RNA–Protein interactions for RNA: ENST00000550103.2

EFCAB11-203, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-203ENST00000550103 CABP2Q9NPB3 220 aa11.56□□□□□ -0.56
EFCAB11-203ENST00000550103 PDS5BQ9NTI5 1447 aa11.56□□□□□ -0.56
EFCAB11-203ENST00000550103 CEP164Q9UPV0 1460 aa11.56□□□□□ -0.56
EFCAB11-203ENST00000550103 SEMA3EO15041 775 aa11.55□□□□□ -0.56
EFCAB11-203ENST00000550103 PRKAR2AP13861 404 aaKnown RBP11.55□□□□□ -0.56
EFCAB11-203ENST00000550103 PDE4AP27815 886 aa11.55□□□□□ -0.56
EFCAB11-203ENST00000550103 PHF8Q9UPP1 1060 aa11.55□□□□□ -0.56
EFCAB11-203ENST00000550103 CUX2O14529 1486 aa11.55□□□□□ -0.56
EFCAB11-203ENST00000550103 CFTRP13569 1480 aa11.55□□□□□ -0.56
EFCAB11-203ENST00000550103 FANCD2Q9BXW9 1451 aa11.53□□□□□ -0.56
EFCAB11-203ENST00000550103 MRC2Q9UBG0 1479 aa11.52□□□□□ -0.56
EFCAB11-203ENST00000550103 WDR62O43379 1518 aa11.52□□□□□ -0.57
EFCAB11-203ENST00000550103 KIF12Q96FN5 646 aa11.52□□□□□ -0.57
EFCAB11-203ENST00000550103 MAP3K13O43283 966 aa11.51□□□□□ -0.57
EFCAB11-203ENST00000550103 NEUROD2Q15784 382 aa11.51□□□□□ -0.57
EFCAB11-203ENST00000550103 ARIH1Q9Y4X5 557 aaPredicted RBP11.51□□□□□ -0.57
EFCAB11-203ENST00000550103 SLC24A3Q9HC58 644 aa11.5□□□□□ -0.57
EFCAB11-203ENST00000550103 MFSD10Q14728 455 aa11.49□□□□□ -0.57
EFCAB11-203ENST00000550103 LARP6Q9BRS8 491 aaKnown RBP11.49□□□□□ -0.57
EFCAB11-203ENST00000550103 NCKAP5LQ9HCH0 1330 aa11.49□□□□□ -0.57
EFCAB11-203ENST00000550103 ZMYND10O75800 440 aa11.48□□□□□ -0.57
EFCAB11-203ENST00000550103 FXR2P51116 673 aaKnown RBP eCLIP11.48□□□□□ -0.57
EFCAB11-203ENST00000550103 DAXXQ9UER7 740 aaPredicted RBP11.45□□□□□ -0.58
EFCAB11-203ENST00000550103 DDX27Q96GQ7 796 aaKnown RBP11.44□□□□□ -0.58
EFCAB11-203ENST00000550103 CRISPLD2Q9H0B8 497 aa11.44□□□□□ -0.58
EFCAB11-203ENST00000550103 URB2Q14146 1524 aaKnown RBP11.43□□□□□ -0.58
EFCAB11-203ENST00000550103 CAMK2BQ13554 666 aa11.42□□□□□ -0.58
EFCAB11-203ENST00000550103 DNMBPQ6XZF7 1577 aa11.41□□□□□ -0.58
EFCAB11-203ENST00000550103 GOLGA2Q08379 1002 aa11.4□□□□□ -0.58
EFCAB11-203ENST00000550103 BARGINQ6ZT62 677 aa11.4□□□□□ -0.58
EFCAB11-203ENST00000550103 HOMEZQ8IX15 550 aa11.4□□□□□ -0.58
EFCAB11-203ENST00000550103 MS4A4AQ96JQ5 239 aa11.39□□□□□ -0.59
EFCAB11-203ENST00000550103 TOPBP1Q92547 1522 aa11.37□□□□□ -0.59
EFCAB11-203ENST00000550103 AK7Q96M32 723 aa11.35□□□□□ -0.59
EFCAB11-203ENST00000550103 WDR97A6NE52 1622 aa11.35□□□□□ -0.59
EFCAB11-203ENST00000550103 EIF4G3O43432 1585 aaKnown RBP11.34□□□□□ -0.59
EFCAB11-203ENST00000550103 ZRANB1Q9UGI0 708 aa11.33□□□□□ -0.6
EFCAB11-203ENST00000550103 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
EFCAB11-203ENST00000550103 BIVM-ERCC5R4GMW8 1640 aa11.32□□□□□ -0.6
EFCAB11-203ENST00000550103 MKRN3Q13064 507 aaKnown RBP11.32□□□□□ -0.6
EFCAB11-203ENST00000550103 PBRM1Q86U86 1689 aa11.31□□□□□ -0.6
EFCAB11-203ENST00000550103 TMEM106CQ9BVX2 250 aa11.31□□□□□ -0.6
EFCAB11-203ENST00000550103 TARBP1Q13395 1621 aaKnown RBP11.31□□□□□ -0.6
EFCAB11-203ENST00000550103 CUX1P39880 1505 aa11.3□□□□□ -0.6
EFCAB11-203ENST00000550103 GPIHBP1Q8IV16 184 aa11.3□□□□□ -0.6
EFCAB11-203ENST00000550103 KRI1Q8N9T8 703 aaKnown RBP11.29□□□□□ -0.6
EFCAB11-203ENST00000550103 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
EFCAB11-203ENST00000550103 GPHNQ9NQX3 736 aaPredicted RBP11.28□□□□□ -0.6
EFCAB11-203ENST00000550103 CHD1O14646 1710 aa11.28□□□□□ -0.6
EFCAB11-203ENST00000550103 SYNJ1O43426 1573 aa11.28□□□□□ -0.6
EFCAB11-203ENST00000550103 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.61
EFCAB11-203ENST00000550103 FGD5Q6ZNL6 1462 aa11.26□□□□□ -0.61
EFCAB11-203ENST00000550103 IFT140Q96RY7 1462 aa11.26□□□□□ -0.61
EFCAB11-203ENST00000550103 PPP1R15BQ5SWA1 713 aa11.26□□□□□ -0.61
EFCAB11-203ENST00000550103 RBM26Q5T8P6 1007 aaKnown RBP11.26□□□□□ -0.61
EFCAB11-203ENST00000550103 POLA1P09884 1462 aaPredicted RBP11.25□□□□□ -0.61
EFCAB11-203ENST00000550103 TOP2BQ02880 1626 aa11.25□□□□□ -0.61
EFCAB11-203ENST00000550103 SPDYE16A6NNV3 312 aaPredicted RBP11.25□□□□□ -0.61
EFCAB11-203ENST00000550103 CHRDL2Q6WN34 429 aa11.25□□□□□ -0.61
EFCAB11-203ENST00000550103 PHF12Q96QT6 1004 aa11.25□□□□□ -0.61
EFCAB11-203ENST00000550103 MLLT3P42568 568 aaPredicted RBP11.24□□□□□ -0.61
EFCAB11-203ENST00000550103 ILDR1Q86SU0 546 aaPredicted RBP11.22□□□□□ -0.61
EFCAB11-203ENST00000550103 ZNF608Q9ULD9 1512 aaPredicted RBP11.22□□□□□ -0.61
EFCAB11-203ENST00000550103 ABCA5Q8WWZ7 1642 aa11.2□□□□□ -0.62
EFCAB11-203ENST00000550103 PDIA6Q15084 440 aa11.19□□□□□ -0.62
EFCAB11-203ENST00000550103 RAD54L2Q9Y4B4 1467 aa11.19□□□□□ -0.62
EFCAB11-203ENST00000550103 TRIM66O15016 1216 aa11.18□□□□□ -0.62
EFCAB11-203ENST00000550103 TIE1P35590 1138 aa11.18□□□□□ -0.62
EFCAB11-203ENST00000550103 KDM4CQ9H3R0 1056 aa11.18□□□□□ -0.62
EFCAB11-203ENST00000550103 GPBP1L1Q9HC44 474 aaPredicted RBP11.18□□□□□ -0.62
EFCAB11-203ENST00000550103 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.18□□□□□ -0.62
EFCAB11-203ENST00000550103 WRNQ14191 1432 aaPredicted RBP eCLIP11.18□□□□□ -0.62
EFCAB11-203ENST00000550103 IL27Q8NEV9 243 aa11.17□□□□□ -0.62
EFCAB11-203ENST00000550103 DPYSL4O14531 572 aa11.16□□□□□ -0.62
EFCAB11-203ENST00000550103 PDE4DQ08499 809 aa11.16□□□□□ -0.62
EFCAB11-203ENST00000550103 MS4A3Q96HJ5 214 aa11.16□□□□□ -0.62
EFCAB11-203ENST00000550103 EMILIN3Q9NT22 766 aa11.15□□□□□ -0.62
EFCAB11-203ENST00000550103 TRPC6Q9Y210 931 aa11.14□□□□□ -0.63
EFCAB11-203ENST00000550103 SOGA1O94964 1423 aa11.14□□□□□ -0.63
EFCAB11-203ENST00000550103 FOXK1P85037 733 aa11.13□□□□□ -0.63
EFCAB11-203ENST00000550103 TMC2Q8TDI7 906 aa11.13□□□□□ -0.63
EFCAB11-203ENST00000550103 DSG2Q14126 1118 aa11.12□□□□□ -0.63
EFCAB11-203ENST00000550103 ZMYND15Q9H091 742 aa11.12□□□□□ -0.63
EFCAB11-203ENST00000550103 ABCA10Q8WWZ4 1543 aa11.11□□□□□ -0.63
EFCAB11-203ENST00000550103 TTLL13PA6NNM8 815 aa11.11□□□□□ -0.63
EFCAB11-203ENST00000550103 AQRO60306 1485 aaKnown RBP eCLIP11.11□□□□□ -0.63
EFCAB11-203ENST00000550103 SNAPC4Q5SXM2 1469 aa11.1□□□□□ -0.63
EFCAB11-203ENST00000550103 MINK1Q8N4C8 1332 aaPredicted RBP11.09□□□□□ -0.63
EFCAB11-203ENST00000550103 ADAMTS12P58397 1594 aa11.09□□□□□ -0.63
EFCAB11-203ENST00000550103 MICALL2Q8IY33 904 aa11.07□□□□□ -0.64
EFCAB11-203ENST00000550103 GAPVD1Q14C86 1478 aa11.06□□□□□ -0.64
EFCAB11-203ENST00000550103 TDRD9Q8NDG6 1382 aaKnown RBP11.06□□□□□ -0.64
EFCAB11-203ENST00000550103 GPR37O15354 613 aa11.06□□□□□ -0.64
EFCAB11-203ENST00000550103 RSPH6AQ9H0K4 717 aa11.06□□□□□ -0.64
EFCAB11-203ENST00000550103 GRIN2BQ13224 1484 aa11.06□□□□□ -0.64
EFCAB11-203ENST00000550103 MAGI1Q96QZ7 1491 aaPredicted RBP11.06□□□□□ -0.64
EFCAB11-203ENST00000550103 C19orf67A6NJJ6 358 aa11.05□□□□□ -0.64
EFCAB11-203ENST00000550103 CUL7Q14999 1698 aa11.04□□□□□ -0.64
EFCAB11-203ENST00000550103 MAP2K5Q13163 448 aa11.04□□□□□ -0.64
EFCAB11-203ENST00000550103 PLPP6Q8IY26 295 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms