961 DEPDC5O75140 1603 aa13.5□□□□□ -0.25
PSMA6-209ENST00000554961 MED14O60244 1454 aa13.48□□□□□ -0.25
PSMA6-209ENST00000554961 SAMD9Q5K651 1589 aa13.48□□□□□ -0.25
PSMA6-209ENST00000554961 IQGAP1P46940 1657 aa13.47□□□□□ -0.25
PSMA6-209ENST00000554961 PLEKHD1A6NEE1 506 aa13.47□□□□□ -0.25
PSMA6-209ENST00000554961 ROBO1Q9Y6N7 1651 aa13.47□□□□□ -0.25
PSMA6-209ENST00000554961 LRP5O75197 1615 aa13.46□□□□□ -0.25
PSMA6-209ENST00000554961 XIRP1Q702N8 1843 aaKnown RBP13.46□□□□□ -0.25
PSMA6-209ENST00000554961 ZRANB1Q9UGI0 708 aa13.45□□□□□ -0.26
PSMA6-209ENST00000554961 NPHP4O75161 1426 aaPredicted RBP13.45□□□□□ -0.26
PSMA6-209ENST00000554961 ZNF772Q68DY9 489 aaPredicted RBP13.44□□□□□ -0.26
PSMA6-209ENST00000554961 AFAP1Q8N556 730 aa13.44□□□□□ -0.26
PSMA6-209ENST00000554961 RBM33Q96EV2 1170 aaKnown RBP13.43□□□□□ -0.26
PSMA6-209ENST00000554961 KIDINS220Q9ULH0 1771 aa13.43□□□□□ -0.26
PSMA6-209ENST00000554961 LRP6O75581 1613 aa13.42□□□□□ -0.26
PSMA6-209ENST00000554961 ITSN2Q9NZM3 1697 aa13.42□□□□□ -0.26
PSMA6-209ENST00000554961 EFCAB2Q5VUJ9 269 aa13.41□□□□□ -0.26
PSMA6-209ENST00000554961 ABCC1P33527 1531 aa13.39□□□□□ -0.27
PSMA6-209ENST00000554961 RXRBP28702 533 aa13.39□□□□□ -0.27
PSMA6-209ENST00000554961 P3H3Q8IVL6 736 aa13.39□□□□□ -0.27
PSMA6-209ENST00000554961 MYT1LQ9UL68 1186 aa13.39□□□□□ -0.27
PSMA6-209ENST00000554961 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.39□□□□□ -0.27
PSMA6-209ENST00000554961 JCADQ9P266 1359 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms