RNA–Protein interactions for RNA: ENST00000553681.5

APEX1-206, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-206ENST00000553681 KIF14Q15058 1648 aa18.73■□□□□ 0.59
APEX1-206ENST00000553681 ZMYM4Q5VZL5 1548 aa18.73■□□□□ 0.59
APEX1-206ENST00000553681 FER1L4A9Z1Z3 1794 aa18.71■□□□□ 0.59
APEX1-206ENST00000553681 ARHGAP35Q9NRY4 1499 aa18.71■□□□□ 0.59
APEX1-206ENST00000553681 POGZQ7Z3K3 1410 aa18.7■□□□□ 0.58
APEX1-206ENST00000553681 PLCH2O75038 1416 aa18.69■□□□□ 0.58
APEX1-206ENST00000553681 CEBPAP49715 358 aaPredicted RBP18.69■□□□□ 0.58
APEX1-206ENST00000553681 LRRIQ1Q96JM4 1722 aa18.69■□□□□ 0.58
APEX1-206ENST00000553681 MYO5CQ9NQX4 1742 aa18.69■□□□□ 0.58
APEX1-206ENST00000553681 MYT1LQ9UL68 1186 aa18.66■□□□□ 0.58
APEX1-206ENST00000553681 AFAP1Q8N556 730 aa18.64■□□□□ 0.57
APEX1-206ENST00000553681 ARHGAP5Q13017 1502 aa18.64■□□□□ 0.57
APEX1-206ENST00000553681 CHIC1Q5VXU3 224 aa18.63■□□□□ 0.57
APEX1-206ENST00000553681 EFCAB2Q5VUJ9 269 aa18.62■□□□□ 0.57
APEX1-206ENST00000553681 FMN1Q68DA7 1419 aa18.62■□□□□ 0.57
APEX1-206ENST00000553681 ATP10AO60312 1499 aa18.61■□□□□ 0.57
APEX1-206ENST00000553681 MAGI2Q86UL8 1455 aa18.61■□□□□ 0.57
APEX1-206ENST00000553681 C9orf84Q5VXU9 1444 aa18.6■□□□□ 0.57
APEX1-206ENST00000553681 ARHGEF12Q9NZN5 1544 aa18.59■□□□□ 0.57
APEX1-206ENST00000553681 TROQ12816 1431 aaPredicted RBP18.58■□□□□ 0.57
APEX1-206ENST00000553681 CDC42BPBQ9Y5S2 1711 aa18.57■□□□□ 0.56
APEX1-206ENST00000553681 CDK11AQ9UQ88 783 aaPredicted RBP18.56■□□□□ 0.56
APEX1-206ENST00000553681 DIP2CQ9Y2E4 1556 aa18.55■□□□□ 0.56
APEX1-206ENST00000553681 ABCA6Q8N139 1617 aa18.54■□□□□ 0.56
APEX1-206ENST00000553681 CLIP1P30622 1438 aa18.54■□□□□ 0.56
APEX1-206ENST00000553681 ZNF518AQ6AHZ1 1483 aa18.53■□□□□ 0.56
APEX1-206ENST00000553681 CERKQ8TCT0 537 aa18.53■□□□□ 0.56
APEX1-206ENST00000553681 TRAPPC8Q9Y2L5 1435 aa18.53■□□□□ 0.56
APEX1-206ENST00000553681 PREX1Q8TCU6 1659 aa18.53■□□□□ 0.56
APEX1-206ENST00000553681 KDM5CP41229 1560 aa18.52■□□□□ 0.56
APEX1-206ENST00000553681 PREX2Q70Z35 1606 aa18.49■□□□□ 0.55
APEX1-206ENST00000553681 ZNF777Q9ULD5 760 aaPredicted RBP18.49■□□□□ 0.55
APEX1-206ENST00000553681 STRCQ7RTU9 1775 aa18.49■□□□□ 0.55
APEX1-206ENST00000553681 ITSN2Q9NZM3 1697 aa18.48■□□□□ 0.55
APEX1-206ENST00000553681 ABCC1P33527 1531 aa18.47■□□□□ 0.55
APEX1-206ENST00000553681 C3P01024 1663 aa18.47■□□□□ 0.55
APEX1-206ENST00000553681 CDC42BPAQ5VT25 1732 aa18.46■□□□□ 0.55
APEX1-206ENST00000553681 UHRF1BP1Q6BDS2 1440 aa18.44■□□□□ 0.54
APEX1-206ENST00000553681 CASKIN1Q8WXD9 1431 aa18.44■□□□□ 0.54
APEX1-206ENST00000553681 KIDINS220Q9ULH0 1771 aa18.44■□□□□ 0.54
APEX1-206ENST00000553681 MLH3Q9UHC1 1453 aa18.41■□□□□ 0.54
APEX1-206ENST00000553681 ESF1Q9H501 851 aaKnown RBP18.41■□□□□ 0.54
APEX1-206ENST00000553681 CCDC18Q5T9S5 1454 aa18.4■□□□□ 0.54
APEX1-206ENST00000553681 SYCP2Q9BX26 1530 aa18.4■□□□□ 0.54
APEX1-206ENST00000553681 SAMD9LQ8IVG5 1584 aa18.4■□□□□ 0.54
APEX1-206ENST00000553681 HNRNPMP52272 730 aaKnown RBP eCLIP18.4■□□□□ 0.54
APEX1-206ENST00000553681 SUPT6HQ7KZ85 1726 aaKnown RBP18.39■□□□□ 0.53
APEX1-206ENST00000553681 SETD1BQ9UPS6 1966 aaKnown RBP18.38■□□□□ 0.53
APEX1-206ENST00000553681 REREQ9P2R6 1566 aa18.38■□□□□ 0.53
APEX1-206ENST00000553681 FYCO1Q9BQS8 1478 aa18.35■□□□□ 0.53
APEX1-206ENST00000553681 AGLP35573 1532 aa18.34■□□□□ 0.53
APEX1-206ENST00000553681 GPATCH8Q9UKJ3 1502 aaKnown RBP18.33■□□□□ 0.53
APEX1-206ENST00000553681 SPAG9O60271 1321 aaKnown RBP18.32■□□□□ 0.52
APEX1-206ENST00000553681 ILDR2Q71H61 639 aa18.31■□□□□ 0.52
APEX1-206ENST00000553681 CLTCQ00610 1675 aaKnown RBP18.31■□□□□ 0.52
APEX1-206ENST00000553681 DISP3Q9P2K9 1392 aa18.3■□□□□ 0.52
APEX1-206ENST00000553681 ZNF644Q9H582 1327 aaPredicted RBP18.3■□□□□ 0.52
APEX1-206ENST00000553681 DMRT2Q9Y5R5 561 aa18.3■□□□□ 0.52
APEX1-206ENST00000553681 NCKAP5LQ9HCH0 1330 aa18.29■□□□□ 0.52
APEX1-206ENST00000553681 CFDP1Q9UEE9 299 aaPredicted RBP18.29■□□□□ 0.52
APEX1-206ENST00000553681 ATP7AQ04656 1500 aa18.28■□□□□ 0.52
APEX1-206ENST00000553681 CAMSAP1Q5T5Y3 1602 aa18.28■□□□□ 0.52
APEX1-206ENST00000553681 GGT6Q6P531 493 aa18.28■□□□□ 0.52
APEX1-206ENST00000553681 CCNB3Q8WWL7 1395 aa18.28■□□□□ 0.52
APEX1-206ENST00000553681 NCOA1Q15788 1441 aa18.27■□□□□ 0.52
APEX1-206ENST00000553681 ZMYM3Q14202 1370 aa18.27■□□□□ 0.51
APEX1-206ENST00000553681 PTPRTO14522 1441 aa18.26■□□□□ 0.51
APEX1-206ENST00000553681 LTBP4Q8N2S1 1624 aa18.26■□□□□ 0.51
APEX1-206ENST00000553681 INO80Q9ULG1 1556 aaPredicted RBP18.25■□□□□ 0.51
APEX1-206ENST00000553681 CNTLNQ9NXG0 1405 aa18.25■□□□□ 0.51
APEX1-206ENST00000553681 MTUS2Q5JR59 1369 aa18.25■□□□□ 0.51
APEX1-206ENST00000553681 A2MP01023 1474 aa18.24■□□□□ 0.51
APEX1-206ENST00000553681 ZNF335Q9H4Z2 1342 aaPredicted RBP18.23■□□□□ 0.51
APEX1-206ENST00000553681 MROH2AA6NES4 1674 aa18.23■□□□□ 0.51
APEX1-206ENST00000553681 MYO3AQ8NEV4 1616 aa18.22■□□□□ 0.51
APEX1-206ENST00000553681 PLXNC1O60486 1568 aa18.21■□□□□ 0.51
APEX1-206ENST00000553681 TIAM1Q13009 1591 aa18.21■□□□□ 0.51
APEX1-206ENST00000553681 NPATQ14207 1427 aa18.18■□□□□ 0.5
APEX1-206ENST00000553681 PTPRKQ15262 1439 aa18.18■□□□□ 0.5
APEX1-206ENST00000553681 SPATA31D1Q6ZQQ2 1576 aa18.17■□□□□ 0.5
APEX1-206ENST00000553681 KIAA1107Q9UPP5 1409 aa18.17■□□□□ 0.5
APEX1-206ENST00000553681 CEP170BQ9Y4F5 1589 aaPredicted RBP18.17■□□□□ 0.5
APEX1-206ENST00000553681 PLEKHH2Q8IVE3 1493 aa18.16■□□□□ 0.5
APEX1-206ENST00000553681 ZNF142P52746 1687 aaPredicted RBP18.15■□□□□ 0.5
APEX1-206ENST00000553681 ADGBQ8N7X0 1667 aa18.15■□□□□ 0.5
APEX1-206ENST00000553681 FBXO31Q5XUX0 539 aaPredicted RBP18.14■□□□□ 0.49
APEX1-206ENST00000553681 MBD5Q9P267 1494 aa18.14■□□□□ 0.49
APEX1-206ENST00000553681 EHBP1L1Q8N3D4 1523 aa18.13■□□□□ 0.49
APEX1-206ENST00000553681 UBAP1LF5GYI3 381 aa18.13■□□□□ 0.49
APEX1-206ENST00000553681 KIF3BO15066 747 aa18.11■□□□□ 0.49
APEX1-206ENST00000553681 CEP162Q5TB80 1403 aa18.11■□□□□ 0.49
APEX1-206ENST00000553681 CAMSAP2Q08AD1 1489 aa18.08■□□□□ 0.49
APEX1-206ENST00000553681 SCAF1Q9H7N4 1312 aaKnown RBP18.08■□□□□ 0.49
APEX1-206ENST00000553681 PPP6R1Q9UPN7 881 aa18.08■□□□□ 0.48
APEX1-206ENST00000553681 DNMT1P26358 1616 aaKnown RBP18.08■□□□□ 0.48
APEX1-206ENST00000553681 TCOF1Q13428 1488 aaKnown RBP18.07■□□□□ 0.48
APEX1-206ENST00000553681 PLA2R1Q13018 1463 aa18.07■□□□□ 0.48
APEX1-206ENST00000553681 NCOA2Q15596 1464 aa18.07■□□□□ 0.48
APEX1-206ENST00000553681 DHX29Q7Z478 1369 aaKnown RBP18.05■□□□□ 0.48
APEX1-206ENST00000553681 SOCS7O14512 581 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms