RNA–Protein interactions for RNA: ENST00000553384.5

RDH11-203, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best) BASIC

Gene RDH11, Length 1,926 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-203ENST00000553384 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.48□□□□□ -0.57
RDH11-203ENST00000553384 YEATS2Q9ULM3 1422 aa11.48□□□□□ -0.57
RDH11-203ENST00000553384 FOXD1Q16676 465 aa11.48□□□□□ -0.57
RDH11-203ENST00000553384 TTC37Q6PGP7 1564 aa11.47□□□□□ -0.57
RDH11-203ENST00000553384 PLPPR3Q6T4P5 718 aa11.46□□□□□ -0.58
RDH11-203ENST00000553384 PLCH2O75038 1416 aa11.46□□□□□ -0.58
RDH11-203ENST00000553384 ATP10AO60312 1499 aa11.45□□□□□ -0.58
RDH11-203ENST00000553384 SCAPERQ9BY12 1400 aa11.45□□□□□ -0.58
RDH11-203ENST00000553384 SOCS7O14512 581 aa11.45□□□□□ -0.58
RDH11-203ENST00000553384 MLECQ14165 292 aa11.45□□□□□ -0.58
RDH11-203ENST00000553384 HECW1Q76N89 1606 aa11.44□□□□□ -0.58
RDH11-203ENST00000553384 ARHGEF12Q9NZN5 1544 aa11.44□□□□□ -0.58
RDH11-203ENST00000553384 PCGF6Q9BYE7 350 aa11.43□□□□□ -0.58
RDH11-203ENST00000553384 C9orf84Q5VXU9 1444 aa11.43□□□□□ -0.58
RDH11-203ENST00000553384 FER1L4A9Z1Z3 1794 aa11.43□□□□□ -0.58
RDH11-203ENST00000553384 SIGLEC1Q9BZZ2 1709 aa11.43□□□□□ -0.58
RDH11-203ENST00000553384 EFCAB2Q5VUJ9 269 aa11.43□□□□□ -0.58
RDH11-203ENST00000553384 DISP3Q9P2K9 1392 aa11.42□□□□□ -0.58
RDH11-203ENST00000553384 SETD1BQ9UPS6 1966 aaKnown RBP11.41□□□□□ -0.58
RDH11-203ENST00000553384 PREX1Q8TCU6 1659 aa11.41□□□□□ -0.58
RDH11-203ENST00000553384 ILDR2Q71H61 639 aa11.4□□□□□ -0.58
RDH11-203ENST00000553384 CDK11AQ9UQ88 783 aaPredicted RBP11.4□□□□□ -0.58
RDH11-203ENST00000553384 UHRF1BP1Q6BDS2 1440 aa11.4□□□□□ -0.59
RDH11-203ENST00000553384 PTPRTO14522 1441 aa11.39□□□□□ -0.59
RDH11-203ENST00000553384 CEBPAP49715 358 aaPredicted RBP11.39□□□□□ -0.59
RDH11-203ENST00000553384 ZNF518AQ6AHZ1 1483 aa11.38□□□□□ -0.59
RDH11-203ENST00000553384 ATP1B4Q9UN42 357 aaPredicted RBP11.38□□□□□ -0.59
RDH11-203ENST00000553384 ARHGAP35Q9NRY4 1499 aa11.37□□□□□ -0.59
RDH11-203ENST00000553384 FMN1Q68DA7 1419 aa11.37□□□□□ -0.59
RDH11-203ENST00000553384 STRCQ7RTU9 1775 aa11.36□□□□□ -0.59
RDH11-203ENST00000553384 HRCP23327 699 aa11.36□□□□□ -0.59
RDH11-203ENST00000553384 CDK13Q14004 1512 aaKnown RBP11.36□□□□□ -0.59
RDH11-203ENST00000553384 IQSEC2Q5JU85 1478 aa11.35□□□□□ -0.59
RDH11-203ENST00000553384 KDM5CP41229 1560 aa11.35□□□□□ -0.59
RDH11-203ENST00000553384 REREQ9P2R6 1566 aa11.35□□□□□ -0.59
RDH11-203ENST00000553384 CLIP1P30622 1438 aa11.34□□□□□ -0.59
RDH11-203ENST00000553384 AFAP1Q8N556 730 aa11.34□□□□□ -0.59
RDH11-203ENST00000553384 TRAPPC8Q9Y2L5 1435 aa11.33□□□□□ -0.6
RDH11-203ENST00000553384 MLH3Q9UHC1 1453 aa11.33□□□□□ -0.6
RDH11-203ENST00000553384 MYO5CQ9NQX4 1742 aa11.33□□□□□ -0.6
RDH11-203ENST00000553384 ESF1Q9H501 851 aaKnown RBP11.33□□□□□ -0.6
RDH11-203ENST00000553384 MSH5O43196 834 aa11.32□□□□□ -0.6
RDH11-203ENST00000553384 TROQ12816 1431 aaPredicted RBP11.32□□□□□ -0.6
RDH11-203ENST00000553384 AGLP35573 1532 aa11.32□□□□□ -0.6
RDH11-203ENST00000553384 TRIM26Q12899 539 aaPredicted RBP11.31□□□□□ -0.6
RDH11-203ENST00000553384 MYT1LQ9UL68 1186 aa11.31□□□□□ -0.6
RDH11-203ENST00000553384 CNTLNQ9NXG0 1405 aa11.31□□□□□ -0.6
RDH11-203ENST00000553384 SPATA31D1Q6ZQQ2 1576 aa11.3□□□□□ -0.6
RDH11-203ENST00000553384 ARHGAP5Q13017 1502 aa11.3□□□□□ -0.6
RDH11-203ENST00000553384 LTBP4Q8N2S1 1624 aa11.3□□□□□ -0.6
RDH11-203ENST00000553384 DIP2CQ9Y2E4 1556 aa11.3□□□□□ -0.6
RDH11-203ENST00000553384 KIF14Q15058 1648 aa11.29□□□□□ -0.6
RDH11-203ENST00000553384 NCOA1Q15788 1441 aa11.29□□□□□ -0.6
RDH11-203ENST00000553384 CEP162Q5TB80 1403 aa11.29□□□□□ -0.6
RDH11-203ENST00000553384 C3P01024 1663 aa11.27□□□□□ -0.6
RDH11-203ENST00000553384 NPATQ14207 1427 aa11.27□□□□□ -0.61
RDH11-203ENST00000553384 ABCA6Q8N139 1617 aa11.25□□□□□ -0.61
RDH11-203ENST00000553384 CASKIN1Q8WXD9 1431 aa11.24□□□□□ -0.61
RDH11-203ENST00000553384 PKD2Q13563 968 aa11.23□□□□□ -0.61
RDH11-203ENST00000553384 ABCC1P33527 1531 aa11.23□□□□□ -0.61
RDH11-203ENST00000553384 ZMYM3Q14202 1370 aa11.23□□□□□ -0.61
RDH11-203ENST00000553384 FYCO1Q9BQS8 1478 aa11.22□□□□□ -0.61
RDH11-203ENST00000553384 CDC42BPBQ9Y5S2 1711 aa11.22□□□□□ -0.61
RDH11-203ENST00000553384 CCDC18Q5T9S5 1454 aa11.22□□□□□ -0.61
RDH11-203ENST00000553384 CAMSAP1Q5T5Y3 1602 aa11.21□□□□□ -0.61
RDH11-203ENST00000553384 PLA2R1Q13018 1463 aa11.21□□□□□ -0.61
RDH11-203ENST00000553384 MROH2AA6NES4 1674 aa11.21□□□□□ -0.62
RDH11-203ENST00000553384 UBAP1LF5GYI3 381 aa11.21□□□□□ -0.62
RDH11-203ENST00000553384 PREX2Q70Z35 1606 aa11.2□□□□□ -0.62
RDH11-203ENST00000553384 PPP6R1Q9UPN7 881 aa11.2□□□□□ -0.62
RDH11-203ENST00000553384 KIDINS220Q9ULH0 1771 aa11.2□□□□□ -0.62
RDH11-203ENST00000553384 ZNF335Q9H4Z2 1342 aaPredicted RBP11.19□□□□□ -0.62
RDH11-203ENST00000553384 ITSN2Q9NZM3 1697 aa11.19□□□□□ -0.62
RDH11-203ENST00000553384 NCKAP5LQ9HCH0 1330 aa11.19□□□□□ -0.62
RDH11-203ENST00000553384 SPAG9O60271 1321 aaKnown RBP11.18□□□□□ -0.62
RDH11-203ENST00000553384 LRRIQ1Q96JM4 1722 aa11.18□□□□□ -0.62
RDH11-203ENST00000553384 TCOF1Q13428 1488 aaKnown RBP11.18□□□□□ -0.62
RDH11-203ENST00000553384 SAMD9LQ8IVG5 1584 aa11.17□□□□□ -0.62
RDH11-203ENST00000553384 KIAA1107Q9UPP5 1409 aa11.16□□□□□ -0.62
RDH11-203ENST00000553384 PTPRKQ15262 1439 aa11.15□□□□□ -0.62
RDH11-203ENST00000553384 VPS8Q8N3P4 1428 aa11.15□□□□□ -0.62
RDH11-203ENST00000553384 ZNF142P52746 1687 aaPredicted RBP11.14□□□□□ -0.63
RDH11-203ENST00000553384 PLEKHH2Q8IVE3 1493 aa11.14□□□□□ -0.63
RDH11-203ENST00000553384 MTUS2Q5JR59 1369 aa11.14□□□□□ -0.63
RDH11-203ENST00000553384 TOM1O60784 492 aa11.13□□□□□ -0.63
RDH11-203ENST00000553384 ZNF777Q9ULD5 760 aaPredicted RBP11.13□□□□□ -0.63
RDH11-203ENST00000553384 CDC42BPAQ5VT25 1732 aa11.13□□□□□ -0.63
RDH11-203ENST00000553384 CEP170BQ9Y4F5 1589 aaPredicted RBP11.13□□□□□ -0.63
RDH11-203ENST00000553384 GPATCH8Q9UKJ3 1502 aaKnown RBP11.13□□□□□ -0.63
RDH11-203ENST00000553384 A2MP01023 1474 aa11.13□□□□□ -0.63
RDH11-203ENST00000553384 HNRNPMP52272 730 aaKnown RBP eCLIP11.13□□□□□ -0.63
RDH11-203ENST00000553384 PLXNC1O60486 1568 aa11.13□□□□□ -0.63
RDH11-203ENST00000553384 MYO3AQ8NEV4 1616 aa11.12□□□□□ -0.63
RDH11-203ENST00000553384 APLP2Q06481 763 aa11.12□□□□□ -0.63
RDH11-203ENST00000553384 ATP7AQ04656 1500 aa11.12□□□□□ -0.63
RDH11-203ENST00000553384 GGT6Q6P531 493 aa11.11□□□□□ -0.63
RDH11-203ENST00000553384 CFDP1Q9UEE9 299 aaPredicted RBP11.11□□□□□ -0.63
RDH11-203ENST00000553384 SYCP2Q9BX26 1530 aa11.11□□□□□ -0.63
RDH11-203ENST00000553384 A2ML1A8K2U0 1454 aa11.11□□□□□ -0.63
RDH11-203ENST00000553384 CPS1P31327 1500 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms