RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 MSH5O43196 834 aa22.93■■□□□ 1.26
XRCC3-209ENST00000554913 CDK13Q14004 1512 aaKnown RBP22.93■■□□□ 1.26
XRCC3-209ENST00000554913 PRKRIP1Q9H875 184 aaPredicted RBP22.91■■□□□ 1.26
XRCC3-209ENST00000554913 MIA2Q96PC5 1412 aa22.91■■□□□ 1.26
XRCC3-209ENST00000554913 CCDC7Q96M83 1385 aa22.91■■□□□ 1.26
XRCC3-209ENST00000554913 CDK11AQ9UQ88 783 aaPredicted RBP22.9■■□□□ 1.26
XRCC3-209ENST00000554913 EIF4G3O43432 1585 aaKnown RBP22.9■■□□□ 1.26
XRCC3-209ENST00000554913 NCOA1Q15788 1441 aa22.89■■□□□ 1.26
XRCC3-209ENST00000554913 NBPF8Q3BBV2 869 aa22.89■■□□□ 1.25
XRCC3-209ENST00000554913 FAM9BQ8IZU0 186 aa22.89■■□□□ 1.25
XRCC3-209ENST00000554913 ANKRD30BQ9BXX2 1392 aa22.85■■□□□ 1.25
XRCC3-209ENST00000554913 MRS2Q9HD23 443 aa22.85■■□□□ 1.25
XRCC3-209ENST00000554913 IQGAP2Q13576 1575 aa22.85■■□□□ 1.25
XRCC3-209ENST00000554913 RPRD2Q5VT52 1461 aaKnown RBP22.82■■□□□ 1.24
XRCC3-209ENST00000554913 ERICH6BQ5W0A0 696 aa22.82■■□□□ 1.24
XRCC3-209ENST00000554913 PPP4R2Q9NY27 417 aa22.82■■□□□ 1.24
XRCC3-209ENST00000554913 FANCIQ9NVI1 1328 aa22.81■■□□□ 1.24
XRCC3-209ENST00000554913 ZNF644Q9H582 1327 aaPredicted RBP22.8■■□□□ 1.24
XRCC3-209ENST00000554913 DAPK1P53355 1430 aa22.8■■□□□ 1.24
XRCC3-209ENST00000554913 KIF7Q2M1P5 1343 aa22.8■■□□□ 1.24
XRCC3-209ENST00000554913 TEX14Q8IWB6 1497 aa22.79■■□□□ 1.24
XRCC3-209ENST00000554913 ABCC5O15440 1437 aa22.78■■□□□ 1.24
XRCC3-209ENST00000554913 ROCK1Q13464 1354 aa22.78■■□□□ 1.24
XRCC3-209ENST00000554913 SLC4A1APQ9BWU0 796 aaKnown RBP22.78■■□□□ 1.24
XRCC3-209ENST00000554913 ZBED9Q6R2W3 1325 aa22.77■■□□□ 1.24
XRCC3-209ENST00000554913 SPATA31E1Q6ZUB1 1445 aa22.77■■□□□ 1.24
XRCC3-209ENST00000554913 GRIN2AQ12879 1464 aa22.74■■□□□ 1.23
XRCC3-209ENST00000554913 B4GALNT3Q6L9W6 998 aa22.74■■□□□ 1.23
XRCC3-209ENST00000554913 BCL11AQ9H165 835 aa22.73■■□□□ 1.23
XRCC3-209ENST00000554913 DNMT1P26358 1616 aaKnown RBP22.71■■□□□ 1.23
XRCC3-209ENST00000554913 FBLN2P98095 1184 aa22.69■■□□□ 1.22
XRCC3-209ENST00000554913 KIAA0586Q9BVV6 1533 aa22.68■■□□□ 1.22
XRCC3-209ENST00000554913 CNGB1Q14028 1251 aaPredicted RBP22.68■■□□□ 1.22
XRCC3-209ENST00000554913 CHMP7Q8WUX9 453 aaPredicted RBP22.68■■□□□ 1.22
XRCC3-209ENST00000554913 MAGI1Q96QZ7 1491 aaPredicted RBP22.68■■□□□ 1.22
XRCC3-209ENST00000554913 NUP153P49790 1475 aaKnown RBP22.65■■□□□ 1.22
XRCC3-209ENST00000554913 DISP1Q96F81 1524 aa22.65■■□□□ 1.22
XRCC3-209ENST00000554913 SYNJ2O15056 1496 aa22.64■■□□□ 1.22
XRCC3-209ENST00000554913 ERICH6Q7L0X2 663 aa22.64■■□□□ 1.22
XRCC3-209ENST00000554913 CEP170Q5SW79 1584 aa22.64■■□□□ 1.22
XRCC3-209ENST00000554913 PZPP20742 1482 aa22.64■■□□□ 1.21
XRCC3-209ENST00000554913 POLR1AO95602 1720 aaPredicted RBP22.63■■□□□ 1.21
XRCC3-209ENST00000554913 POLR3GLQ9BT43 218 aa22.62■■□□□ 1.21
XRCC3-209ENST00000554913 DHX29Q7Z478 1369 aaKnown RBP22.62■■□□□ 1.21
XRCC3-209ENST00000554913 ZNF326Q5BKZ1 582 aaKnown RBP22.61■■□□□ 1.21
XRCC3-209ENST00000554913 KIAA0556O60303 1618 aa22.6■■□□□ 1.21
XRCC3-209ENST00000554913 USP47Q96K76 1375 aa22.58■■□□□ 1.2
XRCC3-209ENST00000554913 PRG4Q92954 1404 aaPredicted RBP22.58■■□□□ 1.2
XRCC3-209ENST00000554913 CFDP1Q9UEE9 299 aaPredicted RBP22.58■■□□□ 1.2
XRCC3-209ENST00000554913 MBD5Q9P267 1494 aa22.56■■□□□ 1.2
XRCC3-209ENST00000554913 RAPGEF6Q8TEU7 1601 aa22.56■■□□□ 1.2
XRCC3-209ENST00000554913 BCORL1Q5H9F3 1711 aa22.55■■□□□ 1.2
XRCC3-209ENST00000554913 SMG6Q86US8 1419 aaKnown RBP22.55■■□□□ 1.2
XRCC3-209ENST00000554913 CAMSAP2Q08AD1 1489 aa22.55■■□□□ 1.2
XRCC3-209ENST00000554913 ZNF777Q9ULD5 760 aaPredicted RBP22.55■■□□□ 1.2
XRCC3-209ENST00000554913 SENP3-EIF4A1A0A087X0R7 540 aa22.55■■□□□ 1.2
XRCC3-209ENST00000554913 PKD2Q13563 968 aa22.55■■□□□ 1.2
XRCC3-209ENST00000554913 KIAA1107Q9UPP5 1409 aa22.54■■□□□ 1.2
XRCC3-209ENST00000554913 NUP160Q12769 1436 aa22.53■■□□□ 1.2
XRCC3-209ENST00000554913 NUDCQ9Y266 331 aa22.52■■□□□ 1.2
XRCC3-209ENST00000554913 TROQ12816 1431 aaPredicted RBP22.52■■□□□ 1.2
XRCC3-209ENST00000554913 GPATCH8Q9UKJ3 1502 aaKnown RBP22.5■■□□□ 1.19
XRCC3-209ENST00000554913 JPH4Q96JJ6 628 aa22.49■■□□□ 1.19
XRCC3-209ENST00000554913 RNF123Q5XPI4 1314 aa22.47■■□□□ 1.19
XRCC3-209ENST00000554913 PNISRQ8TF01 805 aaKnown RBP22.46■■□□□ 1.19
XRCC3-209ENST00000554913 KDM5CP41229 1560 aa22.46■■□□□ 1.19
XRCC3-209ENST00000554913 ADGRL2O95490 1459 aa22.45■■□□□ 1.18
XRCC3-209ENST00000554913 PLB1Q6P1J6 1458 aa22.45■■□□□ 1.18
XRCC3-209ENST00000554913 ADGBQ8N7X0 1667 aa22.45■■□□□ 1.18
XRCC3-209ENST00000554913 KIF14Q15058 1648 aa22.44■■□□□ 1.18
XRCC3-209ENST00000554913 ARID4BQ4LE39 1312 aaPredicted RBP22.44■■□□□ 1.18
XRCC3-209ENST00000554913 ANKRD30AQ9BXX3 1397 aa22.44■■□□□ 1.18
XRCC3-209ENST00000554913 TMC1Q8TDI8 760 aa22.43■■□□□ 1.18
XRCC3-209ENST00000554913 CCDC136Q96JN2 1154 aa22.43■■□□□ 1.18
XRCC3-209ENST00000554913 ANKRD50Q9ULJ7 1429 aa22.42■■□□□ 1.18
XRCC3-209ENST00000554913 ITSN2Q9NZM3 1697 aa22.42■■□□□ 1.18
XRCC3-209ENST00000554913 CARD11Q9BXL7 1154 aa22.41■■□□□ 1.18
XRCC3-209ENST00000554913 UHRF1BP1Q6BDS2 1440 aa22.39■■□□□ 1.17
XRCC3-209ENST00000554913 NUP155O75694 1391 aa22.39■■□□□ 1.17
XRCC3-209ENST00000554913 CROCC2H7BZ55 1655 aa22.38■■□□□ 1.17
XRCC3-209ENST00000554913 KDM2AQ9Y2K7 1162 aa22.38■■□□□ 1.17
XRCC3-209ENST00000554913 RALGAPBQ86X10 1494 aa22.38■■□□□ 1.17
XRCC3-209ENST00000554913 ROCK2O75116 1388 aaKnown RBP22.38■■□□□ 1.17
XRCC3-209ENST00000554913 NOP58Q9Y2X3 529 aaKnown RBP22.37■■□□□ 1.17
XRCC3-209ENST00000554913 ST20-MTHFSA0A0A6YYL1 179 aa22.36■■□□□ 1.17
XRCC3-209ENST00000554913 PAK3O75914 559 aaPredicted RBP22.36■■□□□ 1.17
XRCC3-209ENST00000554913 CHD1O14646 1710 aa22.35■■□□□ 1.17
XRCC3-209ENST00000554913 KIF15Q9NS87 1388 aa22.34■■□□□ 1.17
XRCC3-209ENST00000554913 ADCY10Q96PN6 1610 aa22.34■■□□□ 1.17
XRCC3-209ENST00000554913 CARMIL2Q6F5E8 1435 aa22.33■■□□□ 1.16
XRCC3-209ENST00000554913 LRPPRCP42704 1394 aaKnown RBP22.31■■□□□ 1.16
XRCC3-209ENST00000554913 DCAF11Q8TEB1 546 aa22.31■■□□□ 1.16
XRCC3-209ENST00000554913 C9orf84Q5VXU9 1444 aa22.31■■□□□ 1.16
XRCC3-209ENST00000554913 MYBBP1AQ9BQG0 1328 aaKnown RBP22.29■■□□□ 1.16
XRCC3-209ENST00000554913 ARHGEF12Q9NZN5 1544 aa22.29■■□□□ 1.16
XRCC3-209ENST00000554913 PLEKHD1A6NEE1 506 aa22.28■■□□□ 1.16
XRCC3-209ENST00000554913 MYT1LQ9UL68 1186 aa22.28■■□□□ 1.16
XRCC3-209ENST00000554913 BRD4O60885 1362 aaPredicted RBP22.28■■□□□ 1.16
XRCC3-209ENST00000554913 DEKP35659 375 aaKnown RBP22.27■■□□□ 1.16
XRCC3-209ENST00000554913 NBR1Q14596 966 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms