RNA–Protein interactions for RNA: ENST00000553058.5

PPFIA2-228, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-228ENST00000553058 CREBZFQ9NS37 354 aa13.77□□□□□ -0.21
PPFIA2-228ENST00000553058 URB2Q14146 1524 aaKnown RBP13.75□□□□□ -0.21
PPFIA2-228ENST00000553058 MFRPQ9BY79 579 aa13.75□□□□□ -0.21
PPFIA2-228ENST00000553058 ZBTB7CA1YPR0 619 aa13.71□□□□□ -0.21
PPFIA2-228ENST00000553058 MKRN3Q13064 507 aaKnown RBP13.71□□□□□ -0.21
PPFIA2-228ENST00000553058 CCDC9Q9Y3X0 531 aaKnown RBP13.71□□□□□ -0.21
PPFIA2-228ENST00000553058 CCDC88BA6NC98 1476 aa13.71□□□□□ -0.21
PPFIA2-228ENST00000553058 ARID3CA6NKF2 412 aa13.7□□□□□ -0.22
PPFIA2-228ENST00000553058 APBB1O00213 710 aa13.69□□□□□ -0.22
PPFIA2-228ENST00000553058 PDIA4P13667 645 aaKnown RBP13.69□□□□□ -0.22
PPFIA2-228ENST00000553058 KRI1Q8N9T8 703 aaKnown RBP13.69□□□□□ -0.22
PPFIA2-228ENST00000553058 PPP1R37O75864 691 aa13.68□□□□□ -0.22
PPFIA2-228ENST00000553058 PDAP1Q13442 181 aaKnown RBP13.67□□□□□ -0.22
PPFIA2-228ENST00000553058 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
PPFIA2-228ENST00000553058 TRIM66O15016 1216 aa13.64□□□□□ -0.23
PPFIA2-228ENST00000553058 PDE4DQ08499 809 aa13.64□□□□□ -0.23
PPFIA2-228ENST00000553058 GPIHBP1Q8IV16 184 aa13.62□□□□□ -0.23
PPFIA2-228ENST00000553058 SPDYE1Q8NFV5 336 aaPredicted RBP13.62□□□□□ -0.23
PPFIA2-228ENST00000553058 RBM26Q5T8P6 1007 aaKnown RBP13.61□□□□□ -0.23
PPFIA2-228ENST00000553058 ARIH1Q9Y4X5 557 aaPredicted RBP13.61□□□□□ -0.23
PPFIA2-228ENST00000553058 PRR29P0C7W0 189 aa13.59□□□□□ -0.23
PPFIA2-228ENST00000553058 NECTIN2Q92692 538 aa13.59□□□□□ -0.23
PPFIA2-228ENST00000553058 ZNF608Q9ULD9 1512 aaPredicted RBP13.59□□□□□ -0.23
PPFIA2-228ENST00000553058 NCKAP5LQ9HCH0 1330 aa13.58□□□□□ -0.24
PPFIA2-228ENST00000553058 LARP6Q9BRS8 491 aaKnown RBP13.57□□□□□ -0.24
PPFIA2-228ENST00000553058 TOPBP1Q92547 1522 aa13.57□□□□□ -0.24
PPFIA2-228ENST00000553058 IFT140Q96RY7 1462 aa13.56□□□□□ -0.24
PPFIA2-228ENST00000553058 FLIIQ13045 1269 aa13.56□□□□□ -0.24
PPFIA2-228ENST00000553058 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
PPFIA2-228ENST00000553058 FAM117AQ9C073 453 aa13.55□□□□□ -0.24
PPFIA2-228ENST00000553058 ZNF316A6NFI3 1004 aaPredicted RBP13.54□□□□□ -0.24
PPFIA2-228ENST00000553058 FBXO22Q8NEZ5 403 aa13.54□□□□□ -0.24
PPFIA2-228ENST00000553058 MFSD10Q14728 455 aa13.53□□□□□ -0.24
PPFIA2-228ENST00000553058 PCDHB8Q9UN66 801 aa13.53□□□□□ -0.24
PPFIA2-228ENST00000553058 PCDHB13Q9Y5F0 798 aa13.53□□□□□ -0.24
PPFIA2-228ENST00000553058 PSEN1P49768 467 aa13.52□□□□□ -0.25
PPFIA2-228ENST00000553058 NLRP6P59044 892 aa13.52□□□□□ -0.25
PPFIA2-228ENST00000553058 CLEC11AQ9Y240 323 aa13.52□□□□□ -0.25
PPFIA2-228ENST00000553058 PDE4AP27815 886 aa13.51□□□□□ -0.25
PPFIA2-228ENST00000553058 MLLT3P42568 568 aaPredicted RBP13.51□□□□□ -0.25
PPFIA2-228ENST00000553058 DNMBPQ6XZF7 1577 aa13.49□□□□□ -0.25
PPFIA2-228ENST00000553058 CCDC82Q8N4S0 544 aa13.49□□□□□ -0.25
PPFIA2-228ENST00000553058 ABCC8Q09428 1581 aa13.49□□□□□ -0.25
PPFIA2-228ENST00000553058 PLEKHG3A1L390 1219 aa13.47□□□□□ -0.25
PPFIA2-228ENST00000553058 TARBP1Q13395 1621 aaKnown RBP13.46□□□□□ -0.25
PPFIA2-228ENST00000553058 CAMK2BQ13554 666 aa13.46□□□□□ -0.25
PPFIA2-228ENST00000553058 AQRO60306 1485 aaKnown RBP eCLIP13.45□□□□□ -0.26
PPFIA2-228ENST00000553058 POLA1P09884 1462 aaPredicted RBP13.45□□□□□ -0.26
PPFIA2-228ENST00000553058 DDX27Q96GQ7 796 aaKnown RBP13.45□□□□□ -0.26
PPFIA2-228ENST00000553058 PHF8Q9UPP1 1060 aa13.45□□□□□ -0.26
PPFIA2-228ENST00000553058 EFCAB3Q8N7B9 438 aa13.44□□□□□ -0.26
PPFIA2-228ENST00000553058 DDRGK1Q96HY6 314 aa13.44□□□□□ -0.26
PPFIA2-228ENST00000553058 EIF4G3O43432 1585 aaKnown RBP13.44□□□□□ -0.26
PPFIA2-228ENST00000553058 A6NJR5 290 aa13.43□□□□□ -0.26
PPFIA2-228ENST00000553058 SOX12O15370 315 aa13.43□□□□□ -0.26
PPFIA2-228ENST00000553058 TRAK2O60296 914 aa13.43□□□□□ -0.26
PPFIA2-228ENST00000553058 CRISPLD2Q9H0B8 497 aa13.43□□□□□ -0.26
PPFIA2-228ENST00000553058 ONECUT3O60422 494 aaPredicted RBP13.42□□□□□ -0.26
PPFIA2-228ENST00000553058 TSPYL2Q9H2G4 693 aaPredicted RBP13.41□□□□□ -0.26
PPFIA2-228ENST00000553058 RAD54L2Q9Y4B4 1467 aa13.4□□□□□ -0.26
PPFIA2-228ENST00000553058 RIMBP3CA6NJZ7 1639 aa13.39□□□□□ -0.27
PPFIA2-228ENST00000553058 RIMBP3BA6NNM3 1639 aa13.39□□□□□ -0.27
PPFIA2-228ENST00000553058 RIMBP3Q9UFD9 1639 aa13.39□□□□□ -0.27
PPFIA2-228ENST00000553058 ZNF579Q8NAF0 562 aaKnown RBP13.39□□□□□ -0.27
PPFIA2-228ENST00000553058 CLUAP1Q96AJ1 413 aa13.39□□□□□ -0.27
PPFIA2-228ENST00000553058 ARHGEF11O15085 1522 aa13.39□□□□□ -0.27
PPFIA2-228ENST00000553058 KCTD17Q8N5Z5 321 aa13.37□□□□□ -0.27
PPFIA2-228ENST00000553058 TDRD9Q8NDG6 1382 aaKnown RBP13.36□□□□□ -0.27
PPFIA2-228ENST00000553058 SOGA1O94964 1423 aa13.36□□□□□ -0.27
PPFIA2-228ENST00000553058 CUX1P39880 1505 aa13.35□□□□□ -0.27
PPFIA2-228ENST00000553058 TRAIPQ9BWF2 469 aa13.35□□□□□ -0.27
PPFIA2-228ENST00000553058 CABP2Q9NPB3 220 aa13.34□□□□□ -0.27
PPFIA2-228ENST00000553058 FGD5Q6ZNL6 1462 aa13.34□□□□□ -0.27
PPFIA2-228ENST00000553058 GPR37O15354 613 aa13.33□□□□□ -0.28
PPFIA2-228ENST00000553058 AKT1S1Q96B36 256 aa13.32□□□□□ -0.28
PPFIA2-228ENST00000553058 GOPCQ9HD26 462 aa13.32□□□□□ -0.28
PPFIA2-228ENST00000553058 MINK1Q8N4C8 1332 aaPredicted RBP13.31□□□□□ -0.28
PPFIA2-228ENST00000553058 PARP9Q8IXQ6 854 aa13.29□□□□□ -0.28
PPFIA2-228ENST00000553058 CHD1O14646 1710 aa13.29□□□□□ -0.28
PPFIA2-228ENST00000553058 AMHR2Q16671 573 aa13.28□□□□□ -0.28
PPFIA2-228ENST00000553058 SNAPC4Q5SXM2 1469 aa13.28□□□□□ -0.28
PPFIA2-228ENST00000553058 ARAP1Q96P48 1450 aa13.28□□□□□ -0.28
PPFIA2-228ENST00000553058 CYB5RLQ6IPT4 315 aa13.27□□□□□ -0.29
PPFIA2-228ENST00000553058 CCDC102AQ96A19 550 aa13.27□□□□□ -0.29
PPFIA2-228ENST00000553058 WDR97A6NE52 1622 aa13.27□□□□□ -0.29
PPFIA2-228ENST00000553058 RAD21O60216 631 aa13.26□□□□□ -0.29
PPFIA2-228ENST00000553058 MS4A4AQ96JQ5 239 aa13.25□□□□□ -0.29
PPFIA2-228ENST00000553058 CLASP1Q7Z460 1538 aa13.24□□□□□ -0.29
PPFIA2-228ENST00000553058 GRIN2BQ13224 1484 aa13.24□□□□□ -0.29
PPFIA2-228ENST00000553058 MAP2K5Q13163 448 aa13.24□□□□□ -0.29
PPFIA2-228ENST00000553058 MAGI1Q96QZ7 1491 aaPredicted RBP13.23□□□□□ -0.29
PPFIA2-228ENST00000553058 IRF6O14896 467 aa13.23□□□□□ -0.29
PPFIA2-228ENST00000553058 ZNF777Q9ULD5 760 aaPredicted RBP13.23□□□□□ -0.29
PPFIA2-228ENST00000553058 CCDC61Q9Y6R9 512 aa13.23□□□□□ -0.29
PPFIA2-228ENST00000553058 SPDYE16A6NNV3 312 aaPredicted RBP13.22□□□□□ -0.29
PPFIA2-228ENST00000553058 AEBP1Q8IUX7 1158 aa13.22□□□□□ -0.29
PPFIA2-228ENST00000553058 REM2Q8IYK8 340 aaPredicted RBP13.22□□□□□ -0.29
PPFIA2-228ENST00000553058 MCM6Q14566 821 aa13.21□□□□□ -0.29
PPFIA2-228ENST00000553058 IFNL1Q8IU54 200 aa13.21□□□□□ -0.29
PPFIA2-228ENST00000553058 PCMTD1Q96MG8 357 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms