RNA–Protein interactions for RNA: ENST00000550444.1

HCFC2-205, Transcript of host cell factor C2, humanhuman

TSL 4

Gene HCFC2, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-205ENST00000550444 ZMYM4Q5VZL5 1548 aa28.42■■■□□ 2.14
HCFC2-205ENST00000550444 MAGI2Q86UL8 1455 aa28.4■■■□□ 2.14
HCFC2-205ENST00000550444 EFCAB2Q5VUJ9 269 aa28.4■■■□□ 2.14
HCFC2-205ENST00000550444 CDK11AQ9UQ88 783 aaPredicted RBP28.4■■■□□ 2.14
HCFC2-205ENST00000550444 HECW1Q76N89 1606 aa28.39■■■□□ 2.13
HCFC2-205ENST00000550444 FMN1Q68DA7 1419 aa28.37■■■□□ 2.13
HCFC2-205ENST00000550444 SIGLEC1Q9BZZ2 1709 aa28.34■■■□□ 2.13
HCFC2-205ENST00000550444 MYT1LQ9UL68 1186 aa28.33■■■□□ 2.13
HCFC2-205ENST00000550444 ARHGAP35Q9NRY4 1499 aa28.33■■■□□ 2.13
HCFC2-205ENST00000550444 ATP10AO60312 1499 aa28.31■■■□□ 2.12
HCFC2-205ENST00000550444 AFAP1Q8N556 730 aa28.27■■■□□ 2.12
HCFC2-205ENST00000550444 CEBPAP49715 358 aaPredicted RBP28.26■■■□□ 2.11
HCFC2-205ENST00000550444 C9orf84Q5VXU9 1444 aa28.26■■■□□ 2.11
HCFC2-205ENST00000550444 CHIC1Q5VXU3 224 aa28.25■■■□□ 2.11
HCFC2-205ENST00000550444 TROQ12816 1431 aaPredicted RBP28.24■■■□□ 2.11
HCFC2-205ENST00000550444 KIF14Q15058 1648 aa28.23■■■□□ 2.11
HCFC2-205ENST00000550444 CLIP1P30622 1438 aa28.23■■■□□ 2.11
HCFC2-205ENST00000550444 MYO5CQ9NQX4 1742 aa28.23■■■□□ 2.11
HCFC2-205ENST00000550444 ARHGAP5Q13017 1502 aa28.23■■■□□ 2.11
HCFC2-205ENST00000550444 FER1L4A9Z1Z3 1794 aa28.22■■■□□ 2.11
HCFC2-205ENST00000550444 ARHGEF12Q9NZN5 1544 aa28.2■■■□□ 2.1
HCFC2-205ENST00000550444 CERKQ8TCT0 537 aa28.19■■■□□ 2.1
HCFC2-205ENST00000550444 ZNF518AQ6AHZ1 1483 aa28.19■■■□□ 2.1
HCFC2-205ENST00000550444 KDM5CP41229 1560 aa28.09■■■□□ 2.09
HCFC2-205ENST00000550444 ESF1Q9H501 851 aaKnown RBP28.08■■■□□ 2.09
HCFC2-205ENST00000550444 TRAPPC8Q9Y2L5 1435 aa28.06■■■□□ 2.08
HCFC2-205ENST00000550444 LRRIQ1Q96JM4 1722 aa28.05■■■□□ 2.08
HCFC2-205ENST00000550444 DMRT2Q9Y5R5 561 aa28.05■■■□□ 2.08
HCFC2-205ENST00000550444 DIP2CQ9Y2E4 1556 aa28.04■■■□□ 2.08
HCFC2-205ENST00000550444 UHRF1BP1Q6BDS2 1440 aa28.04■■■□□ 2.08
HCFC2-205ENST00000550444 PREX1Q8TCU6 1659 aa28.03■■■□□ 2.08
HCFC2-205ENST00000550444 MLH3Q9UHC1 1453 aa28.02■■■□□ 2.08
HCFC2-205ENST00000550444 CASKIN1Q8WXD9 1431 aa28.02■■■□□ 2.08
HCFC2-205ENST00000550444 ZNF777Q9ULD5 760 aaPredicted RBP28.02■■■□□ 2.08
HCFC2-205ENST00000550444 CDC42BPBQ9Y5S2 1711 aa28.01■■■□□ 2.07
HCFC2-205ENST00000550444 CCDC18Q5T9S5 1454 aa28.01■■■□□ 2.07
HCFC2-205ENST00000550444 ABCA6Q8N139 1617 aa27.98■■■□□ 2.07
HCFC2-205ENST00000550444 ABCC1P33527 1531 aa27.97■■■□□ 2.07
HCFC2-205ENST00000550444 PREX2Q70Z35 1606 aa27.96■■■□□ 2.07
HCFC2-205ENST00000550444 REREQ9P2R6 1566 aa27.96■■■□□ 2.07
HCFC2-205ENST00000550444 AGLP35573 1532 aa27.92■■■□□ 2.06
HCFC2-205ENST00000550444 HNRNPMP52272 730 aaKnown RBP eCLIP27.91■■■□□ 2.06
HCFC2-205ENST00000550444 SETD1BQ9UPS6 1966 aaKnown RBP27.9■■■□□ 2.06
HCFC2-205ENST00000550444 STRCQ7RTU9 1775 aa27.9■■■□□ 2.06
HCFC2-205ENST00000550444 ITSN2Q9NZM3 1697 aa27.9■■■□□ 2.06
HCFC2-205ENST00000550444 SPAG9O60271 1321 aaKnown RBP27.88■■■□□ 2.05
HCFC2-205ENST00000550444 C3P01024 1663 aa27.87■■■□□ 2.05
HCFC2-205ENST00000550444 FYCO1Q9BQS8 1478 aa27.87■■■□□ 2.05
HCFC2-205ENST00000550444 KIDINS220Q9ULH0 1771 aa27.86■■■□□ 2.05
HCFC2-205ENST00000550444 CNTLNQ9NXG0 1405 aa27.85■■■□□ 2.05
HCFC2-205ENST00000550444 CDC42BPAQ5VT25 1732 aa27.84■■■□□ 2.05
HCFC2-205ENST00000550444 CFDP1Q9UEE9 299 aaPredicted RBP27.83■■■□□ 2.05
HCFC2-205ENST00000550444 PTPRTO14522 1441 aa27.83■■■□□ 2.05
HCFC2-205ENST00000550444 GPATCH8Q9UKJ3 1502 aaKnown RBP27.82■■■□□ 2.04
HCFC2-205ENST00000550444 SAMD9LQ8IVG5 1584 aa27.82■■■□□ 2.04
HCFC2-205ENST00000550444 SYCP2Q9BX26 1530 aa27.8■■■□□ 2.04
HCFC2-205ENST00000550444 ZMYM3Q14202 1370 aa27.79■■■□□ 2.04
HCFC2-205ENST00000550444 CCNB3Q8WWL7 1395 aa27.77■■■□□ 2.04
HCFC2-205ENST00000550444 DISP3Q9P2K9 1392 aa27.75■■■□□ 2.03
HCFC2-205ENST00000550444 GGT6Q6P531 493 aa27.75■■■□□ 2.03
HCFC2-205ENST00000550444 NCOA1Q15788 1441 aa27.74■■■□□ 2.03
HCFC2-205ENST00000550444 MTUS2Q5JR59 1369 aa27.73■■■□□ 2.03
HCFC2-205ENST00000550444 NPATQ14207 1427 aa27.72■■■□□ 2.03
HCFC2-205ENST00000550444 KIAA1107Q9UPP5 1409 aa27.72■■■□□ 2.03
HCFC2-205ENST00000550444 NCKAP5LQ9HCH0 1330 aa27.71■■■□□ 2.03
HCFC2-205ENST00000550444 SUPT6HQ7KZ85 1726 aaKnown RBP27.71■■■□□ 2.03
HCFC2-205ENST00000550444 PLEKHH2Q8IVE3 1493 aa27.7■■■□□ 2.03
HCFC2-205ENST00000550444 ATP7AQ04656 1500 aa27.7■■■□□ 2.02
HCFC2-205ENST00000550444 A2MP01023 1474 aa27.7■■■□□ 2.02
HCFC2-205ENST00000550444 ZNF644Q9H582 1327 aaPredicted RBP27.67■■■□□ 2.02
HCFC2-205ENST00000550444 CAMSAP1Q5T5Y3 1602 aa27.67■■■□□ 2.02
HCFC2-205ENST00000550444 LTBP4Q8N2S1 1624 aa27.66■■■□□ 2.02
HCFC2-205ENST00000550444 ILDR2Q71H61 639 aa27.65■■■□□ 2.02
HCFC2-205ENST00000550444 MROH2AA6NES4 1674 aa27.65■■■□□ 2.02
HCFC2-205ENST00000550444 CLTCQ00610 1675 aaKnown RBP27.62■■■□□ 2.01
HCFC2-205ENST00000550444 ZNF335Q9H4Z2 1342 aaPredicted RBP27.61■■■□□ 2.01
HCFC2-205ENST00000550444 INO80Q9ULG1 1556 aaPredicted RBP27.6■■■□□ 2.01
HCFC2-205ENST00000550444 PLXNC1O60486 1568 aa27.6■■■□□ 2.01
HCFC2-205ENST00000550444 PTPRKQ15262 1439 aa27.59■■■□□ 2.01
HCFC2-205ENST00000550444 PKD2Q13563 968 aa27.59■■■□□ 2.01
HCFC2-205ENST00000550444 PPP6R1Q9UPN7 881 aa27.58■■■□□ 2.01
HCFC2-205ENST00000550444 IQSEC2Q5JU85 1478 aa27.56■■■□□ 2
HCFC2-205ENST00000550444 UBAP1LF5GYI3 381 aa27.54■■■□□ 2
HCFC2-205ENST00000550444 TIAM1Q13009 1591 aa27.53■■■□□ 2
HCFC2-205ENST00000550444 MBD5Q9P267 1494 aa27.53■■■□□ 2
HCFC2-205ENST00000550444 MYO3AQ8NEV4 1616 aa27.52■■■□□ 2
HCFC2-205ENST00000550444 KIF3BO15066 747 aa27.51■■□□□ 1.99
HCFC2-205ENST00000550444 CEP170BQ9Y4F5 1589 aaPredicted RBP27.51■■□□□ 1.99
HCFC2-205ENST00000550444 PLA2R1Q13018 1463 aa27.51■■□□□ 1.99
HCFC2-205ENST00000550444 DHX29Q7Z478 1369 aaKnown RBP27.5■■□□□ 1.99
HCFC2-205ENST00000550444 SOCS7O14512 581 aa27.5■■□□□ 1.99
HCFC2-205ENST00000550444 EHBP1L1Q8N3D4 1523 aa27.5■■□□□ 1.99
HCFC2-205ENST00000550444 RTEL1-TNFRSF6BF6WH68 1400 aa27.5■■□□□ 1.99
HCFC2-205ENST00000550444 ADGBQ8N7X0 1667 aa27.49■■□□□ 1.99
HCFC2-205ENST00000550444 CEP162Q5TB80 1403 aa27.48■■□□□ 1.99
HCFC2-205ENST00000550444 FBXO31Q5XUX0 539 aaPredicted RBP27.47■■□□□ 1.99
HCFC2-205ENST00000550444 TCOF1Q13428 1488 aaKnown RBP27.46■■□□□ 1.99
HCFC2-205ENST00000550444 ZNF142P52746 1687 aaPredicted RBP27.46■■□□□ 1.99
HCFC2-205ENST00000550444 SPATA31D1Q6ZQQ2 1576 aa27.44■■□□□ 1.98
HCFC2-205ENST00000550444 A2ML1A8K2U0 1454 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms