RNA–Protein interactions for RNA: ENST00000549442.5

HVCN1-208, Transcript of hydrogen voltage gated channel 1, humanhuman

TSL 2

Gene HVCN1, Length 829 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HVCN1-208ENST00000549442 GOLGA3Q08378 1498 aa13.26□□□□□ -0.29
HVCN1-208ENST00000549442 PHLDB1Q86UU1 1377 aa13.26□□□□□ -0.29
HVCN1-208ENST00000549442 ABCA8O94911 1581 aa13.25□□□□□ -0.29
HVCN1-208ENST00000549442 NEO1Q92859 1461 aa13.25□□□□□ -0.29
HVCN1-208ENST00000549442 POTEAQ6S8J7 498 aa13.25□□□□□ -0.29
HVCN1-208ENST00000549442 ABCA9Q8IUA7 1624 aa13.24□□□□□ -0.29
HVCN1-208ENST00000549442 SAMD9Q5K651 1589 aa13.24□□□□□ -0.29
HVCN1-208ENST00000549442 AKNAQ7Z591 1439 aa13.24□□□□□ -0.29
HVCN1-208ENST00000549442 SENP3Q9H4L4 574 aaPredicted RBP13.24□□□□□ -0.29
HVCN1-208ENST00000549442 P3H3Q8IVL6 736 aa13.23□□□□□ -0.29
HVCN1-208ENST00000549442 ALKQ9UM73 1620 aa13.22□□□□□ -0.29
HVCN1-208ENST00000549442 ZFYVE16Q7Z3T8 1539 aa13.2□□□□□ -0.3
HVCN1-208ENST00000549442 SETD1BQ9UPS6 1966 aaKnown RBP13.2□□□□□ -0.3
HVCN1-208ENST00000549442 ARID3CA6NKF2 412 aa13.19□□□□□ -0.3
HVCN1-208ENST00000549442 NCKAP5LQ9HCH0 1330 aa13.18□□□□□ -0.3
HVCN1-208ENST00000549442 DENND4BO75064 1496 aaPredicted RBP13.18□□□□□ -0.3
HVCN1-208ENST00000549442 FHOD3Q2V2M9 1422 aa13.18□□□□□ -0.3
HVCN1-208ENST00000549442 ZMYM4Q5VZL5 1548 aa13.18□□□□□ -0.3
HVCN1-208ENST00000549442 CAMSAP1Q5T5Y3 1602 aa13.17□□□□□ -0.3
HVCN1-208ENST00000549442 ATP10BO94823 1461 aa13.16□□□□□ -0.3
HVCN1-208ENST00000549442 RANGAP1P46060 587 aaPredicted RBP13.15□□□□□ -0.3
HVCN1-208ENST00000549442 C3P01024 1663 aa13.15□□□□□ -0.31
HVCN1-208ENST00000549442 EFCAB5A4FU69 1503 aa13.14□□□□□ -0.31
HVCN1-208ENST00000549442 EHMT2Q96KQ7 1210 aa13.14□□□□□ -0.31
HVCN1-208ENST00000549442 UPF1Q92900 1129 aaKnown RBP eCLIP13.13□□□□□ -0.31
HVCN1-208ENST00000549442 TOM1O60784 492 aa13.12□□□□□ -0.31
HVCN1-208ENST00000549442 RAPGEF6Q8TEU7 1601 aa13.12□□□□□ -0.31
HVCN1-208ENST00000549442 HECW1Q76N89 1606 aa13.11□□□□□ -0.31
HVCN1-208ENST00000549442 UBTFP17480 764 aaKnown RBP13.11□□□□□ -0.31
HVCN1-208ENST00000549442 NUP153P49790 1475 aaKnown RBP13.1□□□□□ -0.31
HVCN1-208ENST00000549442 ARHGAP35Q9NRY4 1499 aa13.1□□□□□ -0.31
HVCN1-208ENST00000549442 TRAPPC8Q9Y2L5 1435 aa13.05□□□□□ -0.32
HVCN1-208ENST00000549442 C9orf84Q5VXU9 1444 aa13.05□□□□□ -0.32
HVCN1-208ENST00000549442 MAGI2Q86UL8 1455 aa13.04□□□□□ -0.32
HVCN1-208ENST00000549442 ATP10AO60312 1499 aa13.04□□□□□ -0.32
HVCN1-208ENST00000549442 TCOF1Q13428 1488 aaKnown RBP13.03□□□□□ -0.32
HVCN1-208ENST00000549442 PPP6R1Q9UPN7 881 aa12.99□□□□□ -0.33
HVCN1-208ENST00000549442 CPS1P31327 1500 aa12.98□□□□□ -0.33
HVCN1-208ENST00000549442 CDK13Q14004 1512 aaKnown RBP12.98□□□□□ -0.33
HVCN1-208ENST00000549442 LRRIQ1Q96JM4 1722 aa12.98□□□□□ -0.33
HVCN1-208ENST00000549442 PTPRKQ15262 1439 aa12.97□□□□□ -0.33
HVCN1-208ENST00000549442 FMN1Q68DA7 1419 aa12.97□□□□□ -0.33
HVCN1-208ENST00000549442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
HVCN1-208ENST00000549442 HNRNPUL2Q1KMD3 747 aaKnown RBP12.97□□□□□ -0.33
HVCN1-208ENST00000549442 PLA2R1Q13018 1463 aa12.97□□□□□ -0.33
HVCN1-208ENST00000549442 SHANK2Q9UPX8 1470 aa12.97□□□□□ -0.33
HVCN1-208ENST00000549442 PLEKHD1A6NEE1 506 aa12.96□□□□□ -0.33
HVCN1-208ENST00000549442 PKD2Q13563 968 aa12.95□□□□□ -0.34
HVCN1-208ENST00000549442 CFAP74Q9C0B2 1584 aa12.94□□□□□ -0.34
HVCN1-208ENST00000549442 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.94□□□□□ -0.34
HVCN1-208ENST00000549442 ZNF142P52746 1687 aaPredicted RBP12.93□□□□□ -0.34
HVCN1-208ENST00000549442 SCAPERQ9BY12 1400 aa12.92□□□□□ -0.34
HVCN1-208ENST00000549442 MYO3AQ8NEV4 1616 aa12.91□□□□□ -0.34
HVCN1-208ENST00000549442 VWDEQ8N2E2 1590 aa12.91□□□□□ -0.34
HVCN1-208ENST00000549442 SUPT6HQ7KZ85 1726 aaKnown RBP12.91□□□□□ -0.34
HVCN1-208ENST00000549442 NEURL4Q96JN8 1562 aa12.9□□□□□ -0.34
HVCN1-208ENST00000549442 SETBP1Q9Y6X0 1596 aa12.9□□□□□ -0.34
HVCN1-208ENST00000549442 CLIP1P30622 1438 aa12.9□□□□□ -0.34
HVCN1-208ENST00000549442 CASKIN1Q8WXD9 1431 aa12.9□□□□□ -0.34
HVCN1-208ENST00000549442 TRIM52Q96A61 297 aa12.9□□□□□ -0.34
HVCN1-208ENST00000549442 ATP1B4Q9UN42 357 aaPredicted RBP12.9□□□□□ -0.34
HVCN1-208ENST00000549442 CEP170BQ9Y4F5 1589 aaPredicted RBP12.9□□□□□ -0.35
HVCN1-208ENST00000549442 IFFO2Q5TF58 517 aa12.89□□□□□ -0.35
HVCN1-208ENST00000549442 LOC105371045A0A1W2PR82 267 aa12.88□□□□□ -0.35
HVCN1-208ENST00000549442 DIP2CQ9Y2E4 1556 aa12.88□□□□□ -0.35
HVCN1-208ENST00000549442 LRRC7Q96NW7 1537 aa12.88□□□□□ -0.35
HVCN1-208ENST00000549442 NPATQ14207 1427 aa12.88□□□□□ -0.35
HVCN1-208ENST00000549442 KIF14Q15058 1648 aa12.87□□□□□ -0.35
HVCN1-208ENST00000549442 STRCP1A6NGW2 1772 aa12.86□□□□□ -0.35
HVCN1-208ENST00000549442 PLCH2O75038 1416 aa12.86□□□□□ -0.35
HVCN1-208ENST00000549442 TROQ12816 1431 aaPredicted RBP12.86□□□□□ -0.35
HVCN1-208ENST00000549442 RNF17Q9BXT8 1623 aaKnown RBP12.85□□□□□ -0.35
HVCN1-208ENST00000549442 AGLP35573 1532 aa12.84□□□□□ -0.35
HVCN1-208ENST00000549442 ABCA6Q8N139 1617 aa12.84□□□□□ -0.35
HVCN1-208ENST00000549442 CDK11AQ9UQ88 783 aaPredicted RBP12.83□□□□□ -0.36
HVCN1-208ENST00000549442 FYCO1Q9BQS8 1478 aa12.83□□□□□ -0.36
HVCN1-208ENST00000549442 REREQ9P2R6 1566 aa12.82□□□□□ -0.36
HVCN1-208ENST00000549442 CEP162Q5TB80 1403 aa12.82□□□□□ -0.36
HVCN1-208ENST00000549442 POLR1AO95602 1720 aaPredicted RBP12.82□□□□□ -0.36
HVCN1-208ENST00000549442 CCDC18Q5T9S5 1454 aa12.81□□□□□ -0.36
HVCN1-208ENST00000549442 ESF1Q9H501 851 aaKnown RBP12.81□□□□□ -0.36
HVCN1-208ENST00000549442 ZMYM3Q14202 1370 aa12.8□□□□□ -0.36
HVCN1-208ENST00000549442 CNTLNQ9NXG0 1405 aa12.79□□□□□ -0.36
HVCN1-208ENST00000549442 MYO5CQ9NQX4 1742 aa12.79□□□□□ -0.36
HVCN1-208ENST00000549442 CDC42BPBQ9Y5S2 1711 aa12.79□□□□□ -0.36
HVCN1-208ENST00000549442 KDM5CP41229 1560 aa12.79□□□□□ -0.36
HVCN1-208ENST00000549442 AFAP1Q8N556 730 aa12.79□□□□□ -0.36
HVCN1-208ENST00000549442 MROH2AA6NES4 1674 aa12.79□□□□□ -0.36
HVCN1-208ENST00000549442 DNMT1P26358 1616 aaKnown RBP12.78□□□□□ -0.36
HVCN1-208ENST00000549442 EFCAB2Q5VUJ9 269 aa12.76□□□□□ -0.37
HVCN1-208ENST00000549442 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
HVCN1-208ENST00000549442 EP400Q96L91 3159 aa12.76□□□□□ -0.37
HVCN1-208ENST00000549442 LRP6O75581 1613 aa12.75□□□□□ -0.37
HVCN1-208ENST00000549442 CDC42BPAQ5VT25 1732 aa12.75□□□□□ -0.37
HVCN1-208ENST00000549442 PREX2Q70Z35 1606 aa12.73□□□□□ -0.37
HVCN1-208ENST00000549442 ZNF518AQ6AHZ1 1483 aa12.73□□□□□ -0.37
HVCN1-208ENST00000549442 ARHGAP5Q13017 1502 aa12.72□□□□□ -0.37
HVCN1-208ENST00000549442 GPATCH8Q9UKJ3 1502 aaKnown RBP12.72□□□□□ -0.37
HVCN1-208ENST00000549442 A2ML1A8K2U0 1454 aa12.72□□□□□ -0.37
HVCN1-208ENST00000549442 CLTCQ00610 1675 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms