RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 GALR2O43603 387 aaPredicted RBP11.1□□□□□ -0.63
ATXN3-221ENST00000553498 PPARGC1BQ86YN6 1023 aaKnown RBP11.1□□□□□ -0.63
ATXN3-221ENST00000553498 THOC2Q8NI27 1593 aaKnown RBP11.09□□□□□ -0.63
ATXN3-221ENST00000553498 DCAF8Q5TAQ9 597 aa11.09□□□□□ -0.63
ATXN3-221ENST00000553498 ADAMTS12P58397 1594 aa11.08□□□□□ -0.64
ATXN3-221ENST00000553498 MAGI1Q96QZ7 1491 aaPredicted RBP11.07□□□□□ -0.64
ATXN3-221ENST00000553498 FYCO1Q9BQS8 1478 aa11.07□□□□□ -0.64
ATXN3-221ENST00000553498 CASKIN1Q8WXD9 1431 aa11.07□□□□□ -0.64
ATXN3-221ENST00000553498 MS4A3Q96HJ5 214 aa11.06□□□□□ -0.64
ATXN3-221ENST00000553498 MAP3K13O43283 966 aa11.05□□□□□ -0.64
ATXN3-221ENST00000553498 POTEIP0CG38 1075 aa11.05□□□□□ -0.64
ATXN3-221ENST00000553498 ZNF608Q9ULD9 1512 aaPredicted RBP11.04□□□□□ -0.64
ATXN3-221ENST00000553498 GSE1Q14687 1217 aa11.04□□□□□ -0.64
ATXN3-221ENST00000553498 CTTNBP2Q8WZ74 1663 aa11.04□□□□□ -0.64
ATXN3-221ENST00000553498 KIAA0586Q9BVV6 1533 aa11.04□□□□□ -0.64
ATXN3-221ENST00000553498 SAMD9Q5K651 1589 aa11.03□□□□□ -0.64
ATXN3-221ENST00000553498 PBRM1Q86U86 1689 aa11.03□□□□□ -0.64
ATXN3-221ENST00000553498 RRBP1Q9P2E9 1410 aaKnown RBP11.02□□□□□ -0.64
ATXN3-221ENST00000553498 TIAM1Q13009 1591 aa11.02□□□□□ -0.65
ATXN3-221ENST00000553498 FHOD3Q2V2M9 1422 aa11.01□□□□□ -0.65
ATXN3-221ENST00000553498 SYNJ2O15056 1496 aa11.01□□□□□ -0.65
ATXN3-221ENST00000553498 SNAPC4Q5SXM2 1469 aa11.01□□□□□ -0.65
ATXN3-221ENST00000553498 EIF4G3O43432 1585 aaKnown RBP11.01□□□□□ -0.65
ATXN3-221ENST00000553498 GRIN2AQ12879 1464 aa11□□□□□ -0.65
ATXN3-221ENST00000553498 LRRC9Q6ZRR7 1453 aa11□□□□□ -0.65
ATXN3-221ENST00000553498 UGGT2Q9NYU1 1516 aa11□□□□□ -0.65
ATXN3-221ENST00000553498 IQGAP2Q13576 1575 aa11□□□□□ -0.65
ATXN3-221ENST00000553498 PYGBP11216 843 aa11□□□□□ -0.65
ATXN3-221ENST00000553498 KANK4Q5T7N3 995 aaPredicted RBP11□□□□□ -0.65
ATXN3-221ENST00000553498 SGIP1Q9BQI5 828 aa11□□□□□ -0.65
ATXN3-221ENST00000553498 CHRM1P11229 460 aaPredicted RBP10.99□□□□□ -0.65
ATXN3-221ENST00000553498 TRPC6Q9Y210 931 aa10.98□□□□□ -0.65
ATXN3-221ENST00000553498 TTBK1Q5TCY1 1321 aaPredicted RBP10.98□□□□□ -0.65
ATXN3-221ENST00000553498 CHMP7Q8WUX9 453 aaPredicted RBP10.97□□□□□ -0.65
ATXN3-221ENST00000553498 CIZ1Q9ULV3 898 aaPredicted RBP10.97□□□□□ -0.65
ATXN3-221ENST00000553498 PCDHB13Q9Y5F0 798 aa10.97□□□□□ -0.65
ATXN3-221ENST00000553498 CCNB3Q8WWL7 1395 aa10.97□□□□□ -0.65
ATXN3-221ENST00000553498 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.97□□□□□ -0.65
ATXN3-221ENST00000553498 PCF11O94913 1555 aaKnown RBP10.96□□□□□ -0.65
ATXN3-221ENST00000553498 CCDC18Q5T9S5 1454 aa10.96□□□□□ -0.65
ATXN3-221ENST00000553498 IFNL1Q8IU54 200 aa10.96□□□□□ -0.65
ATXN3-221ENST00000553498 P3H3Q8IVL6 736 aa10.96□□□□□ -0.65
ATXN3-221ENST00000553498 CCER1Q8TC90 406 aaPredicted RBP10.96□□□□□ -0.65
ATXN3-221ENST00000553498 NUP160Q12769 1436 aa10.95□□□□□ -0.66
ATXN3-221ENST00000553498 CFAP43Q8NDM7 1665 aa10.94□□□□□ -0.66
ATXN3-221ENST00000553498 CLSPNQ9HAW4 1339 aa10.93□□□□□ -0.66
ATXN3-221ENST00000553498 LHX8Q68G74 356 aa10.93□□□□□ -0.66
ATXN3-221ENST00000553498 DCBLD2Q96PD2 775 aa10.93□□□□□ -0.66
ATXN3-221ENST00000553498 ASTLQ6HA08 431 aaPredicted RBP10.92□□□□□ -0.66
ATXN3-221ENST00000553498 CARMIL2Q6F5E8 1435 aa10.92□□□□□ -0.66
ATXN3-221ENST00000553498 MTUS2Q5JR59 1369 aa10.9□□□□□ -0.66
ATXN3-221ENST00000553498 PCDHB8Q9UN66 801 aa10.9□□□□□ -0.66
ATXN3-221ENST00000553498 HECW1Q76N89 1606 aa10.89□□□□□ -0.67
ATXN3-221ENST00000553498 ATMINO43313 823 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-221ENST00000553498 PELP1Q8IZL8 1130 aaKnown RBP10.89□□□□□ -0.67
ATXN3-221ENST00000553498 BMP2KQ9NSY1 1161 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-221ENST00000553498 ATP1B4Q9UN42 357 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-221ENST00000553498 EHBP1L1Q8N3D4 1523 aa10.89□□□□□ -0.67
ATXN3-221ENST00000553498 DISP1Q96F81 1524 aa10.89□□□□□ -0.67
ATXN3-221ENST00000553498 TIE1P35590 1138 aa10.88□□□□□ -0.67
ATXN3-221ENST00000553498 KIAA0556O60303 1618 aa10.87□□□□□ -0.67
ATXN3-221ENST00000553498 PKD2Q13563 968 aa10.87□□□□□ -0.67
ATXN3-221ENST00000553498 PHLDB1Q86UU1 1377 aa10.87□□□□□ -0.67
ATXN3-221ENST00000553498 ATN1P54259 1190 aaPredicted RBP10.86□□□□□ -0.67
ATXN3-221ENST00000553498 JPH4Q96JJ6 628 aa10.86□□□□□ -0.67
ATXN3-221ENST00000553498 CDK11AQ9UQ88 783 aaPredicted RBP10.86□□□□□ -0.67
ATXN3-221ENST00000553498 CEP170Q5SW79 1584 aa10.86□□□□□ -0.67
ATXN3-221ENST00000553498 EPRSP07814 1512 aaKnown RBP10.85□□□□□ -0.67
ATXN3-221ENST00000553498 TTLL13PA6NNM8 815 aa10.84□□□□□ -0.67
ATXN3-221ENST00000553498 FGD6Q6ZV73 1430 aa10.84□□□□□ -0.67
ATXN3-221ENST00000553498 ZNF467Q7Z7K2 595 aaPredicted RBP10.83□□□□□ -0.68
ATXN3-221ENST00000553498 ARHGEF11O15085 1522 aa10.83□□□□□ -0.68
ATXN3-221ENST00000553498 MYOM3Q5VTT5 1437 aa10.83□□□□□ -0.68
ATXN3-221ENST00000553498 ACIN1Q9UKV3 1341 aaKnown RBP10.83□□□□□ -0.68
ATXN3-221ENST00000553498 NCOA2Q15596 1464 aa10.82□□□□□ -0.68
ATXN3-221ENST00000553498 RNF25Q96BH1 459 aaPredicted RBP10.82□□□□□ -0.68
ATXN3-221ENST00000553498 MIA2Q96PC5 1412 aa10.82□□□□□ -0.68
ATXN3-221ENST00000553498 NUP153P49790 1475 aaKnown RBP10.79□□□□□ -0.68
ATXN3-221ENST00000553498 SUPT6HQ7KZ85 1726 aaKnown RBP10.78□□□□□ -0.68
ATXN3-221ENST00000553498 SETD5Q9C0A6 1442 aa10.78□□□□□ -0.68
ATXN3-221ENST00000553498 FAM50AQ14320 339 aaKnown RBP10.78□□□□□ -0.68
ATXN3-221ENST00000553498 TMEM106CQ9BVX2 250 aa10.78□□□□□ -0.68
ATXN3-221ENST00000553498 RAPGEF6Q8TEU7 1601 aa10.77□□□□□ -0.68
ATXN3-221ENST00000553498 TCOF1Q13428 1488 aaKnown RBP10.77□□□□□ -0.69
ATXN3-221ENST00000553498 DHX57Q6P158 1386 aaKnown RBP10.77□□□□□ -0.69
ATXN3-221ENST00000553498 TROQ12816 1431 aaPredicted RBP10.75□□□□□ -0.69
ATXN3-221ENST00000553498 ECM2O94769 699 aaPredicted RBP10.75□□□□□ -0.69
ATXN3-221ENST00000553498 TRIM35Q9UPQ4 493 aa10.75□□□□□ -0.69
ATXN3-221ENST00000553498 PTPRGP23470 1445 aa10.75□□□□□ -0.69
ATXN3-221ENST00000553498 AKNAQ7Z591 1439 aa10.75□□□□□ -0.69
ATXN3-221ENST00000553498 PRG4Q92954 1404 aaPredicted RBP10.75□□□□□ -0.69
ATXN3-221ENST00000553498 MAGI3Q5TCQ9 1506 aa10.74□□□□□ -0.69
ATXN3-221ENST00000553498 PSEN1P49768 467 aa10.74□□□□□ -0.69
ATXN3-221ENST00000553498 RAB3GAP2Q9H2M9 1393 aa10.74□□□□□ -0.69
ATXN3-221ENST00000553498 RIOK3O14730 519 aaKnown RBP10.73□□□□□ -0.69
ATXN3-221ENST00000553498 PDAP1Q13442 181 aaKnown RBP10.73□□□□□ -0.69
ATXN3-221ENST00000553498 SLC39A7Q92504 469 aa10.73□□□□□ -0.69
ATXN3-221ENST00000553498 HFM1A2PYH4 1435 aa10.73□□□□□ -0.69
ATXN3-221ENST00000553498 CDK13Q14004 1512 aaKnown RBP10.73□□□□□ -0.69
ATXN3-221ENST00000553498 ABCA8O94911 1581 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms