RNA–Protein interactions for RNA: ENST00000553490.5

NPC2-204, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-204ENST00000553490 MLECQ14165 292 aa14.4□□□□□ -0.1
NPC2-204ENST00000553490 CSRNP3Q8WYN3 585 aa14.4□□□□□ -0.1
NPC2-204ENST00000553490 C9orf84Q5VXU9 1444 aa14.39□□□□□ -0.11
NPC2-204ENST00000553490 SCAPERQ9BY12 1400 aa14.37□□□□□ -0.11
NPC2-204ENST00000553490 MYO5CQ9NQX4 1742 aa14.37□□□□□ -0.11
NPC2-204ENST00000553490 EEA1Q15075 1411 aa14.36□□□□□ -0.11
NPC2-204ENST00000553490 PLCH2O75038 1416 aa14.35□□□□□ -0.11
NPC2-204ENST00000553490 ATP10AO60312 1499 aa14.35□□□□□ -0.11
NPC2-204ENST00000553490 DISP3Q9P2K9 1392 aa14.34□□□□□ -0.11
NPC2-204ENST00000553490 STRCQ7RTU9 1775 aa14.34□□□□□ -0.11
NPC2-204ENST00000553490 SPATA31D1Q6ZQQ2 1576 aa14.33□□□□□ -0.12
NPC2-204ENST00000553490 UHRF1BP1Q6BDS2 1440 aa14.32□□□□□ -0.12
NPC2-204ENST00000553490 ZNF518AQ6AHZ1 1483 aa14.31□□□□□ -0.12
NPC2-204ENST00000553490 KDM5CP41229 1560 aa14.31□□□□□ -0.12
NPC2-204ENST00000553490 KIF14Q15058 1648 aa14.31□□□□□ -0.12
NPC2-204ENST00000553490 DIP2CQ9Y2E4 1556 aa14.3□□□□□ -0.12
NPC2-204ENST00000553490 CEBPAP49715 358 aaPredicted RBP14.28□□□□□ -0.12
NPC2-204ENST00000553490 ARHGAP5Q13017 1502 aa14.28□□□□□ -0.12
NPC2-204ENST00000553490 ILDR2Q71H61 639 aa14.28□□□□□ -0.12
NPC2-204ENST00000553490 REREQ9P2R6 1566 aa14.28□□□□□ -0.12
NPC2-204ENST00000553490 C3P01024 1663 aa14.27□□□□□ -0.12
NPC2-204ENST00000553490 ABCA6Q8N139 1617 aa14.27□□□□□ -0.12
NPC2-204ENST00000553490 DMRT2Q9Y5R5 561 aa14.27□□□□□ -0.13
NPC2-204ENST00000553490 SOCS7O14512 581 aa14.26□□□□□ -0.13
NPC2-204ENST00000553490 EFCAB2Q5VUJ9 269 aa14.26□□□□□ -0.13
NPC2-204ENST00000553490 FMN1Q68DA7 1419 aa14.25□□□□□ -0.13
NPC2-204ENST00000553490 PTPRTO14522 1441 aa14.24□□□□□ -0.13
NPC2-204ENST00000553490 SETD1BQ9UPS6 1966 aaKnown RBP14.23□□□□□ -0.13
NPC2-204ENST00000553490 CLIP1P30622 1438 aa14.23□□□□□ -0.13
NPC2-204ENST00000553490 TROQ12816 1431 aaPredicted RBP14.23□□□□□ -0.13
NPC2-204ENST00000553490 PREX2Q70Z35 1606 aa14.22□□□□□ -0.13
NPC2-204ENST00000553490 ABCC1P33527 1531 aa14.21□□□□□ -0.13
NPC2-204ENST00000553490 MYT1LQ9UL68 1186 aa14.21□□□□□ -0.13
NPC2-204ENST00000553490 ATP1B4Q9UN42 357 aaPredicted RBP14.21□□□□□ -0.13
NPC2-204ENST00000553490 LTBP4Q8N2S1 1624 aa14.21□□□□□ -0.13
NPC2-204ENST00000553490 CDC42BPBQ9Y5S2 1711 aa14.21□□□□□ -0.14
NPC2-204ENST00000553490 AGLP35573 1532 aa14.2□□□□□ -0.14
NPC2-204ENST00000553490 ITSN2Q9NZM3 1697 aa14.2□□□□□ -0.14
NPC2-204ENST00000553490 IQSEC2Q5JU85 1478 aa14.2□□□□□ -0.14
NPC2-204ENST00000553490 ARHGAP35Q9NRY4 1499 aa14.2□□□□□ -0.14
NPC2-204ENST00000553490 MLH3Q9UHC1 1453 aa14.2□□□□□ -0.14
NPC2-204ENST00000553490 AFAP1Q8N556 730 aa14.2□□□□□ -0.14
NPC2-204ENST00000553490 CDK11AQ9UQ88 783 aaPredicted RBP14.2□□□□□ -0.14
NPC2-204ENST00000553490 LRRIQ1Q96JM4 1722 aa14.2□□□□□ -0.14
NPC2-204ENST00000553490 NCOA1Q15788 1441 aa14.19□□□□□ -0.14
NPC2-204ENST00000553490 TRAPPC8Q9Y2L5 1435 aa14.17□□□□□ -0.14
NPC2-204ENST00000553490 CNTLNQ9NXG0 1405 aa14.16□□□□□ -0.14
NPC2-204ENST00000553490 ESF1Q9H501 851 aaKnown RBP14.16□□□□□ -0.14
NPC2-204ENST00000553490 MROH2AA6NES4 1674 aa14.16□□□□□ -0.14
NPC2-204ENST00000553490 KIDINS220Q9ULH0 1771 aa14.16□□□□□ -0.14
NPC2-204ENST00000553490 CAMSAP1Q5T5Y3 1602 aa14.15□□□□□ -0.14
NPC2-204ENST00000553490 ZNF142P52746 1687 aaPredicted RBP14.12□□□□□ -0.15
NPC2-204ENST00000553490 EHMT2Q96KQ7 1210 aa14.12□□□□□ -0.15
NPC2-204ENST00000553490 NPATQ14207 1427 aa14.12□□□□□ -0.15
NPC2-204ENST00000553490 CDC42BPAQ5VT25 1732 aa14.12□□□□□ -0.15
NPC2-204ENST00000553490 MYO3AQ8NEV4 1616 aa14.12□□□□□ -0.15
NPC2-204ENST00000553490 UBTFP17480 764 aaKnown RBP14.11□□□□□ -0.15
NPC2-204ENST00000553490 CCDC18Q5T9S5 1454 aa14.11□□□□□ -0.15
NPC2-204ENST00000553490 SAMD9LQ8IVG5 1584 aa14.1□□□□□ -0.15
NPC2-204ENST00000553490 SUPT6HQ7KZ85 1726 aaKnown RBP14.09□□□□□ -0.15
NPC2-204ENST00000553490 SYCP2Q9BX26 1530 aa14.09□□□□□ -0.15
NPC2-204ENST00000553490 CLTCQ00610 1675 aaKnown RBP14.07□□□□□ -0.16
NPC2-204ENST00000553490 CEP170BQ9Y4F5 1589 aaPredicted RBP14.07□□□□□ -0.16
NPC2-204ENST00000553490 PLA2R1Q13018 1463 aa14.06□□□□□ -0.16
NPC2-204ENST00000553490 PLXNC1O60486 1568 aa14.06□□□□□ -0.16
NPC2-204ENST00000553490 ZNF335Q9H4Z2 1342 aaPredicted RBP14.06□□□□□ -0.16
NPC2-204ENST00000553490 CASKIN1Q8WXD9 1431 aa14.06□□□□□ -0.16
NPC2-204ENST00000553490 ATP7AQ04656 1500 aa14.05□□□□□ -0.16
NPC2-204ENST00000553490 INO80Q9ULG1 1556 aaPredicted RBP14.05□□□□□ -0.16
NPC2-204ENST00000553490 UBAP1LF5GYI3 381 aa14.04□□□□□ -0.16
NPC2-204ENST00000553490 ZMYM3Q14202 1370 aa14.04□□□□□ -0.16
NPC2-204ENST00000553490 TCOF1Q13428 1488 aaKnown RBP14.04□□□□□ -0.16
NPC2-204ENST00000553490 NCKAP5LQ9HCH0 1330 aa14.03□□□□□ -0.16
NPC2-204ENST00000553490 FYCO1Q9BQS8 1478 aa14.02□□□□□ -0.16
NPC2-204ENST00000553490 PTPRKQ15262 1439 aa14.01□□□□□ -0.17
NPC2-204ENST00000553490 SPAG9O60271 1321 aaKnown RBP14.01□□□□□ -0.17
NPC2-204ENST00000553490 A2MP01023 1474 aa14□□□□□ -0.17
NPC2-204ENST00000553490 ZNF777Q9ULD5 760 aaPredicted RBP14□□□□□ -0.17
NPC2-204ENST00000553490 MED1Q15648 1581 aaPredicted RBP14□□□□□ -0.17
NPC2-204ENST00000553490 PKD2Q13563 968 aa13.99□□□□□ -0.17
NPC2-204ENST00000553490 GPATCH8Q9UKJ3 1502 aaKnown RBP13.99□□□□□ -0.17
NPC2-204ENST00000553490 PLEKHH2Q8IVE3 1493 aa13.99□□□□□ -0.17
NPC2-204ENST00000553490 POLR1AO95602 1720 aaPredicted RBP13.98□□□□□ -0.17
NPC2-204ENST00000553490 ADGBQ8N7X0 1667 aa13.98□□□□□ -0.17
NPC2-204ENST00000553490 CHIC1Q5VXU3 224 aa13.98□□□□□ -0.17
NPC2-204ENST00000553490 PPP6R1Q9UPN7 881 aa13.97□□□□□ -0.17
NPC2-204ENST00000553490 A2ML1A8K2U0 1454 aa13.96□□□□□ -0.17
NPC2-204ENST00000553490 DNMT1P26358 1616 aaKnown RBP13.96□□□□□ -0.17
NPC2-204ENST00000553490 KIAA1107Q9UPP5 1409 aa13.96□□□□□ -0.18
NPC2-204ENST00000553490 HNRNPMP52272 730 aaKnown RBP eCLIP13.94□□□□□ -0.18
NPC2-204ENST00000553490 NEURL4Q96JN8 1562 aa13.94□□□□□ -0.18
NPC2-204ENST00000553490 CPS1P31327 1500 aa13.94□□□□□ -0.18
NPC2-204ENST00000553490 SCAF1Q9H7N4 1312 aaKnown RBP13.93□□□□□ -0.18
NPC2-204ENST00000553490 GGT6Q6P531 493 aa13.93□□□□□ -0.18
NPC2-204ENST00000553490 CFDP1Q9UEE9 299 aaPredicted RBP13.91□□□□□ -0.18
NPC2-204ENST00000553490 CCNB3Q8WWL7 1395 aa13.91□□□□□ -0.18
NPC2-204ENST00000553490 HSPA1LP34931 641 aa13.9□□□□□ -0.18
NPC2-204ENST00000553490 TIAM1Q13009 1591 aa13.9□□□□□ -0.18
NPC2-204ENST00000553490 KDM5DQ9BY66 1539 aa13.9□□□□□ -0.19
NPC2-204ENST00000553490 SHANK2Q9UPX8 1470 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms