RNA–Protein interactions for RNA: ENST00000550651.5

RACGAP1-220, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-220ENST00000550651 ATP1B4Q9UN42 357 aaPredicted RBP26.86■■□□□ 1.89
RACGAP1-220ENST00000550651 ARHGAP35Q9NRY4 1499 aa26.85■■□□□ 1.89
RACGAP1-220ENST00000550651 HSPA2P54652 639 aa26.84■■□□□ 1.89
RACGAP1-220ENST00000550651 EFCAB2Q5VUJ9 269 aa26.84■■□□□ 1.89
RACGAP1-220ENST00000550651 PLPPR3Q6T4P5 718 aa26.84■■□□□ 1.89
RACGAP1-220ENST00000550651 EHMT2Q96KQ7 1210 aa26.84■■□□□ 1.89
RACGAP1-220ENST00000550651 MLECQ14165 292 aa26.83■■□□□ 1.89
RACGAP1-220ENST00000550651 MYO5CQ9NQX4 1742 aa26.82■■□□□ 1.88
RACGAP1-220ENST00000550651 CDK11AQ9UQ88 783 aaPredicted RBP26.82■■□□□ 1.88
RACGAP1-220ENST00000550651 ATP10AO60312 1499 aa26.81■■□□□ 1.88
RACGAP1-220ENST00000550651 FER1L4A9Z1Z3 1794 aa26.81■■□□□ 1.88
RACGAP1-220ENST00000550651 KIF14Q15058 1648 aa26.79■■□□□ 1.88
RACGAP1-220ENST00000550651 C9orf84Q5VXU9 1444 aa26.78■■□□□ 1.88
RACGAP1-220ENST00000550651 ARHGEF12Q9NZN5 1544 aa26.78■■□□□ 1.88
RACGAP1-220ENST00000550651 TROQ12816 1431 aaPredicted RBP26.76■■□□□ 1.87
RACGAP1-220ENST00000550651 ZNF518AQ6AHZ1 1483 aa26.74■■□□□ 1.87
RACGAP1-220ENST00000550651 ARHGAP5Q13017 1502 aa26.71■■□□□ 1.87
RACGAP1-220ENST00000550651 CLIP1P30622 1438 aa26.7■■□□□ 1.86
RACGAP1-220ENST00000550651 KDM5CP41229 1560 aa26.7■■□□□ 1.86
RACGAP1-220ENST00000550651 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
RACGAP1-220ENST00000550651 AFAP1Q8N556 730 aa26.69■■□□□ 1.86
RACGAP1-220ENST00000550651 LRRIQ1Q96JM4 1722 aa26.69■■□□□ 1.86
RACGAP1-220ENST00000550651 CEBPAP49715 358 aaPredicted RBP26.65■■□□□ 1.86
RACGAP1-220ENST00000550651 PREX1Q8TCU6 1659 aa26.65■■□□□ 1.86
RACGAP1-220ENST00000550651 CDC42BPBQ9Y5S2 1711 aa26.63■■□□□ 1.85
RACGAP1-220ENST00000550651 CERKQ8TCT0 537 aa26.63■■□□□ 1.85
RACGAP1-220ENST00000550651 DIP2CQ9Y2E4 1556 aa26.63■■□□□ 1.85
RACGAP1-220ENST00000550651 REREQ9P2R6 1566 aa26.61■■□□□ 1.85
RACGAP1-220ENST00000550651 MYT1LQ9UL68 1186 aa26.6■■□□□ 1.85
RACGAP1-220ENST00000550651 MLH3Q9UHC1 1453 aa26.6■■□□□ 1.85
RACGAP1-220ENST00000550651 CASKIN1Q8WXD9 1431 aa26.58■■□□□ 1.85
RACGAP1-220ENST00000550651 PREX2Q70Z35 1606 aa26.57■■□□□ 1.84
RACGAP1-220ENST00000550651 CCDC18Q5T9S5 1454 aa26.57■■□□□ 1.84
RACGAP1-220ENST00000550651 ABCA6Q8N139 1617 aa26.56■■□□□ 1.84
RACGAP1-220ENST00000550651 TRAPPC8Q9Y2L5 1435 aa26.56■■□□□ 1.84
RACGAP1-220ENST00000550651 ABCC1P33527 1531 aa26.55■■□□□ 1.84
RACGAP1-220ENST00000550651 UHRF1BP1Q6BDS2 1440 aa26.53■■□□□ 1.84
RACGAP1-220ENST00000550651 AGLP35573 1532 aa26.53■■□□□ 1.84
RACGAP1-220ENST00000550651 STRCQ7RTU9 1775 aa26.51■■□□□ 1.83
RACGAP1-220ENST00000550651 ITSN2Q9NZM3 1697 aa26.51■■□□□ 1.83
RACGAP1-220ENST00000550651 DMRT2Q9Y5R5 561 aa26.51■■□□□ 1.83
RACGAP1-220ENST00000550651 SETD1BQ9UPS6 1966 aaKnown RBP26.51■■□□□ 1.83
RACGAP1-220ENST00000550651 C3P01024 1663 aa26.48■■□□□ 1.83
RACGAP1-220ENST00000550651 CDC42BPAQ5VT25 1732 aa26.47■■□□□ 1.83
RACGAP1-220ENST00000550651 KIDINS220Q9ULH0 1771 aa26.46■■□□□ 1.83
RACGAP1-220ENST00000550651 ESF1Q9H501 851 aaKnown RBP26.45■■□□□ 1.82
RACGAP1-220ENST00000550651 FYCO1Q9BQS8 1478 aa26.44■■□□□ 1.82
RACGAP1-220ENST00000550651 SAMD9LQ8IVG5 1584 aa26.4■■□□□ 1.82
RACGAP1-220ENST00000550651 CNTLNQ9NXG0 1405 aa26.39■■□□□ 1.82
RACGAP1-220ENST00000550651 PTPRTO14522 1441 aa26.39■■□□□ 1.81
RACGAP1-220ENST00000550651 ZNF777Q9ULD5 760 aaPredicted RBP26.38■■□□□ 1.81
RACGAP1-220ENST00000550651 GPATCH8Q9UKJ3 1502 aaKnown RBP26.38■■□□□ 1.81
RACGAP1-220ENST00000550651 SYCP2Q9BX26 1530 aa26.34■■□□□ 1.81
RACGAP1-220ENST00000550651 SPAG9O60271 1321 aaKnown RBP26.33■■□□□ 1.81
RACGAP1-220ENST00000550651 HNRNPMP52272 730 aaKnown RBP eCLIP26.32■■□□□ 1.89e-9■■□□□ 14.1
RACGAP1-220ENST00000550651 MROH2AA6NES4 1674 aa26.3■■□□□ 1.8
RACGAP1-220ENST00000550651 NPATQ14207 1427 aa26.3■■□□□ 1.8
RACGAP1-220ENST00000550651 KIAA1107Q9UPP5 1409 aa26.3■■□□□ 1.8
RACGAP1-220ENST00000550651 NCOA1Q15788 1441 aa26.29■■□□□ 1.8
RACGAP1-220ENST00000550651 ZMYM3Q14202 1370 aa26.28■■□□□ 1.8
RACGAP1-220ENST00000550651 PLEKHH2Q8IVE3 1493 aa26.28■■□□□ 1.8
RACGAP1-220ENST00000550651 CFDP1Q9UEE9 299 aaPredicted RBP26.27■■□□□ 1.8
RACGAP1-220ENST00000550651 ATP7AQ04656 1500 aa26.27■■□□□ 1.8
RACGAP1-220ENST00000550651 SUPT6HQ7KZ85 1726 aaKnown RBP26.26■■□□□ 1.79
RACGAP1-220ENST00000550651 LTBP4Q8N2S1 1624 aa26.26■■□□□ 1.79
RACGAP1-220ENST00000550651 INO80Q9ULG1 1556 aaPredicted RBP26.25■■□□□ 1.79
RACGAP1-220ENST00000550651 PLXNC1O60486 1568 aa26.24■■□□□ 1.79
RACGAP1-220ENST00000550651 CCNB3Q8WWL7 1395 aa26.24■■□□□ 1.79
RACGAP1-220ENST00000550651 A2MP01023 1474 aa26.23■■□□□ 1.79
RACGAP1-220ENST00000550651 CAMSAP1Q5T5Y3 1602 aa26.22■■□□□ 1.79
RACGAP1-220ENST00000550651 MTUS2Q5JR59 1369 aa26.2■■□□□ 1.78
RACGAP1-220ENST00000550651 CLTCQ00610 1675 aaKnown RBP26.19■■□□□ 1.78
RACGAP1-220ENST00000550651 IQSEC2Q5JU85 1478 aa26.19■■□□□ 1.78
RACGAP1-220ENST00000550651 DISP3Q9P2K9 1392 aa26.17■■□□□ 1.78
RACGAP1-220ENST00000550651 PTPRKQ15262 1439 aa26.15■■□□□ 1.78
RACGAP1-220ENST00000550651 GGT6Q6P531 493 aa26.15■■□□□ 1.78
RACGAP1-220ENST00000550651 MYO3AQ8NEV4 1616 aa26.14■■□□□ 1.77
RACGAP1-220ENST00000550651 NCKAP5LQ9HCH0 1330 aa26.14■■□□□ 1.77
RACGAP1-220ENST00000550651 ZNF142P52746 1687 aaPredicted RBP26.13■■□□□ 1.77
RACGAP1-220ENST00000550651 ADGBQ8N7X0 1667 aa26.13■■□□□ 1.77
RACGAP1-220ENST00000550651 PPP6R1Q9UPN7 881 aa26.13■■□□□ 1.77
RACGAP1-220ENST00000550651 ZNF644Q9H582 1327 aaPredicted RBP26.13■■□□□ 1.77
RACGAP1-220ENST00000550651 TIAM1Q13009 1591 aa26.12■■□□□ 1.77
RACGAP1-220ENST00000550651 PLA2R1Q13018 1463 aa26.11■■□□□ 1.77
RACGAP1-220ENST00000550651 MBD5Q9P267 1494 aa26.11■■□□□ 1.77
RACGAP1-220ENST00000550651 PKD2Q13563 968 aa26.1■■□□□ 1.77
RACGAP1-220ENST00000550651 ILDR2Q71H61 639 aa26.1■■□□□ 1.77
RACGAP1-220ENST00000550651 CEP170BQ9Y4F5 1589 aaPredicted RBP26.1■■□□□ 1.77
RACGAP1-220ENST00000550651 EHBP1L1Q8N3D4 1523 aa26.09■■□□□ 1.77
RACGAP1-220ENST00000550651 RTEL1-TNFRSF6BF6WH68 1400 aa26.08■■□□□ 1.77
RACGAP1-220ENST00000550651 TCOF1Q13428 1488 aaKnown RBP26.08■■□□□ 1.77
RACGAP1-220ENST00000550651 ZNF335Q9H4Z2 1342 aaPredicted RBP26.07■■□□□ 1.76
RACGAP1-220ENST00000550651 CEP162Q5TB80 1403 aa26.06■■□□□ 1.76
RACGAP1-220ENST00000550651 DHX29Q7Z478 1369 aaKnown RBP26.04■■□□□ 1.76
RACGAP1-220ENST00000550651 SPATA31D1Q6ZQQ2 1576 aa26.02■■□□□ 1.76
RACGAP1-220ENST00000550651 A2ML1A8K2U0 1454 aa26■■□□□ 1.75
RACGAP1-220ENST00000550651 SOCS7O14512 581 aa25.99■■□□□ 1.75
RACGAP1-220ENST00000550651 DNMT1P26358 1616 aaKnown RBP25.98■■□□□ 1.75
RACGAP1-220ENST00000550651 CCDC141Q6ZP82 1450 aa25.96■■□□□ 1.75
RACGAP1-220ENST00000550651 UBAP1LF5GYI3 381 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms