RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 ABCC5O15440 1437 aa9.73□□□□□ -0.85
LINC-ROR-201ENST00000553704 MYT1Q01538 1121 aa9.72□□□□□ -0.85
LINC-ROR-201ENST00000553704 IFT140Q96RY7 1462 aa9.72□□□□□ -0.85
LINC-ROR-201ENST00000553704 L3MBTL2Q969R5 705 aa9.71□□□□□ -0.85
LINC-ROR-201ENST00000553704 KIAA0586Q9BVV6 1533 aa9.71□□□□□ -0.86
LINC-ROR-201ENST00000553704 GRIN2AQ12879 1464 aa9.71□□□□□ -0.86
LINC-ROR-201ENST00000553704 RPRD2Q5VT52 1461 aaKnown RBP9.71□□□□□ -0.86
LINC-ROR-201ENST00000553704 CNTLNQ9NXG0 1405 aa9.7□□□□□ -0.86
LINC-ROR-201ENST00000553704 KIF14Q15058 1648 aa9.7□□□□□ -0.86
LINC-ROR-201ENST00000553704 C11orf95C9JLR9 678 aaPredicted RBP9.7□□□□□ -0.86
LINC-ROR-201ENST00000553704 ANKRD30BQ9BXX2 1392 aa9.7□□□□□ -0.86
LINC-ROR-201ENST00000553704 POLR1AO95602 1720 aaPredicted RBP9.7□□□□□ -0.86
LINC-ROR-201ENST00000553704 ROCK1Q13464 1354 aa9.69□□□□□ -0.86
LINC-ROR-201ENST00000553704 CROCC2H7BZ55 1655 aa9.69□□□□□ -0.86
LINC-ROR-201ENST00000553704 ADGBQ8N7X0 1667 aa9.69□□□□□ -0.86
LINC-ROR-201ENST00000553704 CCDC184Q52MB2 194 aa9.69□□□□□ -0.86
LINC-ROR-201ENST00000553704 CEP170Q5SW79 1584 aa9.69□□□□□ -0.86
LINC-ROR-201ENST00000553704 NCOA1Q15788 1441 aa9.69□□□□□ -0.86
LINC-ROR-201ENST00000553704 CAMSAP2Q08AD1 1489 aa9.69□□□□□ -0.86
LINC-ROR-201ENST00000553704 NEFLP07196 543 aa9.69□□□□□ -0.86
LINC-ROR-201ENST00000553704 NBPF8Q3BBV2 869 aa9.69□□□□□ -0.86
LINC-ROR-201ENST00000553704 PRG4Q92954 1404 aaPredicted RBP9.68□□□□□ -0.86
LINC-ROR-201ENST00000553704 EIF4G2P78344 907 aaKnown RBP eCLIP9.68□□□□□ -0.86
LINC-ROR-201ENST00000553704 HNRNPUQ00839 825 aaKnown RBP eCLIP9.68□□□□□ -0.86
LINC-ROR-201ENST00000553704 PZPP20742 1482 aa9.68□□□□□ -0.86
LINC-ROR-201ENST00000553704 ITSN2Q9NZM3 1697 aa9.68□□□□□ -0.86
LINC-ROR-201ENST00000553704 CCDC7Q96M83 1385 aa9.67□□□□□ -0.86
LINC-ROR-201ENST00000553704 PLB1Q6P1J6 1458 aa9.67□□□□□ -0.86
LINC-ROR-201ENST00000553704 ADCY10Q96PN6 1610 aa9.66□□□□□ -0.86
LINC-ROR-201ENST00000553704 TROQ12816 1431 aaPredicted RBP9.65□□□□□ -0.86
LINC-ROR-201ENST00000553704 SPATA31E1Q6ZUB1 1445 aa9.65□□□□□ -0.86
LINC-ROR-201ENST00000553704 IRX6P78412 446 aaPredicted RBP9.65□□□□□ -0.87
LINC-ROR-201ENST00000553704 MBD5Q9P267 1494 aa9.64□□□□□ -0.87
LINC-ROR-201ENST00000553704 GPATCH8Q9UKJ3 1502 aaKnown RBP9.64□□□□□ -0.87
LINC-ROR-201ENST00000553704 BCORL1Q5H9F3 1711 aa9.64□□□□□ -0.87
LINC-ROR-201ENST00000553704 CDC42BPAQ5VT25 1732 aa9.63□□□□□ -0.87
LINC-ROR-201ENST00000553704 SLC4A1APQ9BWU0 796 aaKnown RBP9.63□□□□□ -0.87
LINC-ROR-201ENST00000553704 KIF7Q2M1P5 1343 aa9.62□□□□□ -0.87
LINC-ROR-201ENST00000553704 PRKRIP1Q9H875 184 aaPredicted RBP9.62□□□□□ -0.87
LINC-ROR-201ENST00000553704 ADGRL2O95490 1459 aa9.61□□□□□ -0.87
LINC-ROR-201ENST00000553704 MAGI1Q96QZ7 1491 aaPredicted RBP9.61□□□□□ -0.87
LINC-ROR-201ENST00000553704 RBM19Q9Y4C8 960 aaKnown RBP9.61□□□□□ -0.87
LINC-ROR-201ENST00000553704 SYNJ2O15056 1496 aa9.61□□□□□ -0.87
LINC-ROR-201ENST00000553704 PLPPR3Q6T4P5 718 aa9.6□□□□□ -0.87
LINC-ROR-201ENST00000553704 KDM5CP41229 1560 aa9.59□□□□□ -0.87
LINC-ROR-201ENST00000553704 ANP32EQ9BTT0 268 aa9.59□□□□□ -0.87
LINC-ROR-201ENST00000553704 CFDP1Q9UEE9 299 aaPredicted RBP9.59□□□□□ -0.87
LINC-ROR-201ENST00000553704 ZNF777Q9ULD5 760 aaPredicted RBP9.59□□□□□ -0.87
LINC-ROR-201ENST00000553704 KIAA1107Q9UPP5 1409 aa9.59□□□□□ -0.87
LINC-ROR-201ENST00000553704 FAM9BQ8IZU0 186 aa9.59□□□□□ -0.87
LINC-ROR-201ENST00000553704 CDK11AQ9UQ88 783 aaPredicted RBP9.59□□□□□ -0.87
LINC-ROR-201ENST00000553704 ABCA8O94911 1581 aa9.58□□□□□ -0.88
LINC-ROR-201ENST00000553704 MRS2Q9HD23 443 aa9.58□□□□□ -0.88
LINC-ROR-201ENST00000553704 ERCC6Q03468 1493 aa9.58□□□□□ -0.88
LINC-ROR-201ENST00000553704 NUP160Q12769 1436 aa9.57□□□□□ -0.88
LINC-ROR-201ENST00000553704 DHX29Q7Z478 1369 aaKnown RBP9.57□□□□□ -0.88
LINC-ROR-201ENST00000553704 ABCC10Q5T3U5 1492 aa9.57□□□□□ -0.88
LINC-ROR-201ENST00000553704 CHMP7Q8WUX9 453 aaPredicted RBP9.56□□□□□ -0.88
LINC-ROR-201ENST00000553704 USP47Q96K76 1375 aa9.56□□□□□ -0.88
LINC-ROR-201ENST00000553704 FBLN2P98095 1184 aa9.56□□□□□ -0.88
LINC-ROR-201ENST00000553704 ZNF326Q5BKZ1 582 aaKnown RBP9.56□□□□□ -0.88
LINC-ROR-201ENST00000553704 ANKRD50Q9ULJ7 1429 aa9.56□□□□□ -0.88
LINC-ROR-201ENST00000553704 PKD2Q13563 968 aa9.55□□□□□ -0.88
LINC-ROR-201ENST00000553704 C9orf84Q5VXU9 1444 aa9.55□□□□□ -0.88
LINC-ROR-201ENST00000553704 CNGB1Q14028 1251 aaPredicted RBP9.54□□□□□ -0.88
LINC-ROR-201ENST00000553704 ZBED9Q6R2W3 1325 aa9.54□□□□□ -0.88
LINC-ROR-201ENST00000553704 ANKRD30AQ9BXX3 1397 aa9.54□□□□□ -0.88
LINC-ROR-201ENST00000553704 SHANK2Q9UPX8 1470 aa9.54□□□□□ -0.88
LINC-ROR-201ENST00000553704 CARMIL2Q6F5E8 1435 aa9.54□□□□□ -0.88
LINC-ROR-201ENST00000553704 ATP10BO94823 1461 aa9.54□□□□□ -0.88
LINC-ROR-201ENST00000553704 KDM5DQ9BY66 1539 aa9.53□□□□□ -0.88
LINC-ROR-201ENST00000553704 RALGAPBQ86X10 1494 aa9.53□□□□□ -0.88
LINC-ROR-201ENST00000553704 JPH4Q96JJ6 628 aa9.52□□□□□ -0.88
LINC-ROR-201ENST00000553704 MSH5O43196 834 aa9.52□□□□□ -0.89
LINC-ROR-201ENST00000553704 POLR3GLQ9BT43 218 aa9.52□□□□□ -0.89
LINC-ROR-201ENST00000553704 CDC42BPBQ9Y5S2 1711 aa9.52□□□□□ -0.89
LINC-ROR-201ENST00000553704 SAMD9LQ8IVG5 1584 aa9.52□□□□□ -0.89
LINC-ROR-201ENST00000553704 UHRF1BP1Q6BDS2 1440 aa9.51□□□□□ -0.89
LINC-ROR-201ENST00000553704 E9PCH4 1651 aa9.51□□□□□ -0.89
LINC-ROR-201ENST00000553704 NUP155O75694 1391 aa9.51□□□□□ -0.89
LINC-ROR-201ENST00000553704 ARHGEF12Q9NZN5 1544 aa9.51□□□□□ -0.89
LINC-ROR-201ENST00000553704 SENP3-EIF4A1A0A087X0R7 540 aa9.51□□□□□ -0.89
LINC-ROR-201ENST00000553704 PREX2Q70Z35 1606 aa9.5□□□□□ -0.89
LINC-ROR-201ENST00000553704 ARHGEF5Q12774 1597 aa9.5□□□□□ -0.89
LINC-ROR-201ENST00000553704 PTPRGP23470 1445 aa9.49□□□□□ -0.89
LINC-ROR-201ENST00000553704 KIF15Q9NS87 1388 aa9.49□□□□□ -0.89
LINC-ROR-201ENST00000553704 B4GALNT3Q6L9W6 998 aa9.49□□□□□ -0.89
LINC-ROR-201ENST00000553704 PPP4R2Q9NY27 417 aa9.49□□□□□ -0.89
LINC-ROR-201ENST00000553704 PLEKHD1A6NEE1 506 aa9.48□□□□□ -0.89
LINC-ROR-201ENST00000553704 HNRNPMP52272 730 aaKnown RBP eCLIP9.48□□□□□ -0.89
LINC-ROR-201ENST00000553704 TTC37Q6PGP7 1564 aa9.47□□□□□ -0.89
LINC-ROR-201ENST00000553704 FAM135AQ9P2D6 1515 aa9.47□□□□□ -0.89
LINC-ROR-201ENST00000553704 SMG6Q86US8 1419 aaKnown RBP9.47□□□□□ -0.89
LINC-ROR-201ENST00000553704 TRPM1Q7Z4N2 1603 aa9.47□□□□□ -0.89
LINC-ROR-201ENST00000553704 SYCP2Q9BX26 1530 aa9.46□□□□□ -0.89
LINC-ROR-201ENST00000553704 CCDC141Q6ZP82 1450 aa9.46□□□□□ -0.9
LINC-ROR-201ENST00000553704 ERICH6BQ5W0A0 696 aa9.46□□□□□ -0.9
LINC-ROR-201ENST00000553704 CARD11Q9BXL7 1154 aa9.46□□□□□ -0.9
LINC-ROR-201ENST00000553704 KDM2AQ9Y2K7 1162 aa9.46□□□□□ -0.9
LINC-ROR-201ENST00000553704 CHD1O14646 1710 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms