RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 SIGLEC1Q9BZZ2 1709 aa28.24■■■□□ 2.11
CACNB3-222ENST00000552465 EFCAB2Q5VUJ9 269 aa28.19■■■□□ 2.1
CACNB3-222ENST00000552465 ATP1B4Q9UN42 357 aaPredicted RBP28.18■■■□□ 2.1
CACNB3-222ENST00000552465 ATP10AO60312 1499 aa28.17■■■□□ 2.1
CACNB3-222ENST00000552465 CERKQ8TCT0 537 aa28.16■■■□□ 2.1
CACNB3-222ENST00000552465 CDK11AQ9UQ88 783 aaPredicted RBP28.14■■■□□ 2.1
CACNB3-222ENST00000552465 C9orf84Q5VXU9 1444 aa28.13■■■□□ 2.09
CACNB3-222ENST00000552465 FMN1Q68DA7 1419 aa28.12■■■□□ 2.09
CACNB3-222ENST00000552465 UBTFP17480 764 aaKnown RBP28.12■■■□□ 2.09
CACNB3-222ENST00000552465 ARHGEF12Q9NZN5 1544 aa28.12■■■□□ 2.09
CACNB3-222ENST00000552465 FER1L4A9Z1Z3 1794 aa28.1■■■□□ 2.09
CACNB3-222ENST00000552465 EHMT2Q96KQ7 1210 aa28.1■■■□□ 2.09
CACNB3-222ENST00000552465 CEBPAP49715 358 aaPredicted RBP28.09■■■□□ 2.09
CACNB3-222ENST00000552465 AFAP1Q8N556 730 aa28.06■■■□□ 2.08
CACNB3-222ENST00000552465 ARHGAP35Q9NRY4 1499 aa28.05■■■□□ 2.08
CACNB3-222ENST00000552465 ZNF518AQ6AHZ1 1483 aa28.03■■■□□ 2.08
CACNB3-222ENST00000552465 MYO5CQ9NQX4 1742 aa28.03■■■□□ 2.08
CACNB3-222ENST00000552465 TROQ12816 1431 aaPredicted RBP28.02■■■□□ 2.08
CACNB3-222ENST00000552465 KIF14Q15058 1648 aa28■■■□□ 2.07
CACNB3-222ENST00000552465 MYT1LQ9UL68 1186 aa27.99■■■□□ 2.07
CACNB3-222ENST00000552465 ARHGAP5Q13017 1502 aa27.98■■■□□ 2.07
CACNB3-222ENST00000552465 DMRT2Q9Y5R5 561 aa27.98■■■□□ 2.07
CACNB3-222ENST00000552465 PREX1Q8TCU6 1659 aa27.97■■■□□ 2.07
CACNB3-222ENST00000552465 KDM5CP41229 1560 aa27.96■■■□□ 2.07
CACNB3-222ENST00000552465 CLIP1P30622 1438 aa27.96■■■□□ 2.07
CACNB3-222ENST00000552465 UHRF1BP1Q6BDS2 1440 aa27.92■■■□□ 2.06
CACNB3-222ENST00000552465 DIP2CQ9Y2E4 1556 aa27.9■■■□□ 2.06
CACNB3-222ENST00000552465 MLH3Q9UHC1 1453 aa27.89■■■□□ 2.06
CACNB3-222ENST00000552465 REREQ9P2R6 1566 aa27.88■■■□□ 2.05
CACNB3-222ENST00000552465 STRCQ7RTU9 1775 aa27.86■■■□□ 2.05
CACNB3-222ENST00000552465 TRAPPC8Q9Y2L5 1435 aa27.85■■■□□ 2.05
CACNB3-222ENST00000552465 ESF1Q9H501 851 aaKnown RBP27.84■■■□□ 2.05
CACNB3-222ENST00000552465 SETD1BQ9UPS6 1966 aaKnown RBP27.83■■■□□ 2.05
CACNB3-222ENST00000552465 AGLP35573 1532 aa27.82■■■□□ 2.04
CACNB3-222ENST00000552465 ABCA6Q8N139 1617 aa27.82■■■□□ 2.04
CACNB3-222ENST00000552465 CDC42BPBQ9Y5S2 1711 aa27.82■■■□□ 2.04
CACNB3-222ENST00000552465 LRRIQ1Q96JM4 1722 aa27.81■■■□□ 2.04
CACNB3-222ENST00000552465 PTPRTO14522 1441 aa27.81■■■□□ 2.04
CACNB3-222ENST00000552465 CHIC1Q5VXU3 224 aa27.8■■■□□ 2.04
CACNB3-222ENST00000552465 ABCC1P33527 1531 aa27.78■■■□□ 2.04
CACNB3-222ENST00000552465 CASKIN1Q8WXD9 1431 aa27.78■■■□□ 2.04
CACNB3-222ENST00000552465 C3P01024 1663 aa27.76■■■□□ 2.03
CACNB3-222ENST00000552465 PREX2Q70Z35 1606 aa27.76■■■□□ 2.03
CACNB3-222ENST00000552465 CCDC18Q5T9S5 1454 aa27.76■■■□□ 2.03
CACNB3-222ENST00000552465 DISP3Q9P2K9 1392 aa27.74■■■□□ 2.03
CACNB3-222ENST00000552465 CNTLNQ9NXG0 1405 aa27.73■■■□□ 2.03
CACNB3-222ENST00000552465 ITSN2Q9NZM3 1697 aa27.72■■■□□ 2.03
CACNB3-222ENST00000552465 ILDR2Q71H61 639 aa27.71■■■□□ 2.03
CACNB3-222ENST00000552465 KIDINS220Q9ULH0 1771 aa27.7■■■□□ 2.02
CACNB3-222ENST00000552465 ZNF777Q9ULD5 760 aaPredicted RBP27.69■■■□□ 2.02
CACNB3-222ENST00000552465 NCOA1Q15788 1441 aa27.67■■■□□ 2.02
CACNB3-222ENST00000552465 LTBP4Q8N2S1 1624 aa27.66■■■□□ 2.02
CACNB3-222ENST00000552465 ZMYM3Q14202 1370 aa27.64■■■□□ 2.02
CACNB3-222ENST00000552465 HNRNPMP52272 730 aaKnown RBP eCLIP27.64■■■□□ 2.02
CACNB3-222ENST00000552465 NPATQ14207 1427 aa27.64■■■□□ 2.02
CACNB3-222ENST00000552465 SAMD9LQ8IVG5 1584 aa27.64■■■□□ 2.01
CACNB3-222ENST00000552465 SPAG9O60271 1321 aaKnown RBP27.64■■■□□ 2.01
CACNB3-222ENST00000552465 CDC42BPAQ5VT25 1732 aa27.63■■■□□ 2.01
CACNB3-222ENST00000552465 SOCS7O14512 581 aa27.61■■■□□ 2.01
CACNB3-222ENST00000552465 GPATCH8Q9UKJ3 1502 aaKnown RBP27.61■■■□□ 2.01
CACNB3-222ENST00000552465 FYCO1Q9BQS8 1478 aa27.6■■■□□ 2.01
CACNB3-222ENST00000552465 IQSEC2Q5JU85 1478 aa27.58■■■□□ 2.01
CACNB3-222ENST00000552465 SYCP2Q9BX26 1530 aa27.57■■■□□ 2
CACNB3-222ENST00000552465 CAMSAP1Q5T5Y3 1602 aa27.56■■■□□ 2
CACNB3-222ENST00000552465 NCKAP5LQ9HCH0 1330 aa27.56■■■□□ 2
CACNB3-222ENST00000552465 KIAA1107Q9UPP5 1409 aa27.56■■■□□ 2
CACNB3-222ENST00000552465 CFDP1Q9UEE9 299 aaPredicted RBP27.55■■■□□ 2
CACNB3-222ENST00000552465 MROH2AA6NES4 1674 aa27.54■■■□□ 2
CACNB3-222ENST00000552465 ATP7AQ04656 1500 aa27.51■■□□□ 1.99
CACNB3-222ENST00000552465 A2MP01023 1474 aa27.51■■□□□ 1.99
CACNB3-222ENST00000552465 PLEKHH2Q8IVE3 1493 aa27.51■■□□□ 1.99
CACNB3-222ENST00000552465 SUPT6HQ7KZ85 1726 aaKnown RBP27.5■■□□□ 1.99
CACNB3-222ENST00000552465 CCNB3Q8WWL7 1395 aa27.49■■□□□ 1.99
CACNB3-222ENST00000552465 ZNF335Q9H4Z2 1342 aaPredicted RBP27.49■■□□□ 1.99
CACNB3-222ENST00000552465 PKD2Q13563 968 aa27.49■■□□□ 1.99
CACNB3-222ENST00000552465 GGT6Q6P531 493 aa27.49■■□□□ 1.99
CACNB3-222ENST00000552465 SPATA31D1Q6ZQQ2 1576 aa27.48■■□□□ 1.99
CACNB3-222ENST00000552465 PTPRKQ15262 1439 aa27.48■■□□□ 1.99
CACNB3-222ENST00000552465 PLXNC1O60486 1568 aa27.47■■□□□ 1.99
CACNB3-222ENST00000552465 PPP6R1Q9UPN7 881 aa27.46■■□□□ 1.99
CACNB3-222ENST00000552465 PLA2R1Q13018 1463 aa27.44■■□□□ 1.98
CACNB3-222ENST00000552465 INO80Q9ULG1 1556 aaPredicted RBP27.44■■□□□ 1.98
CACNB3-222ENST00000552465 CLTCQ00610 1675 aaKnown RBP27.44■■□□□ 1.98
CACNB3-222ENST00000552465 UBAP1LF5GYI3 381 aa27.42■■□□□ 1.98
CACNB3-222ENST00000552465 MTUS2Q5JR59 1369 aa27.41■■□□□ 1.98
CACNB3-222ENST00000552465 ZNF644Q9H582 1327 aaPredicted RBP27.41■■□□□ 1.98
CACNB3-222ENST00000552465 TCOF1Q13428 1488 aaKnown RBP27.4■■□□□ 1.98
CACNB3-222ENST00000552465 MYO3AQ8NEV4 1616 aa27.4■■□□□ 1.98
CACNB3-222ENST00000552465 CEP170BQ9Y4F5 1589 aaPredicted RBP27.39■■□□□ 1.98
CACNB3-222ENST00000552465 ZNF142P52746 1687 aaPredicted RBP27.38■■□□□ 1.97
CACNB3-222ENST00000552465 MBD5Q9P267 1494 aa27.34■■□□□ 1.97
CACNB3-222ENST00000552465 RTEL1-TNFRSF6BF6WH68 1400 aa27.32■■□□□ 1.96
CACNB3-222ENST00000552465 A2ML1A8K2U0 1454 aa27.32■■□□□ 1.96
CACNB3-222ENST00000552465 ADGBQ8N7X0 1667 aa27.31■■□□□ 1.96
CACNB3-222ENST00000552465 DHX29Q7Z478 1369 aaKnown RBP27.31■■□□□ 1.96
CACNB3-222ENST00000552465 TIAM1Q13009 1591 aa27.27■■□□□ 1.96
CACNB3-222ENST00000552465 FBXO31Q5XUX0 539 aaPredicted RBP27.27■■□□□ 1.96
CACNB3-222ENST00000552465 KIF3BO15066 747 aa27.26■■□□□ 1.95
CACNB3-222ENST00000552465 DNMT1P26358 1616 aaKnown RBP27.25■■□□□ 1.95
CACNB3-222ENST00000552465 CEP162Q5TB80 1403 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms