RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 ZFYVE16Q7Z3T8 1539 aa14.46□□□□□ -0.09
CDK4-213ENST00000552713 HECW1Q76N89 1606 aa14.46□□□□□ -0.09
CDK4-213ENST00000552713 PLEKHD1A6NEE1 506 aa14.45□□□□□ -0.1
CDK4-213ENST00000552713 MLECQ14165 292 aa14.44□□□□□ -0.1
CDK4-213ENST00000552713 CERKQ8TCT0 537 aa14.44□□□□□ -0.1
CDK4-213ENST00000552713 EFCAB5A4FU69 1503 aa14.44□□□□□ -0.1
CDK4-213ENST00000552713 POGZQ7Z3K3 1410 aa14.42□□□□□ -0.1
CDK4-213ENST00000552713 CDK13Q14004 1512 aaKnown RBP14.42□□□□□ -0.1
CDK4-213ENST00000552713 STRCQ7RTU9 1775 aa14.42□□□□□ -0.1
CDK4-213ENST00000552713 PREX1Q8TCU6 1659 aa14.4□□□□□ -0.1
CDK4-213ENST00000552713 MAGI2Q86UL8 1455 aa14.39□□□□□ -0.11
CDK4-213ENST00000552713 ARHGEF12Q9NZN5 1544 aa14.39□□□□□ -0.11
CDK4-213ENST00000552713 SCAPERQ9BY12 1400 aa14.39□□□□□ -0.11
CDK4-213ENST00000552713 MYO5CQ9NQX4 1742 aa14.38□□□□□ -0.11
CDK4-213ENST00000552713 SETD1BQ9UPS6 1966 aaKnown RBP14.37□□□□□ -0.11
CDK4-213ENST00000552713 CEBPAP49715 358 aaPredicted RBP14.37□□□□□ -0.11
CDK4-213ENST00000552713 PLCH2O75038 1416 aa14.36□□□□□ -0.11
CDK4-213ENST00000552713 ILDR2Q71H61 639 aa14.36□□□□□ -0.11
CDK4-213ENST00000552713 ATP10AO60312 1499 aa14.36□□□□□ -0.11
CDK4-213ENST00000552713 KIF14Q15058 1648 aa14.33□□□□□ -0.11
CDK4-213ENST00000552713 C9orf84Q5VXU9 1444 aa14.33□□□□□ -0.11
CDK4-213ENST00000552713 LRRIQ1Q96JM4 1722 aa14.32□□□□□ -0.12
CDK4-213ENST00000552713 C3P01024 1663 aa14.3□□□□□ -0.12
CDK4-213ENST00000552713 DISP3Q9P2K9 1392 aa14.3□□□□□ -0.12
CDK4-213ENST00000552713 EEA1Q15075 1411 aa14.3□□□□□ -0.12
CDK4-213ENST00000552713 KDM5CP41229 1560 aa14.29□□□□□ -0.12
CDK4-213ENST00000552713 CDC42BPBQ9Y5S2 1711 aa14.29□□□□□ -0.12
CDK4-213ENST00000552713 AFAP1Q8N556 730 aa14.28□□□□□ -0.12
CDK4-213ENST00000552713 DIP2CQ9Y2E4 1556 aa14.28□□□□□ -0.12
CDK4-213ENST00000552713 ABCA6Q8N139 1617 aa14.27□□□□□ -0.12
CDK4-213ENST00000552713 EFCAB2Q5VUJ9 269 aa14.27□□□□□ -0.13
CDK4-213ENST00000552713 ATP1B4Q9UN42 357 aaPredicted RBP14.26□□□□□ -0.13
CDK4-213ENST00000552713 ZNF518AQ6AHZ1 1483 aa14.25□□□□□ -0.13
CDK4-213ENST00000552713 UHRF1BP1Q6BDS2 1440 aa14.25□□□□□ -0.13
CDK4-213ENST00000552713 EHMT2Q96KQ7 1210 aa14.25□□□□□ -0.13
CDK4-213ENST00000552713 ARHGAP5Q13017 1502 aa14.25□□□□□ -0.13
CDK4-213ENST00000552713 SOCS7O14512 581 aa14.24□□□□□ -0.13
CDK4-213ENST00000552713 LTBP4Q8N2S1 1624 aa14.23□□□□□ -0.13
CDK4-213ENST00000552713 SPATA31D1Q6ZQQ2 1576 aa14.23□□□□□ -0.13
CDK4-213ENST00000552713 DMRT2Q9Y5R5 561 aa14.23□□□□□ -0.13
CDK4-213ENST00000552713 ARHGAP35Q9NRY4 1499 aa14.23□□□□□ -0.13
CDK4-213ENST00000552713 REREQ9P2R6 1566 aa14.22□□□□□ -0.13
CDK4-213ENST00000552713 TROQ12816 1431 aaPredicted RBP14.22□□□□□ -0.13
CDK4-213ENST00000552713 ITSN2Q9NZM3 1697 aa14.21□□□□□ -0.13
CDK4-213ENST00000552713 PTPRTO14522 1441 aa14.21□□□□□ -0.13
CDK4-213ENST00000552713 KIDINS220Q9ULH0 1771 aa14.21□□□□□ -0.13
CDK4-213ENST00000552713 MYT1LQ9UL68 1186 aa14.2□□□□□ -0.14
CDK4-213ENST00000552713 FMN1Q68DA7 1419 aa14.2□□□□□ -0.14
CDK4-213ENST00000552713 TRAPPC8Q9Y2L5 1435 aa14.2□□□□□ -0.14
CDK4-213ENST00000552713 PREX2Q70Z35 1606 aa14.19□□□□□ -0.14
CDK4-213ENST00000552713 MLH3Q9UHC1 1453 aa14.18□□□□□ -0.14
CDK4-213ENST00000552713 ABCC1P33527 1531 aa14.18□□□□□ -0.14
CDK4-213ENST00000552713 AGLP35573 1532 aa14.18□□□□□ -0.14
CDK4-213ENST00000552713 CDC42BPAQ5VT25 1732 aa14.18□□□□□ -0.14
CDK4-213ENST00000552713 UBTFP17480 764 aaKnown RBP14.17□□□□□ -0.14
CDK4-213ENST00000552713 CDK11AQ9UQ88 783 aaPredicted RBP14.17□□□□□ -0.14
CDK4-213ENST00000552713 NCOA1Q15788 1441 aa14.16□□□□□ -0.14
CDK4-213ENST00000552713 CLIP1P30622 1438 aa14.15□□□□□ -0.14
CDK4-213ENST00000552713 CAMSAP1Q5T5Y3 1602 aa14.14□□□□□ -0.15
CDK4-213ENST00000552713 SUPT6HQ7KZ85 1726 aaKnown RBP14.13□□□□□ -0.15
CDK4-213ENST00000552713 MROH2AA6NES4 1674 aa14.13□□□□□ -0.15
CDK4-213ENST00000552713 IQSEC2Q5JU85 1478 aa14.12□□□□□ -0.15
CDK4-213ENST00000552713 SAMD9LQ8IVG5 1584 aa14.11□□□□□ -0.15
CDK4-213ENST00000552713 ESF1Q9H501 851 aaKnown RBP14.11□□□□□ -0.15
CDK4-213ENST00000552713 CLTCQ00610 1675 aaKnown RBP14.1□□□□□ -0.15
CDK4-213ENST00000552713 NCKAP5LQ9HCH0 1330 aa14.1□□□□□ -0.15
CDK4-213ENST00000552713 CNTLNQ9NXG0 1405 aa14.09□□□□□ -0.15
CDK4-213ENST00000552713 MAPK8IP2Q13387 824 aaPredicted RBP14.09□□□□□ -0.15
CDK4-213ENST00000552713 ZNF335Q9H4Z2 1342 aaPredicted RBP14.09□□□□□ -0.15
CDK4-213ENST00000552713 MYO3AQ8NEV4 1616 aa14.08□□□□□ -0.16
CDK4-213ENST00000552713 ZNF142P52746 1687 aaPredicted RBP14.07□□□□□ -0.16
CDK4-213ENST00000552713 ZMYM3Q14202 1370 aa14.07□□□□□ -0.16
CDK4-213ENST00000552713 NPATQ14207 1427 aa14.07□□□□□ -0.16
CDK4-213ENST00000552713 SYCP2Q9BX26 1530 aa14.06□□□□□ -0.16
CDK4-213ENST00000552713 CASKIN1Q8WXD9 1431 aa14.06□□□□□ -0.16
CDK4-213ENST00000552713 ZNF777Q9ULD5 760 aaPredicted RBP14.04□□□□□ -0.16
CDK4-213ENST00000552713 CCDC18Q5T9S5 1454 aa14.04□□□□□ -0.16
CDK4-213ENST00000552713 UBAP1LF5GYI3 381 aa14.03□□□□□ -0.16
CDK4-213ENST00000552713 HNRNPMP52272 730 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDK4-213ENST00000552713 ATP7AQ04656 1500 aa14.03□□□□□ -0.16
CDK4-213ENST00000552713 PLXNC1O60486 1568 aa14.03□□□□□ -0.16
CDK4-213ENST00000552713 INO80Q9ULG1 1556 aaPredicted RBP14.03□□□□□ -0.16
CDK4-213ENST00000552713 CEP170BQ9Y4F5 1589 aaPredicted RBP14.03□□□□□ -0.16
CDK4-213ENST00000552713 GPATCH8Q9UKJ3 1502 aaKnown RBP14.02□□□□□ -0.16
CDK4-213ENST00000552713 PTPRKQ15262 1439 aa14.02□□□□□ -0.16
CDK4-213ENST00000552713 TCOF1Q13428 1488 aaKnown RBP14.01□□□□□ -0.17
CDK4-213ENST00000552713 SPAG9O60271 1321 aaKnown RBP14.01□□□□□ -0.17
CDK4-213ENST00000552713 PLA2R1Q13018 1463 aa14□□□□□ -0.17
CDK4-213ENST00000552713 A2MP01023 1474 aa13.99□□□□□ -0.17
CDK4-213ENST00000552713 PKD2Q13563 968 aa13.98□□□□□ -0.17
CDK4-213ENST00000552713 POLR1AO95602 1720 aaPredicted RBP13.98□□□□□ -0.17
CDK4-213ENST00000552713 ADGBQ8N7X0 1667 aa13.98□□□□□ -0.17
CDK4-213ENST00000552713 DNMT1P26358 1616 aaKnown RBP13.97□□□□□ -0.17
CDK4-213ENST00000552713 GGT6Q6P531 493 aa13.97□□□□□ -0.17
CDK4-213ENST00000552713 FYCO1Q9BQS8 1478 aa13.97□□□□□ -0.17
CDK4-213ENST00000552713 KIAA1107Q9UPP5 1409 aa13.95□□□□□ -0.18
CDK4-213ENST00000552713 MED1Q15648 1581 aaPredicted RBP13.95□□□□□ -0.18
CDK4-213ENST00000552713 NEURL4Q96JN8 1562 aa13.95□□□□□ -0.18
CDK4-213ENST00000552713 A2ML1A8K2U0 1454 aa13.93□□□□□ -0.18
CDK4-213ENST00000552713 HSPA1LP34931 641 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms