RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 MLECQ14165 292 aa36.12■■■■□ 3.37
SMARCD1-212ENST00000551966 EHMT2Q96KQ7 1210 aa36.12■■■■□ 3.37
SMARCD1-212ENST00000551966 ATP1B4Q9UN42 357 aaPredicted RBP36.09■■■■□ 3.37
SMARCD1-212ENST00000551966 UBTFP17480 764 aaKnown RBP36.06■■■■□ 3.36
SMARCD1-212ENST00000551966 EFCAB2Q5VUJ9 269 aa36.03■■■■□ 3.36
SMARCD1-212ENST00000551966 FMN1Q68DA7 1419 aa36■■■■□ 3.35
SMARCD1-212ENST00000551966 ATP10AO60312 1499 aa35.99■■■■□ 3.35
SMARCD1-212ENST00000551966 ARHGAP35Q9NRY4 1499 aa35.99■■■■□ 3.35
SMARCD1-212ENST00000551966 CDK11AQ9UQ88 783 aaPredicted RBP35.96■■■■□ 3.35
SMARCD1-212ENST00000551966 FER1L4A9Z1Z3 1794 aa35.94■■■■□ 3.34
SMARCD1-212ENST00000551966 ARHGEF12Q9NZN5 1544 aa35.92■■■■□ 3.34
SMARCD1-212ENST00000551966 C9orf84Q5VXU9 1444 aa35.91■■■■□ 3.34
SMARCD1-212ENST00000551966 MYO5CQ9NQX4 1742 aa35.91■■■■□ 3.34
SMARCD1-212ENST00000551966 AFAP1Q8N556 730 aa35.91■■■■□ 3.34
SMARCD1-212ENST00000551966 KIF14Q15058 1648 aa35.9■■■■□ 3.34
SMARCD1-212ENST00000551966 CEBPAP49715 358 aaPredicted RBP35.9■■■■□ 3.34
SMARCD1-212ENST00000551966 TROQ12816 1431 aaPredicted RBP35.87■■■■□ 3.33
SMARCD1-212ENST00000551966 CERKQ8TCT0 537 aa35.85■■■■□ 3.33
SMARCD1-212ENST00000551966 ZNF518AQ6AHZ1 1483 aa35.82■■■■□ 3.32
SMARCD1-212ENST00000551966 ARHGAP5Q13017 1502 aa35.8■■■■□ 3.32
SMARCD1-212ENST00000551966 CHIC1Q5VXU3 224 aa35.8■■■■□ 3.32
SMARCD1-212ENST00000551966 LRRIQ1Q96JM4 1722 aa35.78■■■■□ 3.32
SMARCD1-212ENST00000551966 KDM5CP41229 1560 aa35.78■■■■□ 3.32
SMARCD1-212ENST00000551966 CLIP1P30622 1438 aa35.75■■■■□ 3.31
SMARCD1-212ENST00000551966 MYT1LQ9UL68 1186 aa35.74■■■■□ 3.31
SMARCD1-212ENST00000551966 PREX1Q8TCU6 1659 aa35.72■■■■□ 3.31
SMARCD1-212ENST00000551966 CDC42BPBQ9Y5S2 1711 aa35.71■■■■□ 3.31
SMARCD1-212ENST00000551966 DIP2CQ9Y2E4 1556 aa35.7■■■■□ 3.31
SMARCD1-212ENST00000551966 MLH3Q9UHC1 1453 aa35.67■■■■□ 3.3
SMARCD1-212ENST00000551966 TRAPPC8Q9Y2L5 1435 aa35.66■■■■□ 3.3
SMARCD1-212ENST00000551966 STRCQ7RTU9 1775 aa35.64■■■■□ 3.3
SMARCD1-212ENST00000551966 REREQ9P2R6 1566 aa35.64■■■■□ 3.3
SMARCD1-212ENST00000551966 ABCA6Q8N139 1617 aa35.62■■■■□ 3.29
SMARCD1-212ENST00000551966 UHRF1BP1Q6BDS2 1440 aa35.6■■■■□ 3.29
SMARCD1-212ENST00000551966 CASKIN1Q8WXD9 1431 aa35.6■■■■□ 3.29
SMARCD1-212ENST00000551966 DMRT2Q9Y5R5 561 aa35.6■■■■□ 3.29
SMARCD1-212ENST00000551966 SETD1BQ9UPS6 1966 aaKnown RBP35.6■■■■□ 3.29
SMARCD1-212ENST00000551966 PREX2Q70Z35 1606 aa35.57■■■■□ 3.29
SMARCD1-212ENST00000551966 ABCC1P33527 1531 aa35.57■■■■□ 3.28
SMARCD1-212ENST00000551966 AGLP35573 1532 aa35.56■■■■□ 3.28
SMARCD1-212ENST00000551966 CCDC18Q5T9S5 1454 aa35.54■■■■□ 3.28
SMARCD1-212ENST00000551966 C3P01024 1663 aa35.53■■■■□ 3.28
SMARCD1-212ENST00000551966 ITSN2Q9NZM3 1697 aa35.52■■■■□ 3.28
SMARCD1-212ENST00000551966 KIDINS220Q9ULH0 1771 aa35.49■■■■□ 3.27
SMARCD1-212ENST00000551966 ESF1Q9H501 851 aaKnown RBP35.49■■■■□ 3.27
SMARCD1-212ENST00000551966 CDC42BPAQ5VT25 1732 aa35.46■■■■□ 3.27
SMARCD1-212ENST00000551966 ZNF777Q9ULD5 760 aaPredicted RBP35.44■■■■□ 3.26
SMARCD1-212ENST00000551966 PTPRTO14522 1441 aa35.43■■■■□ 3.26
SMARCD1-212ENST00000551966 SAMD9LQ8IVG5 1584 aa35.39■■■■□ 3.26
SMARCD1-212ENST00000551966 HNRNPMP52272 730 aaKnown RBP eCLIP35.39■■■■□ 3.26
SMARCD1-212ENST00000551966 GPATCH8Q9UKJ3 1502 aaKnown RBP35.37■■■■□ 3.25
SMARCD1-212ENST00000551966 FYCO1Q9BQS8 1478 aa35.37■■■■□ 3.25
SMARCD1-212ENST00000551966 CNTLNQ9NXG0 1405 aa35.37■■■■□ 3.25
SMARCD1-212ENST00000551966 SPAG9O60271 1321 aaKnown RBP35.33■■■■□ 3.25
SMARCD1-212ENST00000551966 ZMYM3Q14202 1370 aa35.32■■■■□ 3.24
SMARCD1-212ENST00000551966 SYCP2Q9BX26 1530 aa35.32■■■■□ 3.24
SMARCD1-212ENST00000551966 NCOA1Q15788 1441 aa35.3■■■■□ 3.24
SMARCD1-212ENST00000551966 LTBP4Q8N2S1 1624 aa35.29■■■■□ 3.24
SMARCD1-212ENST00000551966 NPATQ14207 1427 aa35.26■■■■□ 3.24
SMARCD1-212ENST00000551966 ILDR2Q71H61 639 aa35.26■■■■□ 3.24
SMARCD1-212ENST00000551966 CFDP1Q9UEE9 299 aaPredicted RBP35.26■■■■□ 3.24
SMARCD1-212ENST00000551966 DISP3Q9P2K9 1392 aa35.25■■■■□ 3.23
SMARCD1-212ENST00000551966 KIAA1107Q9UPP5 1409 aa35.24■■■■□ 3.23
SMARCD1-212ENST00000551966 SUPT6HQ7KZ85 1726 aaKnown RBP35.24■■■■□ 3.23
SMARCD1-212ENST00000551966 MROH2AA6NES4 1674 aa35.24■■■■□ 3.23
SMARCD1-212ENST00000551966 ATP7AQ04656 1500 aa35.21■■■■□ 3.23
SMARCD1-212ENST00000551966 CAMSAP1Q5T5Y3 1602 aa35.21■■■■□ 3.23
SMARCD1-212ENST00000551966 NCKAP5LQ9HCH0 1330 aa35.2■■■■□ 3.23
SMARCD1-212ENST00000551966 CCNB3Q8WWL7 1395 aa35.19■■■■□ 3.22
SMARCD1-212ENST00000551966 A2MP01023 1474 aa35.17■■■■□ 3.22
SMARCD1-212ENST00000551966 GGT6Q6P531 493 aa35.16■■■■□ 3.22
SMARCD1-212ENST00000551966 PLXNC1O60486 1568 aa35.16■■■■□ 3.22
SMARCD1-212ENST00000551966 PLEKHH2Q8IVE3 1493 aa35.16■■■■□ 3.22
SMARCD1-212ENST00000551966 INO80Q9ULG1 1556 aaPredicted RBP35.15■■■■□ 3.22
SMARCD1-212ENST00000551966 ZNF644Q9H582 1327 aaPredicted RBP35.14■■■■□ 3.22
SMARCD1-212ENST00000551966 CLTCQ00610 1675 aaKnown RBP35.14■■■■□ 3.22
SMARCD1-212ENST00000551966 IQSEC2Q5JU85 1478 aa35.12■■■■□ 3.21
SMARCD1-212ENST00000551966 PTPRKQ15262 1439 aa35.12■■■■□ 3.21
SMARCD1-212ENST00000551966 MTUS2Q5JR59 1369 aa35.11■■■■□ 3.21
SMARCD1-212ENST00000551966 ZNF335Q9H4Z2 1342 aaPredicted RBP35.07■■■■□ 3.21
SMARCD1-212ENST00000551966 PPP6R1Q9UPN7 881 aa35.05■■■■□ 3.2
SMARCD1-212ENST00000551966 MBD5Q9P267 1494 aa35.03■■■■□ 3.2
SMARCD1-212ENST00000551966 SOCS7O14512 581 aa35.03■■■■□ 3.2
SMARCD1-212ENST00000551966 PKD2Q13563 968 aa35.03■■■■□ 3.2
SMARCD1-212ENST00000551966 MYO3AQ8NEV4 1616 aa35.03■■■■□ 3.2
SMARCD1-212ENST00000551966 PLA2R1Q13018 1463 aa35.02■■■■□ 3.2
SMARCD1-212ENST00000551966 ZNF142P52746 1687 aaPredicted RBP35.01■■■■□ 3.19
SMARCD1-212ENST00000551966 TIAM1Q13009 1591 aa35■■■■□ 3.19
SMARCD1-212ENST00000551966 CEP170BQ9Y4F5 1589 aaPredicted RBP35■■■■□ 3.19
SMARCD1-212ENST00000551966 TCOF1Q13428 1488 aaKnown RBP34.99■■■■□ 3.19
SMARCD1-212ENST00000551966 ADGBQ8N7X0 1667 aa34.98■■■■□ 3.19
SMARCD1-212ENST00000551966 RTEL1-TNFRSF6BF6WH68 1400 aa34.95■■■■□ 3.19
SMARCD1-212ENST00000551966 DHX29Q7Z478 1369 aaKnown RBP34.94■■■■□ 3.18
SMARCD1-212ENST00000551966 SPATA31D1Q6ZQQ2 1576 aa34.94■■■■□ 3.18
SMARCD1-212ENST00000551966 UBAP1LF5GYI3 381 aa34.93■■■■□ 3.18
SMARCD1-212ENST00000551966 CEP162Q5TB80 1403 aa34.9■■■■□ 3.18
SMARCD1-212ENST00000551966 EHBP1L1Q8N3D4 1523 aa34.9■■■■□ 3.18
SMARCD1-212ENST00000551966 FBXO31Q5XUX0 539 aaPredicted RBP34.89■■■■□ 3.18
SMARCD1-212ENST00000551966 A2ML1A8K2U0 1454 aa34.88■■■■□ 3.17
SMARCD1-212ENST00000551966 DNMT1P26358 1616 aaKnown RBP34.86■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms