RNA–Protein interactions for RNA: ENST00000549493.6

ANKS1B-215, Transcript of ankyrin repeat and sterile alpha motif domain containing 1B, human

TSL 1 (best) BASIC

Gene ANKS1B, Length 3,328 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANKS1B-215	ENST00000549493	RBM19	Q9Y4C8	960 aa	Known RBP	11.32	□□□□□ -0.6
ANKS1B-215	ENST00000549493	ZNF326	Q5BKZ1	582 aa	Known RBP	11.31	□□□□□ -0.6
ANKS1B-215	ENST00000549493	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.3	□□□□□ -0.6
ANKS1B-215	ENST00000549493	THOC2	Q8NI27	1593 aa	Known RBP	11.29	□□□□□ -0.6
ANKS1B-215	ENST00000549493	FBLN2	P98095	1184 aa		11.29	□□□□□ -0.6
ANKS1B-215	ENST00000549493	PLEKHG5	O94827	1062 aa		11.29	□□□□□ -0.6
ANKS1B-215	ENST00000549493	TARBP1	Q13395	1621 aa	Known RBP	11.28	□□□□□ -0.6
ANKS1B-215	ENST00000549493	ARHGEF11	O15085	1522 aa		11.28	□□□□□ -0.6
ANKS1B-215	ENST00000549493	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.28	□□□□□ -0.6
ANKS1B-215	ENST00000549493	ANP32E	Q9BTT0	268 aa		11.27	□□□□□ -0.61
ANKS1B-215	ENST00000549493	MRS2	Q9HD23	443 aa		11.27	□□□□□ -0.61
ANKS1B-215	ENST00000549493	IQGAP2	Q13576	1575 aa		11.26	□□□□□ -0.61
ANKS1B-215	ENST00000549493	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.25	□□□□□ -0.61
ANKS1B-215	ENST00000549493	TCOF1	Q13428	1488 aa	Known RBP	11.25	□□□□□ -0.61
ANKS1B-215	ENST00000549493	HECW1	Q76N89	1606 aa		11.24	□□□□□ -0.61
ANKS1B-215	ENST00000549493	ABCC5	O15440	1437 aa		11.23	□□□□□ -0.61
ANKS1B-215	ENST00000549493	CCDC7	Q96M83	1385 aa		11.23	□□□□□ -0.61
ANKS1B-215	ENST00000549493	ANKRD30B	Q9BXX2	1392 aa		11.23	□□□□□ -0.61
ANKS1B-215	ENST00000549493	KIF7	Q2M1P5	1343 aa		11.23	□□□□□ -0.61
ANKS1B-215	ENST00000549493	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.23	□□□□□ -0.61
ANKS1B-215	ENST00000549493	DAPK1	P53355	1430 aa		11.23	□□□□□ -0.61
ANKS1B-215	ENST00000549493	PRG4	Q92954	1404 aa	Predicted RBP	11.22	□□□□□ -0.61
ANKS1B-215	ENST00000549493	MIA2	Q96PC5	1412 aa		11.22	□□□□□ -0.61
ANKS1B-215	ENST00000549493	WDR62	O43379	1518 aa		11.22	□□□□□ -0.61
ANKS1B-215	ENST00000549493	CNTLN	Q9NXG0	1405 aa		11.22	□□□□□ -0.61
ANKS1B-215	ENST00000549493	PBRM1	Q86U86	1689 aa		11.2	□□□□□ -0.62
ANKS1B-215	ENST00000549493	B4GALNT3	Q6L9W6	998 aa		11.2	□□□□□ -0.62
ANKS1B-215	ENST00000549493	ADAMTS12	P58397	1594 aa		11.2	□□□□□ -0.62
ANKS1B-215	ENST00000549493	NUP153	P49790	1475 aa	Known RBP	11.19	□□□□□ -0.62
ANKS1B-215	ENST00000549493	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.19	□□□□□ -0.62
ANKS1B-215	ENST00000549493	CDK11A	Q9UQ88	783 aa	Predicted RBP	11.19	□□□□□ -0.62
ANKS1B-215	ENST00000549493	GCC2	Q8IWJ2	1684 aa		11.19	□□□□□ -0.62
ANKS1B-215	ENST00000549493	PKD2	Q13563	968 aa		11.19	□□□□□ -0.62
ANKS1B-215	ENST00000549493	NCOA1	Q15788	1441 aa		11.19	□□□□□ -0.62
ANKS1B-215	ENST00000549493	MSH5	O43196	834 aa		11.19	□□□□□ -0.62
ANKS1B-215	ENST00000549493	DISP1	Q96F81	1524 aa		11.18	□□□□□ -0.62
ANKS1B-215	ENST00000549493	KDM2A	Q9Y2K7	1162 aa		11.18	□□□□□ -0.62
ANKS1B-215	ENST00000549493	RPRD2	Q5VT52	1461 aa	Known RBP	11.17	□□□□□ -0.62
ANKS1B-215	ENST00000549493	PLB1	Q6P1J6	1458 aa		11.17	□□□□□ -0.62
ANKS1B-215	ENST00000549493	MRC2	Q9UBG0	1479 aa		11.17	□□□□□ -0.62
ANKS1B-215	ENST00000549493	AKNA	Q7Z591	1439 aa		11.17	□□□□□ -0.62
ANKS1B-215	ENST00000549493	TEX14	Q8IWB6	1497 aa		11.16	□□□□□ -0.62
ANKS1B-215	ENST00000549493	KIAA0586	Q9BVV6	1533 aa		11.14	□□□□□ -0.63
ANKS1B-215	ENST00000549493	ROCK1	Q13464	1354 aa		11.14	□□□□□ -0.63
ANKS1B-215	ENST00000549493	SPATA31E1	Q6ZUB1	1445 aa		11.13	□□□□□ -0.63
ANKS1B-215	ENST00000549493	KIAA0556	O60303	1618 aa		11.13	□□□□□ -0.63
ANKS1B-215	ENST00000549493	JPH4	Q96JJ6	628 aa		11.12	□□□□□ -0.63
ANKS1B-215	ENST00000549493	PZP	P20742	1482 aa		11.12	□□□□□ -0.63
ANKS1B-215	ENST00000549493	USP47	Q96K76	1375 aa		11.12	□□□□□ -0.63
ANKS1B-215	ENST00000549493	CAMSAP2	Q08AD1	1489 aa		11.12	□□□□□ -0.63
ANKS1B-215	ENST00000549493	PPP4R2	Q9NY27	417 aa		11.12	□□□□□ -0.63
ANKS1B-215	ENST00000549493	GRIN2A	Q12879	1464 aa		11.11	□□□□□ -0.63
ANKS1B-215	ENST00000549493	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
ANKS1B-215	ENST00000549493	DNMT1	P26358	1616 aa	Known RBP	11.11	□□□□□ -0.63
ANKS1B-215	ENST00000549493	ZBED9	Q6R2W3	1325 aa		11.11	□□□□□ -0.63
ANKS1B-215	ENST00000549493	SALL2	Q9Y467	1007 aa	Predicted RBP	11.11	□□□□□ -0.63
ANKS1B-215	ENST00000549493	IFT140	Q96RY7	1462 aa		11.11	□□□□□ -0.63
ANKS1B-215	ENST00000549493	TRO	Q12816	1431 aa	Predicted RBP	11.1	□□□□□ -0.63
ANKS1B-215	ENST00000549493	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.1	□□□□□ -0.63
ANKS1B-215	ENST00000549493	NUP155	O75694	1391 aa		11.1	□□□□□ -0.63
ANKS1B-215	ENST00000549493	RAPGEF6	Q8TEU7	1601 aa		11.1	□□□□□ -0.63
ANKS1B-215	ENST00000549493	CARD11	Q9BXL7	1154 aa		11.1	□□□□□ -0.63
ANKS1B-215	ENST00000549493	KIF14	Q15058	1648 aa		11.09	□□□□□ -0.63
ANKS1B-215	ENST00000549493	PLEKHD1	A6NEE1	506 aa		11.09	□□□□□ -0.63
ANKS1B-215	ENST00000549493	DCAF11	Q8TEB1	546 aa		11.09	□□□□□ -0.63
ANKS1B-215	ENST00000549493	ST20-MTHFS	A0A0A6YYL1	179 aa		11.08	□□□□□ -0.64
ANKS1B-215	ENST00000549493	RGL3	Q3MIN7	710 aa		11.08	□□□□□ -0.64
ANKS1B-215	ENST00000549493	DHX29	Q7Z478	1369 aa	Known RBP	11.08	□□□□□ -0.64
ANKS1B-215	ENST00000549493	ANKRD50	Q9ULJ7	1429 aa		11.08	□□□□□ -0.64
ANKS1B-215	ENST00000549493	KIAA1107	Q9UPP5	1409 aa		11.08	□□□□□ -0.64
ANKS1B-215	ENST00000549493	ANKRD30A	Q9BXX3	1397 aa		11.07	□□□□□ -0.64
ANKS1B-215	ENST00000549493	TMC1	Q8TDI8	760 aa		11.07	□□□□□ -0.64
ANKS1B-215	ENST00000549493	ERCC6	Q03468	1493 aa		11.06	□□□□□ -0.64
ANKS1B-215	ENST00000549493	TSPY4	P0CV99	314 aa		11.06	□□□□□ -0.64
ANKS1B-215	ENST00000549493	TSPY10	P0CW01	314 aa		11.06	□□□□□ -0.64
ANKS1B-215	ENST00000549493	EIF4G3	O43432	1585 aa	Known RBP	11.06	□□□□□ -0.64
ANKS1B-215	ENST00000549493	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
ANKS1B-215	ENST00000549493	BCORL1	Q5H9F3	1711 aa		11.05	□□□□□ -0.64
ANKS1B-215	ENST00000549493	CEP170	Q5SW79	1584 aa		11.04	□□□□□ -0.64
ANKS1B-215	ENST00000549493	PNISR	Q8TF01	805 aa	Known RBP	11.03	□□□□□ -0.64
ANKS1B-215	ENST00000549493	NCBP3	Q53F19	620 aa	Known RBP	11.02	□□□□□ -0.65
ANKS1B-215	ENST00000549493	C9orf84	Q5VXU9	1444 aa		11.01	□□□□□ -0.65
ANKS1B-215	ENST00000549493	NBPF1	Q3BBV0	1214 aa		11.01	□□□□□ -0.65
ANKS1B-215	ENST00000549493	NUDC	Q9Y266	331 aa		11.01	□□□□□ -0.65
ANKS1B-215	ENST00000549493	MBD5	Q9P267	1494 aa		11.01	□□□□□ -0.65
ANKS1B-215	ENST00000549493	FANCI	Q9NVI1	1328 aa		11.01	□□□□□ -0.65
ANKS1B-215	ENST00000549493	CARMIL2	Q6F5E8	1435 aa		11.01	□□□□□ -0.65
ANKS1B-215	ENST00000549493	CCDC136	Q96JN2	1154 aa		11.01	□□□□□ -0.65
ANKS1B-215	ENST00000549493	ERICH6B	Q5W0A0	696 aa		11	□□□□□ -0.65
ANKS1B-215	ENST00000549493	KIF15	Q9NS87	1388 aa		11	□□□□□ -0.65
ANKS1B-215	ENST00000549493	ATP10B	O94823	1461 aa		11	□□□□□ -0.65
ANKS1B-215	ENST00000549493	SYNJ2	O15056	1496 aa		10.99	□□□□□ -0.65
ANKS1B-215	ENST00000549493	PLPPR3	Q6T4P5	718 aa		10.99	□□□□□ -0.65
ANKS1B-215	ENST00000549493	ROCK2	O75116	1388 aa	Known RBP	10.98	□□□□□ -0.65
ANKS1B-215	ENST00000549493	ADGRL2	O95490	1459 aa		10.97	□□□□□ -0.65
ANKS1B-215	ENST00000549493	MAGI1	Q96QZ7	1491 aa	Predicted RBP	10.97	□□□□□ -0.65
ANKS1B-215	ENST00000549493	CC2D1B	Q5T0F9	858 aa	Known RBP	10.97	□□□□□ -0.65
ANKS1B-215	ENST00000549493	SMG6	Q86US8	1419 aa	Known RBP	10.97	□□□□□ -0.65
ANKS1B-215	ENST00000549493	KDM5C	P41229	1560 aa		10.96	□□□□□ -0.65
ANKS1B-215	ENST00000549493	PODXL2	Q9NZ53	605 aa		10.96	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms