RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 STAG3Q9UJ98 1225 aa7.49□□□□□ -1.21
TMEM55B-204ENST00000553602 OSCARQ8IYS5 282 aa7.48□□□□□ -1.21
TMEM55B-204ENST00000553602 URB2Q14146 1524 aaKnown RBP7.47□□□□□ -1.21
TMEM55B-204ENST00000553602 KDM5BQ9UGL1 1544 aa7.47□□□□□ -1.21
TMEM55B-204ENST00000553602 LRRIQ1Q96JM4 1722 aa7.47□□□□□ -1.21
TMEM55B-204ENST00000553602 PPP1R15AO75807 674 aaPredicted RBP7.47□□□□□ -1.21
TMEM55B-204ENST00000553602 SSUH2Q9Y2M2 353 aa7.47□□□□□ -1.21
TMEM55B-204ENST00000553602 NCOA2Q15596 1464 aa7.47□□□□□ -1.21
TMEM55B-204ENST00000553602 RAD54L2Q9Y4B4 1467 aa7.47□□□□□ -1.21
TMEM55B-204ENST00000553602 NAIPQ13075 1403 aa7.46□□□□□ -1.21
TMEM55B-204ENST00000553602 MIA2Q96PC5 1412 aa7.45□□□□□ -1.22
TMEM55B-204ENST00000553602 GAPVD1Q14C86 1478 aa7.45□□□□□ -1.22
TMEM55B-204ENST00000553602 KLHL34Q8N239 644 aa7.45□□□□□ -1.22
TMEM55B-204ENST00000553602 TARBP1Q13395 1621 aaKnown RBP7.45□□□□□ -1.22
TMEM55B-204ENST00000553602 MTUS2Q5JR59 1369 aa7.45□□□□□ -1.22
TMEM55B-204ENST00000553602 PLCB2Q00722 1185 aa7.44□□□□□ -1.22
TMEM55B-204ENST00000553602 PKD2Q13563 968 aa7.44□□□□□ -1.22
TMEM55B-204ENST00000553602 SPOCK2Q92563 424 aa7.44□□□□□ -1.22
TMEM55B-204ENST00000553602 PDS5BQ9NTI5 1447 aa7.44□□□□□ -1.22
TMEM55B-204ENST00000553602 ADAMTS12P58397 1594 aa7.43□□□□□ -1.22
TMEM55B-204ENST00000553602 FAM50AQ14320 339 aaKnown RBP7.43□□□□□ -1.22
TMEM55B-204ENST00000553602 TONSLQ96HA7 1378 aa7.43□□□□□ -1.22
TMEM55B-204ENST00000553602 IQGAP2Q13576 1575 aa7.42□□□□□ -1.22
TMEM55B-204ENST00000553602 PLCD3Q8N3E9 789 aa7.42□□□□□ -1.22
TMEM55B-204ENST00000553602 PTPRKQ15262 1439 aa7.42□□□□□ -1.22
TMEM55B-204ENST00000553602 WDR62O43379 1518 aa7.42□□□□□ -1.22
TMEM55B-204ENST00000553602 PBRM1Q86U86 1689 aa7.41□□□□□ -1.22
TMEM55B-204ENST00000553602 MAGI3Q5TCQ9 1506 aa7.41□□□□□ -1.22
TMEM55B-204ENST00000553602 NESP48681 1621 aa7.41□□□□□ -1.22
TMEM55B-204ENST00000553602 ITGAEP38570 1179 aa7.4□□□□□ -1.22
TMEM55B-204ENST00000553602 ROCK1Q13464 1354 aa7.4□□□□□ -1.22
TMEM55B-204ENST00000553602 POLR1AO95602 1720 aaPredicted RBP7.39□□□□□ -1.23
TMEM55B-204ENST00000553602 EPRSP07814 1512 aaKnown RBP7.39□□□□□ -1.23
TMEM55B-204ENST00000553602 TSHZ2Q9NRE2 1034 aa7.39□□□□□ -1.23
TMEM55B-204ENST00000553602 DNMT1P26358 1616 aaKnown RBP7.38□□□□□ -1.23
TMEM55B-204ENST00000553602 DENND4BO75064 1496 aaPredicted RBP7.38□□□□□ -1.23
TMEM55B-204ENST00000553602 ANP32CO43423 234 aa7.38□□□□□ -1.23
TMEM55B-204ENST00000553602 SIN3AQ96ST3 1273 aa7.38□□□□□ -1.23
TMEM55B-204ENST00000553602 ERICH6BQ5W0A0 696 aa7.37□□□□□ -1.23
TMEM55B-204ENST00000553602 NEFLP07196 543 aa7.36□□□□□ -1.23
TMEM55B-204ENST00000553602 DDX10Q13206 875 aaKnown RBP7.36□□□□□ -1.23
TMEM55B-204ENST00000553602 RPRD2Q5VT52 1461 aaKnown RBP7.36□□□□□ -1.23
TMEM55B-204ENST00000553602 TEX14Q8IWB6 1497 aa7.36□□□□□ -1.23
TMEM55B-204ENST00000553602 CNTLNQ9NXG0 1405 aa7.35□□□□□ -1.23
TMEM55B-204ENST00000553602 ECM2O94769 699 aaPredicted RBP7.35□□□□□ -1.23
TMEM55B-204ENST00000553602 PLEKHG5O94827 1062 aa7.35□□□□□ -1.23
TMEM55B-204ENST00000553602 NCOA1Q15788 1441 aa7.35□□□□□ -1.23
TMEM55B-204ENST00000553602 KIAA0556O60303 1618 aa7.34□□□□□ -1.23
TMEM55B-204ENST00000553602 ADCY10Q96PN6 1610 aa7.34□□□□□ -1.23
TMEM55B-204ENST00000553602 ZBTB47Q9UFB7 747 aaPredicted RBP7.34□□□□□ -1.23
TMEM55B-204ENST00000553602 MRC2Q9UBG0 1479 aa7.34□□□□□ -1.23
TMEM55B-204ENST00000553602 ITSN2Q9NZM3 1697 aa7.34□□□□□ -1.23
TMEM55B-204ENST00000553602 TDRD9Q8NDG6 1382 aaKnown RBP7.33□□□□□ -1.24
TMEM55B-204ENST00000553602 KIAA0586Q9BVV6 1533 aa7.33□□□□□ -1.24
TMEM55B-204ENST00000553602 ADGBQ8N7X0 1667 aa7.33□□□□□ -1.24
TMEM55B-204ENST00000553602 ADGRL2O95490 1459 aa7.33□□□□□ -1.24
TMEM55B-204ENST00000553602 HAP1P54257 671 aaPredicted RBP7.33□□□□□ -1.24
TMEM55B-204ENST00000553602 P3H3Q8IVL6 736 aa7.33□□□□□ -1.24
TMEM55B-204ENST00000553602 KCNH8Q96L42 1107 aa7.33□□□□□ -1.24
TMEM55B-204ENST00000553602 DAPK1P53355 1430 aa7.33□□□□□ -1.24
TMEM55B-204ENST00000553602 IFT140Q96RY7 1462 aa7.32□□□□□ -1.24
TMEM55B-204ENST00000553602 RAPGEF6Q8TEU7 1601 aa7.32□□□□□ -1.24
TMEM55B-204ENST00000553602 ANP32EQ9BTT0 268 aa7.32□□□□□ -1.24
TMEM55B-204ENST00000553602 CROCC2H7BZ55 1655 aa7.32□□□□□ -1.24
TMEM55B-204ENST00000553602 MBD5Q9P267 1494 aa7.31□□□□□ -1.24
TMEM55B-204ENST00000553602 KDM6BO15054 1643 aa7.31□□□□□ -1.24
TMEM55B-204ENST00000553602 ANKRD30BQ9BXX2 1392 aa7.31□□□□□ -1.24
TMEM55B-204ENST00000553602 SPATA31E1Q6ZUB1 1445 aa7.3□□□□□ -1.24
TMEM55B-204ENST00000553602 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.3□□□□□ -1.24
TMEM55B-204ENST00000553602 CDK13Q14004 1512 aaKnown RBP7.3□□□□□ -1.24
TMEM55B-204ENST00000553602 DISP1Q96F81 1524 aa7.3□□□□□ -1.24
TMEM55B-204ENST00000553602 KIF14Q15058 1648 aa7.3□□□□□ -1.24
TMEM55B-204ENST00000553602 NUP153P49790 1475 aaKnown RBP7.3□□□□□ -1.24
TMEM55B-204ENST00000553602 SHANK2Q9UPX8 1470 aa7.3□□□□□ -1.24
TMEM55B-204ENST00000553602 ABCC5O15440 1437 aa7.29□□□□□ -1.24
TMEM55B-204ENST00000553602 KDM5DQ9BY66 1539 aa7.29□□□□□ -1.24
TMEM55B-204ENST00000553602 ARHGEF12Q9NZN5 1544 aa7.29□□□□□ -1.24
TMEM55B-204ENST00000553602 EIF4G2P78344 907 aaKnown RBP eCLIP7.29□□□□□ -1.24
TMEM55B-204ENST00000553602 ATP1B4Q9UN42 357 aaPredicted RBP7.29□□□□□ -1.24
TMEM55B-204ENST00000553602 CCDC7Q96M83 1385 aa7.29□□□□□ -1.24
TMEM55B-204ENST00000553602 WASHC2AQ641Q2 1341 aa7.28□□□□□ -1.24
TMEM55B-204ENST00000553602 BBXQ8WY36 941 aaPredicted RBP7.28□□□□□ -1.24
TMEM55B-204ENST00000553602 ARID4BQ4LE39 1312 aaPredicted RBP7.27□□□□□ -1.24
TMEM55B-204ENST00000553602 TROQ12816 1431 aaPredicted RBP7.27□□□□□ -1.24
TMEM55B-204ENST00000553602 PZPP20742 1482 aa7.27□□□□□ -1.25
TMEM55B-204ENST00000553602 GRIN2AQ12879 1464 aa7.27□□□□□ -1.25
TMEM55B-204ENST00000553602 MAGI1Q96QZ7 1491 aaPredicted RBP7.27□□□□□ -1.25
TMEM55B-204ENST00000553602 FANCIQ9NVI1 1328 aa7.27□□□□□ -1.25
TMEM55B-204ENST00000553602 HSPA5P11021 654 aaKnown RBP7.26□□□□□ -1.25
TMEM55B-204ENST00000553602 MPHOSPH9Q99550 1183 aa7.26□□□□□ -1.25
TMEM55B-204ENST00000553602 CIZ1Q9ULV3 898 aaPredicted RBP7.26□□□□□ -1.25
TMEM55B-204ENST00000553602 UHRF1BP1Q6BDS2 1440 aa7.26□□□□□ -1.25
TMEM55B-204ENST00000553602 ZBED9Q6R2W3 1325 aa7.26□□□□□ -1.25
TMEM55B-204ENST00000553602 CAMSAP2Q08AD1 1489 aa7.25□□□□□ -1.25
TMEM55B-204ENST00000553602 RGL2O15211 777 aa7.25□□□□□ -1.25
TMEM55B-204ENST00000553602 KIAA1107Q9UPP5 1409 aa7.25□□□□□ -1.25
TMEM55B-204ENST00000553602 EIF4G3O43432 1585 aaKnown RBP7.25□□□□□ -1.25
TMEM55B-204ENST00000553602 RALGAPBQ86X10 1494 aa7.24□□□□□ -1.25
TMEM55B-204ENST00000553602 ROCK2O75116 1388 aaKnown RBP7.24□□□□□ -1.25
TMEM55B-204ENST00000553602 CDK11AQ9UQ88 783 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms