RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 ANO8Q9HCE9 1232 aaPredicted RBP23.11■■□□□ 1.29
PPP4R3A-202ENST00000554390 PRKRIP1Q9H875 184 aaPredicted RBP23.1■■□□□ 1.29
PPP4R3A-202ENST00000554390 EHBP1L1Q8N3D4 1523 aa23.09■■□□□ 1.29
PPP4R3A-202ENST00000554390 CDK13Q14004 1512 aaKnown RBP23.08■■□□□ 1.29
PPP4R3A-202ENST00000554390 ABCA5Q8WWZ7 1642 aa23.07■■□□□ 1.28
PPP4R3A-202ENST00000554390 SLC4A1APQ9BWU0 796 aaKnown RBP23.05■■□□□ 1.28
PPP4R3A-202ENST00000554390 UGGT2Q9NYU1 1516 aa23.05■■□□□ 1.28
PPP4R3A-202ENST00000554390 ZNF777Q9ULD5 760 aaPredicted RBP23.05■■□□□ 1.28
PPP4R3A-202ENST00000554390 KIF7Q2M1P5 1343 aa23.01■■□□□ 1.27
PPP4R3A-202ENST00000554390 CCDC7Q96M83 1385 aa23.01■■□□□ 1.27
PPP4R3A-202ENST00000554390 LAMC3Q9Y6N6 1575 aa23.01■■□□□ 1.27
PPP4R3A-202ENST00000554390 CNTLNQ9NXG0 1405 aa23■■□□□ 1.27
PPP4R3A-202ENST00000554390 SALL2Q9Y467 1007 aaPredicted RBP22.98■■□□□ 1.27
PPP4R3A-202ENST00000554390 THOC2Q8NI27 1593 aaKnown RBP22.96■■□□□ 1.27
PPP4R3A-202ENST00000554390 RTL5Q5HYW3 569 aaPredicted RBP22.96■■□□□ 1.27
PPP4R3A-202ENST00000554390 ZBED9Q6R2W3 1325 aa22.96■■□□□ 1.27
PPP4R3A-202ENST00000554390 IPO9Q96P70 1041 aaKnown RBP22.94■■□□□ 1.26
PPP4R3A-202ENST00000554390 AKNAQ7Z591 1439 aa22.94■■□□□ 1.26
PPP4R3A-202ENST00000554390 ANP32AP39687 249 aaKnown RBP22.93■■□□□ 1.26
PPP4R3A-202ENST00000554390 ARHGEF11O15085 1522 aa22.93■■□□□ 1.26
PPP4R3A-202ENST00000554390 EPRSP07814 1512 aaKnown RBP22.93■■□□□ 1.26
PPP4R3A-202ENST00000554390 PDS5BQ9NTI5 1447 aa22.92■■□□□ 1.26
PPP4R3A-202ENST00000554390 HECW1Q76N89 1606 aa22.91■■□□□ 1.26
PPP4R3A-202ENST00000554390 GCC2Q8IWJ2 1684 aa22.9■■□□□ 1.26
PPP4R3A-202ENST00000554390 KIF21AQ7Z4S6 1674 aa22.9■■□□□ 1.26
PPP4R3A-202ENST00000554390 ZBTB47Q9UFB7 747 aaPredicted RBP22.9■■□□□ 1.26
PPP4R3A-202ENST00000554390 TCOF1Q13428 1488 aaKnown RBP22.89■■□□□ 1.26
PPP4R3A-202ENST00000554390 KDM2AQ9Y2K7 1162 aa22.89■■□□□ 1.25
PPP4R3A-202ENST00000554390 NCOA1Q15788 1441 aa22.88■■□□□ 1.25
PPP4R3A-202ENST00000554390 IL27Q8NEV9 243 aa22.87■■□□□ 1.25
PPP4R3A-202ENST00000554390 ANKRD30BQ9BXX2 1392 aa22.86■■□□□ 1.25
PPP4R3A-202ENST00000554390 IQGAP2Q13576 1575 aa22.85■■□□□ 1.25
PPP4R3A-202ENST00000554390 FBLN2P98095 1184 aa22.83■■□□□ 1.25
PPP4R3A-202ENST00000554390 CCDC136Q96JN2 1154 aa22.83■■□□□ 1.25
PPP4R3A-202ENST00000554390 TARBP1Q13395 1621 aaKnown RBP22.83■■□□□ 1.25
PPP4R3A-202ENST00000554390 PKD2Q13563 968 aa22.8■■□□□ 1.24
PPP4R3A-202ENST00000554390 RTN4Q9NQC3 1192 aaKnown RBP22.8■■□□□ 1.24
PPP4R3A-202ENST00000554390 ABCC5O15440 1437 aa22.79■■□□□ 1.24
PPP4R3A-202ENST00000554390 WDR62O43379 1518 aa22.79■■□□□ 1.24
PPP4R3A-202ENST00000554390 DAPK1P53355 1430 aa22.79■■□□□ 1.24
PPP4R3A-202ENST00000554390 PBRM1Q86U86 1689 aa22.78■■□□□ 1.24
PPP4R3A-202ENST00000554390 MIA2Q96PC5 1412 aa22.78■■□□□ 1.24
PPP4R3A-202ENST00000554390 CFDP1Q9UEE9 299 aaPredicted RBP22.77■■□□□ 1.24
PPP4R3A-202ENST00000554390 RPRD2Q5VT52 1461 aaKnown RBP22.75■■□□□ 1.23
PPP4R3A-202ENST00000554390 TEX14Q8IWB6 1497 aa22.75■■□□□ 1.23
PPP4R3A-202ENST00000554390 SMG6Q86US8 1419 aaKnown RBP22.74■■□□□ 1.23
PPP4R3A-202ENST00000554390 PRG4Q92954 1404 aaPredicted RBP22.74■■□□□ 1.23
PPP4R3A-202ENST00000554390 ADAMTS12P58397 1594 aa22.73■■□□□ 1.23
PPP4R3A-202ENST00000554390 USP47Q96K76 1375 aa22.73■■□□□ 1.23
PPP4R3A-202ENST00000554390 TMC1Q8TDI8 760 aa22.73■■□□□ 1.23
PPP4R3A-202ENST00000554390 NPM2Q86SE8 214 aaKnown RBP22.71■■□□□ 1.23
PPP4R3A-202ENST00000554390 SPATA31E1Q6ZUB1 1445 aa22.71■■□□□ 1.23
PPP4R3A-202ENST00000554390 NUDCQ9Y266 331 aa22.71■■□□□ 1.23
PPP4R3A-202ENST00000554390 RNF123Q5XPI4 1314 aa22.7■■□□□ 1.22
PPP4R3A-202ENST00000554390 ZNF608Q9ULD9 1512 aaPredicted RBP22.7■■□□□ 1.22
PPP4R3A-202ENST00000554390 SKAP1Q86WV1 359 aa22.68■■□□□ 1.22
PPP4R3A-202ENST00000554390 CARD11Q9BXL7 1154 aa22.68■■□□□ 1.22
PPP4R3A-202ENST00000554390 DHX29Q7Z478 1369 aaKnown RBP22.68■■□□□ 1.22
PPP4R3A-202ENST00000554390 ST20-MTHFSA0A0A6YYL1 179 aa22.67■■□□□ 1.22
PPP4R3A-202ENST00000554390 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.65■■□□□ 1.22
PPP4R3A-202ENST00000554390 NUP153P49790 1475 aaKnown RBP22.65■■□□□ 1.22
PPP4R3A-202ENST00000554390 NEFMP07197 916 aa22.65■■□□□ 1.22
PPP4R3A-202ENST00000554390 LAS1LQ9Y4W2 734 aaKnown RBP22.65■■□□□ 1.22
PPP4R3A-202ENST00000554390 RGL3Q3MIN7 710 aa22.64■■□□□ 1.22
PPP4R3A-202ENST00000554390 DCAF11Q8TEB1 546 aa22.64■■□□□ 1.22
PPP4R3A-202ENST00000554390 ROCK1Q13464 1354 aa22.64■■□□□ 1.21
PPP4R3A-202ENST00000554390 DNMT1P26358 1616 aaKnown RBP22.64■■□□□ 1.21
PPP4R3A-202ENST00000554390 BCORL1Q5H9F3 1711 aa22.62■■□□□ 1.21
PPP4R3A-202ENST00000554390 PZPP20742 1482 aa22.62■■□□□ 1.21
PPP4R3A-202ENST00000554390 PNISRQ8TF01 805 aaKnown RBP22.62■■□□□ 1.21
PPP4R3A-202ENST00000554390 DISP1Q96F81 1524 aa22.6■■□□□ 1.21
PPP4R3A-202ENST00000554390 USP35Q9P2H5 1018 aa22.59■■□□□ 1.21
PPP4R3A-202ENST00000554390 KIAA0556O60303 1618 aa22.59■■□□□ 1.21
PPP4R3A-202ENST00000554390 EXOC6Q8TAG9 804 aa22.59■■□□□ 1.21
PPP4R3A-202ENST00000554390 PLB1Q6P1J6 1458 aa22.59■■□□□ 1.21
PPP4R3A-202ENST00000554390 NUP155O75694 1391 aa22.58■■□□□ 1.21
PPP4R3A-202ENST00000554390 PLIN1O60240 522 aa22.57■■□□□ 1.2
PPP4R3A-202ENST00000554390 CAMSAP2Q08AD1 1489 aa22.56■■□□□ 1.2
PPP4R3A-202ENST00000554390 HNRNPMP52272 730 aaKnown RBP eCLIP22.56■■□□□ 1.2
PPP4R3A-202ENST00000554390 MRC2Q9UBG0 1479 aa22.56■■□□□ 1.2
PPP4R3A-202ENST00000554390 CDCA7LQ96GN5 454 aa22.56■■□□□ 1.2
PPP4R3A-202ENST00000554390 WASHC2CQ9Y4E1 1318 aa22.55■■□□□ 1.2
PPP4R3A-202ENST00000554390 RAPGEF6Q8TEU7 1601 aa22.54■■□□□ 1.2
PPP4R3A-202ENST00000554390 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.53■■□□□ 1.22e-7■□□□□ 9.6
PPP4R3A-202ENST00000554390 CC2D1BQ5T0F9 858 aaKnown RBP22.53■■□□□ 1.2
PPP4R3A-202ENST00000554390 CHMP7Q8WUX9 453 aaPredicted RBP22.53■■□□□ 1.2
PPP4R3A-202ENST00000554390 KIAA0586Q9BVV6 1533 aa22.52■■□□□ 1.2
PPP4R3A-202ENST00000554390 PDE4AP27815 886 aa22.51■■□□□ 1.19
PPP4R3A-202ENST00000554390 KIAA1107Q9UPP5 1409 aa22.51■■□□□ 1.19
PPP4R3A-202ENST00000554390 TCERG1O14776 1098 aaKnown RBP22.5■■□□□ 1.19
PPP4R3A-202ENST00000554390 NBPF1Q3BBV0 1214 aa22.5■■□□□ 1.19
PPP4R3A-202ENST00000554390 PPM1GO15355 546 aaPredicted RBP22.49■■□□□ 1.19
PPP4R3A-202ENST00000554390 TROQ12816 1431 aaPredicted RBP22.49■■□□□ 1.19
PPP4R3A-202ENST00000554390 KIF14Q15058 1648 aa22.49■■□□□ 1.19
PPP4R3A-202ENST00000554390 ANKRD50Q9ULJ7 1429 aa22.47■■□□□ 1.19
PPP4R3A-202ENST00000554390 GPATCH8Q9UKJ3 1502 aaKnown RBP22.46■■□□□ 1.19
PPP4R3A-202ENST00000554390 BACH2Q9BYV9 841 aa22.46■■□□□ 1.19
PPP4R3A-202ENST00000554390 GRIN2AQ12879 1464 aa22.46■■□□□ 1.19
PPP4R3A-202ENST00000554390 POLR1AO95602 1720 aaPredicted RBP22.46■■□□□ 1.19
PPP4R3A-202ENST00000554390 BRPF3Q9ULD4 1205 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms