RNA–Protein interactions for RNA: ENST00000552656.5

RNF41-211, Transcript of ring finger protein 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF41, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-211ENST00000552656 SCAPERQ9BY12 1400 aa17.77■□□□□ 0.44
RNF41-211ENST00000552656 PLCH2O75038 1416 aa17.76■□□□□ 0.43
RNF41-211ENST00000552656 ARHGEF12Q9NZN5 1544 aa17.74■□□□□ 0.43
RNF41-211ENST00000552656 MYO5CQ9NQX4 1742 aa17.72■□□□□ 0.43
RNF41-211ENST00000552656 CERKQ8TCT0 537 aa17.72■□□□□ 0.43
RNF41-211ENST00000552656 KIF14Q15058 1648 aa17.72■□□□□ 0.43
RNF41-211ENST00000552656 ATP10AO60312 1499 aa17.71■□□□□ 0.43
RNF41-211ENST00000552656 PREX1Q8TCU6 1659 aa17.71■□□□□ 0.42
RNF41-211ENST00000552656 CEBPAP49715 358 aaPredicted RBP17.7■□□□□ 0.42
RNF41-211ENST00000552656 STRCQ7RTU9 1775 aa17.7■□□□□ 0.42
RNF41-211ENST00000552656 C9orf84Q5VXU9 1444 aa17.69■□□□□ 0.42
RNF41-211ENST00000552656 LRRIQ1Q96JM4 1722 aa17.69■□□□□ 0.42
RNF41-211ENST00000552656 ARHGAP35Q9NRY4 1499 aa17.66■□□□□ 0.42
RNF41-211ENST00000552656 KDM5CP41229 1560 aa17.66■□□□□ 0.42
RNF41-211ENST00000552656 EHMT2Q96KQ7 1210 aa17.65■□□□□ 0.42
RNF41-211ENST00000552656 EFCAB2Q5VUJ9 269 aa17.64■□□□□ 0.41
RNF41-211ENST00000552656 AFAP1Q8N556 730 aa17.64■□□□□ 0.41
RNF41-211ENST00000552656 DIP2CQ9Y2E4 1556 aa17.63■□□□□ 0.41
RNF41-211ENST00000552656 ATP1B4Q9UN42 357 aaPredicted RBP17.63■□□□□ 0.41
RNF41-211ENST00000552656 CDC42BPBQ9Y5S2 1711 aa17.63■□□□□ 0.41
RNF41-211ENST00000552656 ZNF518AQ6AHZ1 1483 aa17.62■□□□□ 0.41
RNF41-211ENST00000552656 ABCA6Q8N139 1617 aa17.61■□□□□ 0.41
RNF41-211ENST00000552656 FMN1Q68DA7 1419 aa17.61■□□□□ 0.41
RNF41-211ENST00000552656 ARHGAP5Q13017 1502 aa17.61■□□□□ 0.41
RNF41-211ENST00000552656 TROQ12816 1431 aaPredicted RBP17.6■□□□□ 0.41
RNF41-211ENST00000552656 C3P01024 1663 aa17.6■□□□□ 0.41
RNF41-211ENST00000552656 SETD1BQ9UPS6 1966 aaKnown RBP17.6■□□□□ 0.41
RNF41-211ENST00000552656 REREQ9P2R6 1566 aa17.58■□□□□ 0.41
RNF41-211ENST00000552656 UHRF1BP1Q6BDS2 1440 aa17.56■□□□□ 0.4
RNF41-211ENST00000552656 UBTFP17480 764 aaKnown RBP17.56■□□□□ 0.4
RNF41-211ENST00000552656 ILDR2Q71H61 639 aa17.56■□□□□ 0.4
RNF41-211ENST00000552656 TRAPPC8Q9Y2L5 1435 aa17.55■□□□□ 0.4
RNF41-211ENST00000552656 PREX2Q70Z35 1606 aa17.54■□□□□ 0.4
RNF41-211ENST00000552656 CDK11AQ9UQ88 783 aaPredicted RBP17.54■□□□□ 0.4
RNF41-211ENST00000552656 MLH3Q9UHC1 1453 aa17.54■□□□□ 0.4
RNF41-211ENST00000552656 ITSN2Q9NZM3 1697 aa17.54■□□□□ 0.4
RNF41-211ENST00000552656 ABCC1P33527 1531 aa17.53■□□□□ 0.4
RNF41-211ENST00000552656 KIDINS220Q9ULH0 1771 aa17.53■□□□□ 0.4
RNF41-211ENST00000552656 AGLP35573 1532 aa17.52■□□□□ 0.4
RNF41-211ENST00000552656 CLIP1P30622 1438 aa17.51■□□□□ 0.39
RNF41-211ENST00000552656 CDC42BPAQ5VT25 1732 aa17.5■□□□□ 0.39
RNF41-211ENST00000552656 MYT1LQ9UL68 1186 aa17.5■□□□□ 0.39
RNF41-211ENST00000552656 DMRT2Q9Y5R5 561 aa17.5■□□□□ 0.39
RNF41-211ENST00000552656 LTBP4Q8N2S1 1624 aa17.5■□□□□ 0.39
RNF41-211ENST00000552656 PTPRTO14522 1441 aa17.49■□□□□ 0.39
RNF41-211ENST00000552656 DISP3Q9P2K9 1392 aa17.49■□□□□ 0.39
RNF41-211ENST00000552656 NCOA1Q15788 1441 aa17.45■□□□□ 0.38
RNF41-211ENST00000552656 SAMD9LQ8IVG5 1584 aa17.44■□□□□ 0.38
RNF41-211ENST00000552656 CASKIN1Q8WXD9 1431 aa17.43■□□□□ 0.38
RNF41-211ENST00000552656 MROH2AA6NES4 1674 aa17.42■□□□□ 0.38
RNF41-211ENST00000552656 SPATA31D1Q6ZQQ2 1576 aa17.41■□□□□ 0.38
RNF41-211ENST00000552656 CCDC18Q5T9S5 1454 aa17.41■□□□□ 0.38
RNF41-211ENST00000552656 SUPT6HQ7KZ85 1726 aaKnown RBP17.41■□□□□ 0.38
RNF41-211ENST00000552656 CAMSAP1Q5T5Y3 1602 aa17.4■□□□□ 0.38
RNF41-211ENST00000552656 SOCS7O14512 581 aa17.4■□□□□ 0.38
RNF41-211ENST00000552656 CHIC1Q5VXU3 224 aa17.4■□□□□ 0.38
RNF41-211ENST00000552656 CNTLNQ9NXG0 1405 aa17.39■□□□□ 0.38
RNF41-211ENST00000552656 SYCP2Q9BX26 1530 aa17.39■□□□□ 0.37
RNF41-211ENST00000552656 ESF1Q9H501 851 aaKnown RBP17.38■□□□□ 0.37
RNF41-211ENST00000552656 CLTCQ00610 1675 aaKnown RBP17.37■□□□□ 0.37
RNF41-211ENST00000552656 ZMYM3Q14202 1370 aa17.37■□□□□ 0.37
RNF41-211ENST00000552656 IQSEC2Q5JU85 1478 aa17.37■□□□□ 0.37
RNF41-211ENST00000552656 GPATCH8Q9UKJ3 1502 aaKnown RBP17.37■□□□□ 0.37
RNF41-211ENST00000552656 NPATQ14207 1427 aa17.36■□□□□ 0.37
RNF41-211ENST00000552656 HNRNPMP52272 730 aaKnown RBP eCLIP17.35■□□□□ 0.37
RNF41-211ENST00000552656 ZNF777Q9ULD5 760 aaPredicted RBP17.35■□□□□ 0.37
RNF41-211ENST00000552656 NCKAP5LQ9HCH0 1330 aa17.35■□□□□ 0.37
RNF41-211ENST00000552656 PLXNC1O60486 1568 aa17.35■□□□□ 0.37
RNF41-211ENST00000552656 ZNF142P52746 1687 aaPredicted RBP17.34■□□□□ 0.37
RNF41-211ENST00000552656 MYO3AQ8NEV4 1616 aa17.34■□□□□ 0.37
RNF41-211ENST00000552656 INO80Q9ULG1 1556 aaPredicted RBP17.34■□□□□ 0.37
RNF41-211ENST00000552656 ATP7AQ04656 1500 aa17.33■□□□□ 0.37
RNF41-211ENST00000552656 FYCO1Q9BQS8 1478 aa17.33■□□□□ 0.37
RNF41-211ENST00000552656 ZNF335Q9H4Z2 1342 aaPredicted RBP17.33■□□□□ 0.36
RNF41-211ENST00000552656 SPAG9O60271 1321 aaKnown RBP17.32■□□□□ 0.36
RNF41-211ENST00000552656 PTPRKQ15262 1439 aa17.3■□□□□ 0.36
RNF41-211ENST00000552656 CEP170BQ9Y4F5 1589 aaPredicted RBP17.29■□□□□ 0.36
RNF41-211ENST00000552656 A2MP01023 1474 aa17.29■□□□□ 0.36
RNF41-211ENST00000552656 TCOF1Q13428 1488 aaKnown RBP17.29■□□□□ 0.36
RNF41-211ENST00000552656 KIAA1107Q9UPP5 1409 aa17.28■□□□□ 0.36
RNF41-211ENST00000552656 PLA2R1Q13018 1463 aa17.27■□□□□ 0.36
RNF41-211ENST00000552656 GGT6Q6P531 493 aa17.25■□□□□ 0.35
RNF41-211ENST00000552656 ADGBQ8N7X0 1667 aa17.24■□□□□ 0.35
RNF41-211ENST00000552656 CFDP1Q9UEE9 299 aaPredicted RBP17.24■□□□□ 0.35
RNF41-211ENST00000552656 ZNF644Q9H582 1327 aaPredicted RBP17.23■□□□□ 0.35
RNF41-211ENST00000552656 UBAP1LF5GYI3 381 aa17.23■□□□□ 0.35
RNF41-211ENST00000552656 PLEKHH2Q8IVE3 1493 aa17.23■□□□□ 0.35
RNF41-211ENST00000552656 DNMT1P26358 1616 aaKnown RBP17.22■□□□□ 0.35
RNF41-211ENST00000552656 PKD2Q13563 968 aa17.22■□□□□ 0.35
RNF41-211ENST00000552656 TIAM1Q13009 1591 aa17.22■□□□□ 0.35
RNF41-211ENST00000552656 MBD5Q9P267 1494 aa17.21■□□□□ 0.35
RNF41-211ENST00000552656 CCNB3Q8WWL7 1395 aa17.21■□□□□ 0.35
RNF41-211ENST00000552656 NEURL4Q96JN8 1562 aa17.19■□□□□ 0.34
RNF41-211ENST00000552656 A2ML1A8K2U0 1454 aa17.18■□□□□ 0.34
RNF41-211ENST00000552656 POLR1AO95602 1720 aaPredicted RBP17.18■□□□□ 0.34
RNF41-211ENST00000552656 PPP6R1Q9UPN7 881 aa17.17■□□□□ 0.34
RNF41-211ENST00000552656 MTUS2Q5JR59 1369 aa17.16■□□□□ 0.34
RNF41-211ENST00000552656 FBXO31Q5XUX0 539 aaPredicted RBP17.15■□□□□ 0.34
RNF41-211ENST00000552656 DHX29Q7Z478 1369 aaKnown RBP17.14■□□□□ 0.33
RNF41-211ENST00000552656 RTEL1-TNFRSF6BF6WH68 1400 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms