RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 STAG3Q9UJ98 1225 aa22.62■■□□□ 1.21
ATXN2-219ENST00000550104 CANXP27824 592 aaKnown RBP22.62■■□□□ 1.21
ATXN2-219ENST00000550104 EFCAB2Q5VUJ9 269 aa22.62■■□□□ 1.21
ATXN2-219ENST00000550104 SNAPC4Q5SXM2 1469 aa22.61■■□□□ 1.21
ATXN2-219ENST00000550104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.59■■□□□ 1.216e-7■■■□□ 17.1
ATXN2-219ENST00000550104 CC2D1BQ5T0F9 858 aaKnown RBP22.58■■□□□ 1.21
ATXN2-219ENST00000550104 CDK13Q14004 1512 aaKnown RBP22.58■■□□□ 1.21
ATXN2-219ENST00000550104 KNSTRNQ9Y448 316 aa22.55■■□□□ 1.2
ATXN2-219ENST00000550104 ROCK2O75116 1388 aaKnown RBP22.55■■□□□ 1.2
ATXN2-219ENST00000550104 EPRSP07814 1512 aaKnown RBP22.55■■□□□ 1.2
ATXN2-219ENST00000550104 RSPH4AQ5TD94 716 aa22.55■■□□□ 1.2
ATXN2-219ENST00000550104 NAIPQ13075 1403 aa22.54■■□□□ 1.2
ATXN2-219ENST00000550104 PRG4Q92954 1404 aaPredicted RBP22.54■■□□□ 1.2
ATXN2-219ENST00000550104 WDR97A6NE52 1622 aa22.54■■□□□ 1.2
ATXN2-219ENST00000550104 NPM2Q86SE8 214 aaKnown RBP22.53■■□□□ 1.2
ATXN2-219ENST00000550104 IQGAP2Q13576 1575 aa22.52■■□□□ 1.2
ATXN2-219ENST00000550104 HECW1Q76N89 1606 aa22.51■■□□□ 1.19
ATXN2-219ENST00000550104 MIA2Q96PC5 1412 aa22.51■■□□□ 1.19
ATXN2-219ENST00000550104 ESF1Q9H501 851 aaKnown RBP22.51■■□□□ 1.19
ATXN2-219ENST00000550104 RTL5Q5HYW3 569 aaPredicted RBP22.5■■□□□ 1.19
ATXN2-219ENST00000550104 SUPT6HQ7KZ85 1726 aaKnown RBP22.5■■□□□ 1.19
ATXN2-219ENST00000550104 TMF1P82094 1093 aa22.5■■□□□ 1.19
ATXN2-219ENST00000550104 KIAA0586Q9BVV6 1533 aa22.5■■□□□ 1.19
ATXN2-219ENST00000550104 ZNF608Q9ULD9 1512 aaPredicted RBP22.5■■□□□ 1.19
ATXN2-219ENST00000550104 ANP32AP39687 249 aaKnown RBP22.49■■□□□ 1.19
ATXN2-219ENST00000550104 CDCA8Q53HL2 280 aa22.49■■□□□ 1.19
ATXN2-219ENST00000550104 ST20-MTHFSA0A0A6YYL1 179 aa22.48■■□□□ 1.19
ATXN2-219ENST00000550104 PRKRIP1Q9H875 184 aaPredicted RBP22.48■■□□□ 1.19
ATXN2-219ENST00000550104 B4GALNT3Q6L9W6 998 aa22.46■■□□□ 1.19
ATXN2-219ENST00000550104 PPP4R2Q9NY27 417 aa22.46■■□□□ 1.19
ATXN2-219ENST00000550104 WASHC2AQ641Q2 1341 aa22.46■■□□□ 1.19
ATXN2-219ENST00000550104 ANKRD50Q9ULJ7 1429 aa22.45■■□□□ 1.18
ATXN2-219ENST00000550104 SPAG9O60271 1321 aaKnown RBP22.45■■□□□ 1.18
ATXN2-219ENST00000550104 KANK1Q14678 1352 aa22.45■■□□□ 1.18
ATXN2-219ENST00000550104 TROQ12816 1431 aaPredicted RBP22.44■■□□□ 1.18
ATXN2-219ENST00000550104 USP47Q96K76 1375 aa22.44■■□□□ 1.18
ATXN2-219ENST00000550104 KIF15Q9NS87 1388 aa22.44■■□□□ 1.18
ATXN2-219ENST00000550104 KIF3BO15066 747 aa22.43■■□□□ 1.18
ATXN2-219ENST00000550104 GGT6Q6P531 493 aa22.42■■□□□ 1.18
ATXN2-219ENST00000550104 PLPPR3Q6T4P5 718 aa22.41■■□□□ 1.18
ATXN2-219ENST00000550104 NEFMP07197 916 aa22.41■■□□□ 1.18
ATXN2-219ENST00000550104 DAPK1P53355 1430 aa22.4■■□□□ 1.18
ATXN2-219ENST00000550104 CCDC144AA2RUR9 1427 aa22.4■■□□□ 1.18
ATXN2-219ENST00000550104 NBPF8Q3BBV2 869 aa22.4■■□□□ 1.18
ATXN2-219ENST00000550104 CCDC7Q96M83 1385 aa22.39■■□□□ 1.17
ATXN2-219ENST00000550104 KIF7Q2M1P5 1343 aa22.38■■□□□ 1.17
ATXN2-219ENST00000550104 PTPRKQ15262 1439 aa22.38■■□□□ 1.17
ATXN2-219ENST00000550104 PTPN23Q9H3S7 1636 aa22.38■■□□□ 1.17
ATXN2-219ENST00000550104 GRIN2AQ12879 1464 aa22.36■■□□□ 1.17
ATXN2-219ENST00000550104 PLB1Q6P1J6 1458 aa22.36■■□□□ 1.17
ATXN2-219ENST00000550104 KTN1Q86UP2 1357 aaKnown RBP22.36■■□□□ 1.17
ATXN2-219ENST00000550104 MAPKBP1O60336 1514 aa22.36■■□□□ 1.17
ATXN2-219ENST00000550104 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.34■■□□□ 1.17
ATXN2-219ENST00000550104 TNNT2P45379 298 aaPredicted RBP22.33■■□□□ 1.17
ATXN2-219ENST00000550104 RALBP1Q15311 655 aa22.33■■□□□ 1.16
ATXN2-219ENST00000550104 TSHZ2Q9NRE2 1034 aa22.33■■□□□ 1.16
ATXN2-219ENST00000550104 SYNJ2O15056 1496 aa22.33■■□□□ 1.16
ATXN2-219ENST00000550104 BCL11AQ9H165 835 aa22.31■■□□□ 1.16
ATXN2-219ENST00000550104 ABCC5O15440 1437 aa22.29■■□□□ 1.16
ATXN2-219ENST00000550104 CNTLNQ9NXG0 1405 aa22.28■■□□□ 1.16
ATXN2-219ENST00000550104 C9orf84Q5VXU9 1444 aa22.28■■□□□ 1.16
ATXN2-219ENST00000550104 CTTNBP2Q8WZ74 1663 aa22.27■■□□□ 1.16
ATXN2-219ENST00000550104 NEUROD2Q15784 382 aa22.27■■□□□ 1.16
ATXN2-219ENST00000550104 ROCK1Q13464 1354 aa22.26■■□□□ 1.15
ATXN2-219ENST00000550104 THOC2Q8NI27 1593 aaKnown RBP22.26■■□□□ 1.15
ATXN2-219ENST00000550104 RBM19Q9Y4C8 960 aaKnown RBP22.25■■□□□ 1.15
ATXN2-219ENST00000550104 KIAA1107Q9UPP5 1409 aa22.24■■□□□ 1.15
ATXN2-219ENST00000550104 MAGI1Q96QZ7 1491 aaPredicted RBP22.24■■□□□ 1.15
ATXN2-219ENST00000550104 NLRP13Q86W25 1043 aa22.23■■□□□ 1.15
ATXN2-219ENST00000550104 SAFB2Q14151 953 aaKnown RBP eCLIP22.23■■□□□ 1.15
ATXN2-219ENST00000550104 AFAP1Q8N556 730 aa22.21■■□□□ 1.15
ATXN2-219ENST00000550104 NUDCQ9Y266 331 aa22.21■■□□□ 1.15
ATXN2-219ENST00000550104 CFAP43Q8NDM7 1665 aa22.21■■□□□ 1.15
ATXN2-219ENST00000550104 PANK3Q9H999 370 aa22.21■■□□□ 1.15
ATXN2-219ENST00000550104 ARHGAP5Q13017 1502 aa22.21■■□□□ 1.15
ATXN2-219ENST00000550104 KIF21AQ7Z4S6 1674 aa22.2■■□□□ 1.14
ATXN2-219ENST00000550104 ANKRD30BQ9BXX2 1392 aa22.2■■□□□ 1.14
ATXN2-219ENST00000550104 UGGT2Q9NYU1 1516 aa22.2■■□□□ 1.14
ATXN2-219ENST00000550104 ARHGEF11O15085 1522 aa22.2■■□□□ 1.14
ATXN2-219ENST00000550104 CAMSAP2Q08AD1 1489 aa22.19■■□□□ 1.14
ATXN2-219ENST00000550104 MYBBP1AQ9BQG0 1328 aaKnown RBP22.19■■□□□ 1.14
ATXN2-219ENST00000550104 ZBED9Q6R2W3 1325 aa22.18■■□□□ 1.14
ATXN2-219ENST00000550104 CFAP53Q96M91 514 aa22.18■■□□□ 1.14
ATXN2-219ENST00000550104 ZBTB47Q9UFB7 747 aaPredicted RBP22.18■■□□□ 1.14
ATXN2-219ENST00000550104 POGKQ9P215 609 aa22.18■■□□□ 1.14
ATXN2-219ENST00000550104 SLC24A1O60721 1099 aa22.17■■□□□ 1.14
ATXN2-219ENST00000550104 CCDC184Q52MB2 194 aa22.17■■□□□ 1.14
ATXN2-219ENST00000550104 ERICH6BQ5W0A0 696 aa22.17■■□□□ 1.14
ATXN2-219ENST00000550104 C11orf95C9JLR9 678 aaPredicted RBP22.16■■□□□ 1.14
ATXN2-219ENST00000550104 NBR1Q14596 966 aa22.16■■□□□ 1.14
ATXN2-219ENST00000550104 NUTM2DQ5VT03 806 aaPredicted RBP22.15■■□□□ 1.14
ATXN2-219ENST00000550104 MLECQ14165 292 aa22.15■■□□□ 1.14
ATXN2-219ENST00000550104 AKNAQ7Z591 1439 aa22.15■■□□□ 1.14
ATXN2-219ENST00000550104 RCAN3Q9UKA8 241 aa22.15■■□□□ 1.14
ATXN2-219ENST00000550104 STK26Q9P289 416 aa22.14■■□□□ 1.14
ATXN2-219ENST00000550104 NCOA1Q15788 1441 aa22.14■■□□□ 1.13
ATXN2-219ENST00000550104 WASHC2CQ9Y4E1 1318 aa22.13■■□□□ 1.13
ATXN2-219ENST00000550104 PPM1GO15355 546 aaPredicted RBP22.13■■□□□ 1.13
ATXN2-219ENST00000550104 NBPF1Q3BBV0 1214 aa22.13■■□□□ 1.13
ATXN2-219ENST00000550104 NUP153P49790 1475 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms