RNA–Protein interactions for RNA: ENST00000553438.1

IFT43-205, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 472 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-205ENST00000553438 PLCH2O75038 1416 aa17.07■□□□□ 0.32
IFT43-205ENST00000553438 EFCAB2Q5VUJ9 269 aa17.02■□□□□ 0.32
IFT43-205ENST00000553438 FER1L4A9Z1Z3 1794 aa17.02■□□□□ 0.31
IFT43-205ENST00000553438 ATP10AO60312 1499 aa17.01■□□□□ 0.31
IFT43-205ENST00000553438 CERKQ8TCT0 537 aa17.01■□□□□ 0.31
IFT43-205ENST00000553438 ATP1B4Q9UN42 357 aaPredicted RBP17.01■□□□□ 0.31
IFT43-205ENST00000553438 C9orf84Q5VXU9 1444 aa17.01■□□□□ 0.31
IFT43-205ENST00000553438 ARHGEF12Q9NZN5 1544 aa17■□□□□ 0.31
IFT43-205ENST00000553438 FMN1Q68DA7 1419 aa16.99■□□□□ 0.31
IFT43-205ENST00000553438 CDK11AQ9UQ88 783 aaPredicted RBP16.98■□□□□ 0.31
IFT43-205ENST00000553438 UBTFP17480 764 aaKnown RBP16.97■□□□□ 0.31
IFT43-205ENST00000553438 EHMT2Q96KQ7 1210 aa16.97■□□□□ 0.31
IFT43-205ENST00000553438 MYO5CQ9NQX4 1742 aa16.96■□□□□ 0.31
IFT43-205ENST00000553438 CEBPAP49715 358 aaPredicted RBP16.96■□□□□ 0.31
IFT43-205ENST00000553438 ARHGAP35Q9NRY4 1499 aa16.95■□□□□ 0.3
IFT43-205ENST00000553438 ZNF518AQ6AHZ1 1483 aa16.94■□□□□ 0.3
IFT43-205ENST00000553438 KIF14Q15058 1648 aa16.94■□□□□ 0.3
IFT43-205ENST00000553438 TROQ12816 1431 aaPredicted RBP16.94■□□□□ 0.3
IFT43-205ENST00000553438 ARHGAP5Q13017 1502 aa16.93■□□□□ 0.3
IFT43-205ENST00000553438 AFAP1Q8N556 730 aa16.93■□□□□ 0.3
IFT43-205ENST00000553438 PREX1Q8TCU6 1659 aa16.92■□□□□ 0.3
IFT43-205ENST00000553438 KDM5CP41229 1560 aa16.91■□□□□ 0.3
IFT43-205ENST00000553438 MYT1LQ9UL68 1186 aa16.91■□□□□ 0.3
IFT43-205ENST00000553438 CLIP1P30622 1438 aa16.9■□□□□ 0.3
IFT43-205ENST00000553438 UHRF1BP1Q6BDS2 1440 aa16.89■□□□□ 0.29
IFT43-205ENST00000553438 DMRT2Q9Y5R5 561 aa16.89■□□□□ 0.29
IFT43-205ENST00000553438 DIP2CQ9Y2E4 1556 aa16.87■□□□□ 0.29
IFT43-205ENST00000553438 SETD1BQ9UPS6 1966 aaKnown RBP16.87■□□□□ 0.29
IFT43-205ENST00000553438 REREQ9P2R6 1566 aa16.86■□□□□ 0.29
IFT43-205ENST00000553438 MLH3Q9UHC1 1453 aa16.86■□□□□ 0.29
IFT43-205ENST00000553438 STRCQ7RTU9 1775 aa16.85■□□□□ 0.29
IFT43-205ENST00000553438 ABCA6Q8N139 1617 aa16.84■□□□□ 0.29
IFT43-205ENST00000553438 TRAPPC8Q9Y2L5 1435 aa16.83■□□□□ 0.28
IFT43-205ENST00000553438 LRRIQ1Q96JM4 1722 aa16.82■□□□□ 0.28
IFT43-205ENST00000553438 CDC42BPBQ9Y5S2 1711 aa16.82■□□□□ 0.28
IFT43-205ENST00000553438 AGLP35573 1532 aa16.82■□□□□ 0.28
IFT43-205ENST00000553438 ESF1Q9H501 851 aaKnown RBP16.81■□□□□ 0.28
IFT43-205ENST00000553438 ABCC1P33527 1531 aa16.8■□□□□ 0.28
IFT43-205ENST00000553438 C3P01024 1663 aa16.8■□□□□ 0.28
IFT43-205ENST00000553438 PREX2Q70Z35 1606 aa16.8■□□□□ 0.28
IFT43-205ENST00000553438 PTPRTO14522 1441 aa16.79■□□□□ 0.28
IFT43-205ENST00000553438 DISP3Q9P2K9 1392 aa16.78■□□□□ 0.28
IFT43-205ENST00000553438 CCDC18Q5T9S5 1454 aa16.78■□□□□ 0.28
IFT43-205ENST00000553438 CASKIN1Q8WXD9 1431 aa16.78■□□□□ 0.28
IFT43-205ENST00000553438 ITSN2Q9NZM3 1697 aa16.77■□□□□ 0.28
IFT43-205ENST00000553438 CNTLNQ9NXG0 1405 aa16.77■□□□□ 0.27
IFT43-205ENST00000553438 CHIC1Q5VXU3 224 aa16.76■□□□□ 0.27
IFT43-205ENST00000553438 KIDINS220Q9ULH0 1771 aa16.75■□□□□ 0.27
IFT43-205ENST00000553438 ILDR2Q71H61 639 aa16.74■□□□□ 0.27
IFT43-205ENST00000553438 NCOA1Q15788 1441 aa16.73■□□□□ 0.27
IFT43-205ENST00000553438 LTBP4Q8N2S1 1624 aa16.72■□□□□ 0.27
IFT43-205ENST00000553438 ZNF777Q9ULD5 760 aaPredicted RBP16.72■□□□□ 0.27
IFT43-205ENST00000553438 CDC42BPAQ5VT25 1732 aa16.72■□□□□ 0.27
IFT43-205ENST00000553438 SAMD9LQ8IVG5 1584 aa16.71■□□□□ 0.27
IFT43-205ENST00000553438 NPATQ14207 1427 aa16.7■□□□□ 0.26
IFT43-205ENST00000553438 SPAG9O60271 1321 aaKnown RBP16.7■□□□□ 0.26
IFT43-205ENST00000553438 FYCO1Q9BQS8 1478 aa16.69■□□□□ 0.26
IFT43-205ENST00000553438 ZMYM3Q14202 1370 aa16.68■□□□□ 0.26
IFT43-205ENST00000553438 SOCS7O14512 581 aa16.68■□□□□ 0.26
IFT43-205ENST00000553438 SYCP2Q9BX26 1530 aa16.68■□□□□ 0.26
IFT43-205ENST00000553438 GPATCH8Q9UKJ3 1502 aaKnown RBP16.68■□□□□ 0.26
IFT43-205ENST00000553438 IQSEC2Q5JU85 1478 aa16.67■□□□□ 0.26
IFT43-205ENST00000553438 CAMSAP1Q5T5Y3 1602 aa16.67■□□□□ 0.26
IFT43-205ENST00000553438 HNRNPMP52272 730 aaKnown RBP eCLIP16.67■□□□□ 0.26
IFT43-205ENST00000553438 MROH2AA6NES4 1674 aa16.66■□□□□ 0.26
IFT43-205ENST00000553438 SPATA31D1Q6ZQQ2 1576 aa16.65■□□□□ 0.26
IFT43-205ENST00000553438 KIAA1107Q9UPP5 1409 aa16.64■□□□□ 0.25
IFT43-205ENST00000553438 ATP7AQ04656 1500 aa16.64■□□□□ 0.25
IFT43-205ENST00000553438 NCKAP5LQ9HCH0 1330 aa16.64■□□□□ 0.25
IFT43-205ENST00000553438 PLEKHH2Q8IVE3 1493 aa16.63■□□□□ 0.25
IFT43-205ENST00000553438 SUPT6HQ7KZ85 1726 aaKnown RBP16.63■□□□□ 0.25
IFT43-205ENST00000553438 A2MP01023 1474 aa16.62■□□□□ 0.25
IFT43-205ENST00000553438 CFDP1Q9UEE9 299 aaPredicted RBP16.62■□□□□ 0.25
IFT43-205ENST00000553438 PLXNC1O60486 1568 aa16.61■□□□□ 0.25
IFT43-205ENST00000553438 ZNF335Q9H4Z2 1342 aaPredicted RBP16.61■□□□□ 0.25
IFT43-205ENST00000553438 INO80Q9ULG1 1556 aaPredicted RBP16.6■□□□□ 0.25
IFT43-205ENST00000553438 CLTCQ00610 1675 aaKnown RBP16.6■□□□□ 0.25
IFT43-205ENST00000553438 GGT6Q6P531 493 aa16.6■□□□□ 0.25
IFT43-205ENST00000553438 CCNB3Q8WWL7 1395 aa16.6■□□□□ 0.25
IFT43-205ENST00000553438 PTPRKQ15262 1439 aa16.6■□□□□ 0.25
IFT43-205ENST00000553438 PLA2R1Q13018 1463 aa16.6■□□□□ 0.25
IFT43-205ENST00000553438 PKD2Q13563 968 aa16.59■□□□□ 0.25
IFT43-205ENST00000553438 MYO3AQ8NEV4 1616 aa16.59■□□□□ 0.25
IFT43-205ENST00000553438 ZNF142P52746 1687 aaPredicted RBP16.57■□□□□ 0.24
IFT43-205ENST00000553438 CEP170BQ9Y4F5 1589 aaPredicted RBP16.57■□□□□ 0.24
IFT43-205ENST00000553438 TCOF1Q13428 1488 aaKnown RBP16.57■□□□□ 0.24
IFT43-205ENST00000553438 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
IFT43-205ENST00000553438 UBAP1LF5GYI3 381 aa16.57■□□□□ 0.24
IFT43-205ENST00000553438 PPP6R1Q9UPN7 881 aa16.56■□□□□ 0.24
IFT43-205ENST00000553438 ZNF644Q9H582 1327 aaPredicted RBP16.53■□□□□ 0.24
IFT43-205ENST00000553438 ADGBQ8N7X0 1667 aa16.52■□□□□ 0.23
IFT43-205ENST00000553438 A2ML1A8K2U0 1454 aa16.51■□□□□ 0.23
IFT43-205ENST00000553438 MBD5Q9P267 1494 aa16.51■□□□□ 0.23
IFT43-205ENST00000553438 TIAM1Q13009 1591 aa16.5■□□□□ 0.23
IFT43-205ENST00000553438 RTEL1-TNFRSF6BF6WH68 1400 aa16.49■□□□□ 0.23
IFT43-205ENST00000553438 DHX29Q7Z478 1369 aaKnown RBP16.49■□□□□ 0.23
IFT43-205ENST00000553438 EHBP1L1Q8N3D4 1523 aa16.48■□□□□ 0.23
IFT43-205ENST00000553438 DNMT1P26358 1616 aaKnown RBP16.48■□□□□ 0.23
IFT43-205ENST00000553438 CEP162Q5TB80 1403 aa16.46■□□□□ 0.23
IFT43-205ENST00000553438 KIF3BO15066 747 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms