RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 CDK11AQ9UQ88 783 aaPredicted RBP18.17■□□□□ 0.5
CACNB3-219ENST00000551544 NUP153P49790 1475 aaKnown RBP18.17■□□□□ 0.5
CACNB3-219ENST00000551544 ABCC5O15440 1437 aa18.16■□□□□ 0.5
CACNB3-219ENST00000551544 HNRNPUQ00839 825 aaKnown RBP eCLIP18.15■□□□□ 0.5
CACNB3-219ENST00000551544 SLC4A1APQ9BWU0 796 aaKnown RBP18.14■□□□□ 0.5
CACNB3-219ENST00000551544 ROCK1Q13464 1354 aa18.14■□□□□ 0.49
CACNB3-219ENST00000551544 ANP32EQ9BTT0 268 aa18.14■□□□□ 0.49
CACNB3-219ENST00000551544 GRIN2AQ12879 1464 aa18.13■□□□□ 0.49
CACNB3-219ENST00000551544 ANKRD30BQ9BXX2 1392 aa18.13■□□□□ 0.49
CACNB3-219ENST00000551544 RAPGEF6Q8TEU7 1601 aa18.12■□□□□ 0.49
CACNB3-219ENST00000551544 FBLN2P98095 1184 aa18.12■□□□□ 0.49
CACNB3-219ENST00000551544 C11orf95C9JLR9 678 aaPredicted RBP18.11■□□□□ 0.49
CACNB3-219ENST00000551544 NBPF8Q3BBV2 869 aa18.11■□□□□ 0.49
CACNB3-219ENST00000551544 CHMP7Q8WUX9 453 aaPredicted RBP18.11■□□□□ 0.49
CACNB3-219ENST00000551544 PRG4Q92954 1404 aaPredicted RBP18.11■□□□□ 0.49
CACNB3-219ENST00000551544 DNMT1P26358 1616 aaKnown RBP18.11■□□□□ 0.49
CACNB3-219ENST00000551544 ZNF777Q9ULD5 760 aaPredicted RBP18.1■□□□□ 0.49
CACNB3-219ENST00000551544 CFDP1Q9UEE9 299 aaPredicted RBP18.1■□□□□ 0.49
CACNB3-219ENST00000551544 EIF4G3O43432 1585 aaKnown RBP18.09■□□□□ 0.49
CACNB3-219ENST00000551544 RPRD2Q5VT52 1461 aaKnown RBP18.08■□□□□ 0.49
CACNB3-219ENST00000551544 CNTLNQ9NXG0 1405 aa18.07■□□□□ 0.48
CACNB3-219ENST00000551544 PLB1Q6P1J6 1458 aa18.06■□□□□ 0.48
CACNB3-219ENST00000551544 TROQ12816 1431 aaPredicted RBP18.06■□□□□ 0.48
CACNB3-219ENST00000551544 CCDC7Q96M83 1385 aa18.05■□□□□ 0.48
CACNB3-219ENST00000551544 CCDC184Q52MB2 194 aa18.05■□□□□ 0.48
CACNB3-219ENST00000551544 ERCC6Q03468 1493 aa18.04■□□□□ 0.48
CACNB3-219ENST00000551544 NCOA1Q15788 1441 aa18.04■□□□□ 0.48
CACNB3-219ENST00000551544 CAMSAP2Q08AD1 1489 aa18.04■□□□□ 0.48
CACNB3-219ENST00000551544 TEX14Q8IWB6 1497 aa18.04■□□□□ 0.48
CACNB3-219ENST00000551544 PRKRIP1Q9H875 184 aaPredicted RBP18.01■□□□□ 0.47
CACNB3-219ENST00000551544 IRX6P78412 446 aaPredicted RBP18.01■□□□□ 0.47
CACNB3-219ENST00000551544 GPATCH8Q9UKJ3 1502 aaKnown RBP18■□□□□ 0.47
CACNB3-219ENST00000551544 FAM9BQ8IZU0 186 aa18■□□□□ 0.47
CACNB3-219ENST00000551544 JPH4Q96JJ6 628 aa18■□□□□ 0.47
CACNB3-219ENST00000551544 CEP170Q5SW79 1584 aa18■□□□□ 0.47
CACNB3-219ENST00000551544 MAGI1Q96QZ7 1491 aaPredicted RBP18■□□□□ 0.47
CACNB3-219ENST00000551544 PZPP20742 1482 aa17.99■□□□□ 0.47
CACNB3-219ENST00000551544 ZNF326Q5BKZ1 582 aaKnown RBP17.99■□□□□ 0.47
CACNB3-219ENST00000551544 KIF7Q2M1P5 1343 aa17.99■□□□□ 0.47
CACNB3-219ENST00000551544 SYNJ2O15056 1496 aa17.98■□□□□ 0.47
CACNB3-219ENST00000551544 MRS2Q9HD23 443 aa17.98■□□□□ 0.47
CACNB3-219ENST00000551544 KIF14Q15058 1648 aa17.98■□□□□ 0.47
CACNB3-219ENST00000551544 CARMIL2Q6F5E8 1435 aa17.97■□□□□ 0.47
CACNB3-219ENST00000551544 PKD2Q13563 968 aa17.97■□□□□ 0.47
CACNB3-219ENST00000551544 SPATA31E1Q6ZUB1 1445 aa17.95■□□□□ 0.46
CACNB3-219ENST00000551544 ITSN2Q9NZM3 1697 aa17.95■□□□□ 0.46
CACNB3-219ENST00000551544 POLR3GLQ9BT43 218 aa17.94■□□□□ 0.46
CACNB3-219ENST00000551544 ANKRD30AQ9BXX3 1397 aa17.94■□□□□ 0.46
CACNB3-219ENST00000551544 PLEKHD1A6NEE1 506 aa17.94■□□□□ 0.46
CACNB3-219ENST00000551544 PRKCSHP14314 528 aaPredicted RBP17.94■□□□□ 0.46
CACNB3-219ENST00000551544 CNGB1Q14028 1251 aaPredicted RBP17.94■□□□□ 0.46
CACNB3-219ENST00000551544 KIAA1107Q9UPP5 1409 aa17.93■□□□□ 0.46
CACNB3-219ENST00000551544 RBM19Q9Y4C8 960 aaKnown RBP17.92■□□□□ 0.46
CACNB3-219ENST00000551544 ADGBQ8N7X0 1667 aa17.91■□□□□ 0.46
CACNB3-219ENST00000551544 ANKRD50Q9ULJ7 1429 aa17.91■□□□□ 0.46
CACNB3-219ENST00000551544 ADGRL2O95490 1459 aa17.9■□□□□ 0.46
CACNB3-219ENST00000551544 ADCY10Q96PN6 1610 aa17.89■□□□□ 0.45
CACNB3-219ENST00000551544 NUP160Q12769 1436 aa17.89■□□□□ 0.45
CACNB3-219ENST00000551544 NUP155O75694 1391 aa17.87■□□□□ 0.45
CACNB3-219ENST00000551544 USP47Q96K76 1375 aa17.87■□□□□ 0.45
CACNB3-219ENST00000551544 BCL11AQ9H165 835 aa17.87■□□□□ 0.45
CACNB3-219ENST00000551544 CROCC2H7BZ55 1655 aa17.86■□□□□ 0.45
CACNB3-219ENST00000551544 MBD5Q9P267 1494 aa17.86■□□□□ 0.45
CACNB3-219ENST00000551544 TSPY4P0CV99 314 aa17.85■□□□□ 0.45
CACNB3-219ENST00000551544 TSPY10P0CW01 314 aa17.85■□□□□ 0.45
CACNB3-219ENST00000551544 ATP10BO94823 1461 aa17.85■□□□□ 0.45
CACNB3-219ENST00000551544 C9orf84Q5VXU9 1444 aa17.84■□□□□ 0.45
CACNB3-219ENST00000551544 ZBED9Q6R2W3 1325 aa17.84■□□□□ 0.45
CACNB3-219ENST00000551544 HNRNPMP52272 730 aaKnown RBP eCLIP17.84■□□□□ 0.45
CACNB3-219ENST00000551544 KDM2AQ9Y2K7 1162 aa17.82■□□□□ 0.44
CACNB3-219ENST00000551544 ABCC10Q5T3U5 1492 aa17.82■□□□□ 0.44
CACNB3-219ENST00000551544 ABCA8O94911 1581 aa17.82■□□□□ 0.44
CACNB3-219ENST00000551544 POLR1AO95602 1720 aaPredicted RBP17.82■□□□□ 0.44
CACNB3-219ENST00000551544 CDC42BPAQ5VT25 1732 aa17.81■□□□□ 0.44
CACNB3-219ENST00000551544 DHX29Q7Z478 1369 aaKnown RBP17.8■□□□□ 0.44
CACNB3-219ENST00000551544 CARD11Q9BXL7 1154 aa17.8■□□□□ 0.44
CACNB3-219ENST00000551544 BCORL1Q5H9F3 1711 aa17.79■□□□□ 0.44
CACNB3-219ENST00000551544 KIF15Q9NS87 1388 aa17.78■□□□□ 0.44
CACNB3-219ENST00000551544 SHANK2Q9UPX8 1470 aa17.78■□□□□ 0.44
CACNB3-219ENST00000551544 PPP4R2Q9NY27 417 aa17.78■□□□□ 0.44
CACNB3-219ENST00000551544 ERICH6BQ5W0A0 696 aa17.77■□□□□ 0.44
CACNB3-219ENST00000551544 DCAF11Q8TEB1 546 aa17.76■□□□□ 0.43
CACNB3-219ENST00000551544 KDM5CP41229 1560 aa17.76■□□□□ 0.43
CACNB3-219ENST00000551544 PTPRGP23470 1445 aa17.75■□□□□ 0.43
CACNB3-219ENST00000551544 SENP3-EIF4A1A0A087X0R7 540 aa17.75■□□□□ 0.43
CACNB3-219ENST00000551544 UHRF1BP1Q6BDS2 1440 aa17.74■□□□□ 0.43
CACNB3-219ENST00000551544 ARID4BQ4LE39 1312 aaPredicted RBP17.73■□□□□ 0.43
CACNB3-219ENST00000551544 RALGAPBQ86X10 1494 aa17.73■□□□□ 0.43
CACNB3-219ENST00000551544 ST20-MTHFSA0A0A6YYL1 179 aa17.73■□□□□ 0.43
CACNB3-219ENST00000551544 B4GALNT3Q6L9W6 998 aa17.73■□□□□ 0.43
CACNB3-219ENST00000551544 TMC1Q8TDI8 760 aa17.7■□□□□ 0.42
CACNB3-219ENST00000551544 ARHGEF12Q9NZN5 1544 aa17.69■□□□□ 0.42
CACNB3-219ENST00000551544 ROCK2O75116 1388 aaKnown RBP17.69■□□□□ 0.42
CACNB3-219ENST00000551544 KDM5DQ9BY66 1539 aa17.69■□□□□ 0.42
CACNB3-219ENST00000551544 CCDC141Q6ZP82 1450 aa17.67■□□□□ 0.42
CACNB3-219ENST00000551544 ARHGEF5Q12774 1597 aa17.67■□□□□ 0.42
CACNB3-219ENST00000551544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.67■□□□□ 0.42
CACNB3-219ENST00000551544 RGL3Q3MIN7 710 aa17.67■□□□□ 0.42
CACNB3-219ENST00000551544 SAMD9LQ8IVG5 1584 aa17.66■□□□□ 0.42
CACNB3-219ENST00000551544 PNISRQ8TF01 805 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms