RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 LMTK3Q96Q04 1460 aa13.55□□□□□ -0.24
ACTN1-212ENST00000554158 ZMYM4Q5VZL5 1548 aa13.54□□□□□ -0.24
ACTN1-212ENST00000554158 MAGI2Q86UL8 1455 aa13.53□□□□□ -0.24
ACTN1-212ENST00000554158 MLECQ14165 292 aa13.52□□□□□ -0.25
ACTN1-212ENST00000554158 HECW1Q76N89 1606 aa13.51□□□□□ -0.25
ACTN1-212ENST00000554158 MYT1LQ9UL68 1186 aa13.51□□□□□ -0.25
ACTN1-212ENST00000554158 CDK11AQ9UQ88 783 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-212ENST00000554158 CDK13Q14004 1512 aaKnown RBP13.5□□□□□ -0.25
ACTN1-212ENST00000554158 UBTFP17480 764 aaKnown RBP13.49□□□□□ -0.25
ACTN1-212ENST00000554158 HSPA2P54652 639 aa13.49□□□□□ -0.25
ACTN1-212ENST00000554158 PREX1Q8TCU6 1659 aa13.49□□□□□ -0.25
ACTN1-212ENST00000554158 SCAPERQ9BY12 1400 aa13.48□□□□□ -0.25
ACTN1-212ENST00000554158 KIF14Q15058 1648 aa13.48□□□□□ -0.25
ACTN1-212ENST00000554158 FMN1Q68DA7 1419 aa13.47□□□□□ -0.25
ACTN1-212ENST00000554158 YEATS2Q9ULM3 1422 aa13.47□□□□□ -0.25
ACTN1-212ENST00000554158 SETD1BQ9UPS6 1966 aaKnown RBP13.47□□□□□ -0.25
ACTN1-212ENST00000554158 EFCAB2Q5VUJ9 269 aa13.47□□□□□ -0.25
ACTN1-212ENST00000554158 EHMT2Q96KQ7 1210 aa13.47□□□□□ -0.25
ACTN1-212ENST00000554158 PLCH2O75038 1416 aa13.47□□□□□ -0.25
ACTN1-212ENST00000554158 SIGLEC1Q9BZZ2 1709 aa13.46□□□□□ -0.25
ACTN1-212ENST00000554158 CLIP1P30622 1438 aa13.46□□□□□ -0.26
ACTN1-212ENST00000554158 C9orf84Q5VXU9 1444 aa13.46□□□□□ -0.26
ACTN1-212ENST00000554158 ATP10AO60312 1499 aa13.45□□□□□ -0.26
ACTN1-212ENST00000554158 ARHGAP5Q13017 1502 aa13.44□□□□□ -0.26
ACTN1-212ENST00000554158 ZNF518AQ6AHZ1 1483 aa13.43□□□□□ -0.26
ACTN1-212ENST00000554158 ESF1Q9H501 851 aaKnown RBP13.43□□□□□ -0.26
ACTN1-212ENST00000554158 CERKQ8TCT0 537 aa13.42□□□□□ -0.26
ACTN1-212ENST00000554158 DMRT2Q9Y5R5 561 aa13.41□□□□□ -0.26
ACTN1-212ENST00000554158 ARHGEF12Q9NZN5 1544 aa13.4□□□□□ -0.26
ACTN1-212ENST00000554158 UHRF1BP1Q6BDS2 1440 aa13.39□□□□□ -0.27
ACTN1-212ENST00000554158 CDC42BPBQ9Y5S2 1711 aa13.38□□□□□ -0.27
ACTN1-212ENST00000554158 TROQ12816 1431 aaPredicted RBP13.38□□□□□ -0.27
ACTN1-212ENST00000554158 LRRIQ1Q96JM4 1722 aa13.36□□□□□ -0.27
ACTN1-212ENST00000554158 KDM5CP41229 1560 aa13.36□□□□□ -0.27
ACTN1-212ENST00000554158 ARHGAP35Q9NRY4 1499 aa13.36□□□□□ -0.27
ACTN1-212ENST00000554158 C3P01024 1663 aa13.35□□□□□ -0.27
ACTN1-212ENST00000554158 CEBPAP49715 358 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-212ENST00000554158 PREX2Q70Z35 1606 aa13.35□□□□□ -0.27
ACTN1-212ENST00000554158 STRCQ7RTU9 1775 aa13.35□□□□□ -0.27
ACTN1-212ENST00000554158 ITSN2Q9NZM3 1697 aa13.34□□□□□ -0.27
ACTN1-212ENST00000554158 DIP2CQ9Y2E4 1556 aa13.34□□□□□ -0.27
ACTN1-212ENST00000554158 AFAP1Q8N556 730 aa13.34□□□□□ -0.27
ACTN1-212ENST00000554158 ABCA6Q8N139 1617 aa13.33□□□□□ -0.28
ACTN1-212ENST00000554158 CCDC18Q5T9S5 1454 aa13.33□□□□□ -0.28
ACTN1-212ENST00000554158 REREQ9P2R6 1566 aa13.32□□□□□ -0.28
ACTN1-212ENST00000554158 SUPT6HQ7KZ85 1726 aaKnown RBP13.32□□□□□ -0.28
ACTN1-212ENST00000554158 CDC42BPAQ5VT25 1732 aa13.31□□□□□ -0.28
ACTN1-212ENST00000554158 MLH3Q9UHC1 1453 aa13.29□□□□□ -0.28
ACTN1-212ENST00000554158 ABCC1P33527 1531 aa13.29□□□□□ -0.28
ACTN1-212ENST00000554158 DISP3Q9P2K9 1392 aa13.29□□□□□ -0.28
ACTN1-212ENST00000554158 CNTLNQ9NXG0 1405 aa13.29□□□□□ -0.28
ACTN1-212ENST00000554158 AGLP35573 1532 aa13.28□□□□□ -0.28
ACTN1-212ENST00000554158 KIDINS220Q9ULH0 1771 aa13.27□□□□□ -0.28
ACTN1-212ENST00000554158 ZNF777Q9ULD5 760 aaPredicted RBP13.27□□□□□ -0.29
ACTN1-212ENST00000554158 MROH2AA6NES4 1674 aa13.27□□□□□ -0.29
ACTN1-212ENST00000554158 CASKIN1Q8WXD9 1431 aa13.26□□□□□ -0.29
ACTN1-212ENST00000554158 TRAPPC8Q9Y2L5 1435 aa13.26□□□□□ -0.29
ACTN1-212ENST00000554158 PTPRTO14522 1441 aa13.25□□□□□ -0.29
ACTN1-212ENST00000554158 FYCO1Q9BQS8 1478 aa13.23□□□□□ -0.29
ACTN1-212ENST00000554158 CLTCQ00610 1675 aaKnown RBP13.22□□□□□ -0.29
ACTN1-212ENST00000554158 SPAG9O60271 1321 aaKnown RBP13.22□□□□□ -0.29
ACTN1-212ENST00000554158 SAMD9LQ8IVG5 1584 aa13.22□□□□□ -0.29
ACTN1-212ENST00000554158 SPATA31D1Q6ZQQ2 1576 aa13.21□□□□□ -0.29
ACTN1-212ENST00000554158 SYCP2Q9BX26 1530 aa13.21□□□□□ -0.29
ACTN1-212ENST00000554158 CAMSAP1Q5T5Y3 1602 aa13.21□□□□□ -0.3
ACTN1-212ENST00000554158 PLEKHH2Q8IVE3 1493 aa13.2□□□□□ -0.3
ACTN1-212ENST00000554158 ATP7AQ04656 1500 aa13.19□□□□□ -0.3
ACTN1-212ENST00000554158 ADGBQ8N7X0 1667 aa13.19□□□□□ -0.3
ACTN1-212ENST00000554158 IQSEC2Q5JU85 1478 aa13.19□□□□□ -0.3
ACTN1-212ENST00000554158 NPATQ14207 1427 aa13.19□□□□□ -0.3
ACTN1-212ENST00000554158 NCOA1Q15788 1441 aa13.19□□□□□ -0.3
ACTN1-212ENST00000554158 CFDP1Q9UEE9 299 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-212ENST00000554158 CCNB3Q8WWL7 1395 aa13.18□□□□□ -0.3
ACTN1-212ENST00000554158 MYO3AQ8NEV4 1616 aa13.17□□□□□ -0.3
ACTN1-212ENST00000554158 ZNF142P52746 1687 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-212ENST00000554158 ZMYM3Q14202 1370 aa13.17□□□□□ -0.3
ACTN1-212ENST00000554158 HNRNPMP52272 730 aaKnown RBP eCLIP13.16□□□□□ -0.3
ACTN1-212ENST00000554158 MTUS2Q5JR59 1369 aa13.16□□□□□ -0.3
ACTN1-212ENST00000554158 LTBP4Q8N2S1 1624 aa13.15□□□□□ -0.3
ACTN1-212ENST00000554158 SOCS7O14512 581 aa13.15□□□□□ -0.3
ACTN1-212ENST00000554158 GGT6Q6P531 493 aa13.15□□□□□ -0.3
ACTN1-212ENST00000554158 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.3
ACTN1-212ENST00000554158 A2MP01023 1474 aa13.15□□□□□ -0.3
ACTN1-212ENST00000554158 INO80Q9ULG1 1556 aaPredicted RBP13.15□□□□□ -0.3
ACTN1-212ENST00000554158 GPATCH8Q9UKJ3 1502 aaKnown RBP13.14□□□□□ -0.31
ACTN1-212ENST00000554158 CEP170BQ9Y4F5 1589 aaPredicted RBP13.13□□□□□ -0.31
ACTN1-212ENST00000554158 PKD2Q13563 968 aa13.13□□□□□ -0.31
ACTN1-212ENST00000554158 KIAA1107Q9UPP5 1409 aa13.13□□□□□ -0.31
ACTN1-212ENST00000554158 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
ACTN1-212ENST00000554158 UBAP1LF5GYI3 381 aa13.12□□□□□ -0.31
ACTN1-212ENST00000554158 ILDR2Q71H61 639 aa13.12□□□□□ -0.31
ACTN1-212ENST00000554158 PIAS4Q8N2W9 510 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-212ENST00000554158 PLXNC1O60486 1568 aa13.11□□□□□ -0.31
ACTN1-212ENST00000554158 POLR1AO95602 1720 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-212ENST00000554158 NCBP3Q53F19 620 aaKnown RBP13.11□□□□□ -0.31
ACTN1-212ENST00000554158 PLA2R1Q13018 1463 aa13.1□□□□□ -0.31
ACTN1-212ENST00000554158 SLC4A1APQ9BWU0 796 aaKnown RBP13.09□□□□□ -0.31
ACTN1-212ENST00000554158 ZNF335Q9H4Z2 1342 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-212ENST00000554158 EHBP1L1Q8N3D4 1523 aa13.08□□□□□ -0.31
ACTN1-212ENST00000554158 SCAF1Q9H7N4 1312 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms