RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 NAIPQ13075 1403 aa15.95■□□□□ 0.14
LINC00661-204ENST00000549354 ERCC6L2Q5T890 1561 aa15.95■□□□□ 0.14
LINC00661-204ENST00000549354 KIF14Q15058 1648 aa15.94■□□□□ 0.14
LINC00661-204ENST00000549354 ABCC10Q5T3U5 1492 aa15.94■□□□□ 0.14
LINC00661-204ENST00000549354 GPATCH8Q9UKJ3 1502 aaKnown RBP15.93■□□□□ 0.14
LINC00661-204ENST00000549354 GCC2Q8IWJ2 1684 aa15.93■□□□□ 0.14
LINC00661-204ENST00000549354 DNMT1P26358 1616 aaKnown RBP15.92■□□□□ 0.14
LINC00661-204ENST00000549354 ABCC2Q92887 1545 aa15.91■□□□□ 0.14
LINC00661-204ENST00000549354 SENP3-EIF4A1A0A087X0R7 540 aa15.91■□□□□ 0.14
LINC00661-204ENST00000549354 SUPT16HQ9Y5B9 1047 aaKnown RBP15.91■□□□□ 0.14
LINC00661-204ENST00000549354 UHRF1BP1LA0JNW5 1464 aa15.91■□□□□ 0.14
LINC00661-204ENST00000549354 ROCK1Q13464 1354 aa15.9■□□□□ 0.14
LINC00661-204ENST00000549354 PLEKHD1A6NEE1 506 aa15.89■□□□□ 0.13
LINC00661-204ENST00000549354 TRIM52Q96A61 297 aa15.89■□□□□ 0.13
LINC00661-204ENST00000549354 DAPK1P53355 1430 aa15.89■□□□□ 0.13
LINC00661-204ENST00000549354 ABCC5O15440 1437 aa15.88■□□□□ 0.13
LINC00661-204ENST00000549354 CDC42BPAQ5VT25 1732 aa15.87■□□□□ 0.13
LINC00661-204ENST00000549354 CAMSAP2Q08AD1 1489 aa15.86■□□□□ 0.13
LINC00661-204ENST00000549354 MYT1Q01538 1121 aa15.83■□□□□ 0.13
LINC00661-204ENST00000549354 CROCC2H7BZ55 1655 aa15.83■□□□□ 0.12
LINC00661-204ENST00000549354 KDM5BQ9UGL1 1544 aa15.82■□□□□ 0.12
LINC00661-204ENST00000549354 ZNF644Q9H582 1327 aaPredicted RBP15.82■□□□□ 0.12
LINC00661-204ENST00000549354 CFDP1Q9UEE9 299 aaPredicted RBP15.82■□□□□ 0.12
LINC00661-204ENST00000549354 ADGRL2O95490 1459 aa15.82■□□□□ 0.12
LINC00661-204ENST00000549354 TIMELESSQ9UNS1 1208 aa15.81■□□□□ 0.12
LINC00661-204ENST00000549354 ADGBQ8N7X0 1667 aa15.8■□□□□ 0.12
LINC00661-204ENST00000549354 PREX2Q70Z35 1606 aa15.8■□□□□ 0.12
LINC00661-204ENST00000549354 IRX6P78412 446 aaPredicted RBP15.79■□□□□ 0.12
LINC00661-204ENST00000549354 KDM6BO15054 1643 aa15.79■□□□□ 0.12
LINC00661-204ENST00000549354 SHANK2Q9UPX8 1470 aa15.78■□□□□ 0.12
LINC00661-204ENST00000549354 ZCCHC11Q5TAX3 1644 aaKnown RBP15.78■□□□□ 0.12
LINC00661-204ENST00000549354 ARHGEF5Q12774 1597 aa15.78■□□□□ 0.12
LINC00661-204ENST00000549354 CDC42BPBQ9Y5S2 1711 aa15.77■□□□□ 0.12
LINC00661-204ENST00000549354 RRP7BPQ9NSQ0 103 aa15.76■□□□□ 0.11
LINC00661-204ENST00000549354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.76■□□□□ 0.11
LINC00661-204ENST00000549354 FKBP8Q14318 412 aa15.76■□□□□ 0.11
LINC00661-204ENST00000549354 NCOA1Q15788 1441 aa15.76■□□□□ 0.11
LINC00661-204ENST00000549354 CHIC2Q9UKJ5 165 aa15.76■□□□□ 0.11
LINC00661-204ENST00000549354 DENND4BO75064 1496 aaPredicted RBP15.75■□□□□ 0.11
LINC00661-204ENST00000549354 TTC37Q6PGP7 1564 aa15.74■□□□□ 0.11
LINC00661-204ENST00000549354 MBD5Q9P267 1494 aa15.74■□□□□ 0.11
LINC00661-204ENST00000549354 POLR3GLQ9BT43 218 aa15.74■□□□□ 0.11
LINC00661-204ENST00000549354 TSHZ2Q9NRE2 1034 aa15.73■□□□□ 0.11
LINC00661-204ENST00000549354 SAMD9LQ8IVG5 1584 aa15.73■□□□□ 0.11
LINC00661-204ENST00000549354 OSCARQ8IYS5 282 aa15.71■□□□□ 0.11
LINC00661-204ENST00000549354 MYO5CQ9NQX4 1742 aa15.7■□□□□ 0.1
LINC00661-204ENST00000549354 ANKRD30AQ9BXX3 1397 aa15.69■□□□□ 0.1
LINC00661-204ENST00000549354 RSPH4AQ5TD94 716 aa15.69■□□□□ 0.1
LINC00661-204ENST00000549354 KIAA1107Q9UPP5 1409 aa15.68■□□□□ 0.1
LINC00661-204ENST00000549354 MAST1Q9Y2H9 1570 aa15.68■□□□□ 0.1
LINC00661-204ENST00000549354 ARAP3Q8WWN8 1544 aa15.68■□□□□ 0.1
LINC00661-204ENST00000549354 C9orf84Q5VXU9 1444 aa15.67■□□□□ 0.1
LINC00661-204ENST00000549354 PLCH2O75038 1416 aa15.67■□□□□ 0.1
LINC00661-204ENST00000549354 PLEKHH2Q8IVE3 1493 aa15.67■□□□□ 0.1
LINC00661-204ENST00000549354 ZNF777Q9ULD5 760 aaPredicted RBP15.67■□□□□ 0.1
LINC00661-204ENST00000549354 CCDC141Q6ZP82 1450 aa15.66■□□□□ 0.1
LINC00661-204ENST00000549354 MPHOSPH9Q99550 1183 aa15.65■□□□□ 0.1
LINC00661-204ENST00000549354 ARHGAP5Q13017 1502 aa15.64■□□□□ 0.09
LINC00661-204ENST00000549354 PPP1R15AO75807 674 aaPredicted RBP15.63■□□□□ 0.09
LINC00661-204ENST00000549354 PZPP20742 1482 aa15.63■□□□□ 0.09
LINC00661-204ENST00000549354 WDR7Q9Y4E6 1490 aa15.63■□□□□ 0.09
LINC00661-204ENST00000549354 KDM5DQ9BY66 1539 aa15.62■□□□□ 0.09
LINC00661-204ENST00000549354 ANKRD50Q9ULJ7 1429 aa15.61■□□□□ 0.09
LINC00661-204ENST00000549354 SYCP2Q9BX26 1530 aa15.61■□□□□ 0.09
LINC00661-204ENST00000549354 HNRNPMP52272 730 aaKnown RBP eCLIP15.61■□□□□ 0.09
LINC00661-204ENST00000549354 TSPY4P0CV99 314 aa15.6■□□□□ 0.09
LINC00661-204ENST00000549354 TSPY10P0CW01 314 aa15.6■□□□□ 0.09
LINC00661-204ENST00000549354 ANKRD30BQ9BXX2 1392 aa15.6■□□□□ 0.09
LINC00661-204ENST00000549354 ABCA9Q8IUA7 1624 aa15.6■□□□□ 0.09
LINC00661-204ENST00000549354 PLXNC1O60486 1568 aa15.59■□□□□ 0.09
LINC00661-204ENST00000549354 FOXD1Q16676 465 aa15.59■□□□□ 0.09
LINC00661-204ENST00000549354 ABCC1P33527 1531 aa15.58■□□□□ 0.09
LINC00661-204ENST00000549354 ARHGEF12Q9NZN5 1544 aa15.58■□□□□ 0.09
LINC00661-204ENST00000549354 TONSLQ96HA7 1378 aa15.57■□□□□ 0.08
LINC00661-204ENST00000549354 NEFLP07196 543 aa15.56■□□□□ 0.08
LINC00661-204ENST00000549354 ZNF326Q5BKZ1 582 aaKnown RBP15.56■□□□□ 0.08
LINC00661-204ENST00000549354 KIF15Q9NS87 1388 aa15.56■□□□□ 0.08
LINC00661-204ENST00000549354 EFCAB2Q5VUJ9 269 aa15.56■□□□□ 0.08
LINC00661-204ENST00000549354 RPRD2Q5VT52 1461 aaKnown RBP15.55■□□□□ 0.08
LINC00661-204ENST00000549354 ASXL2Q76L83 1435 aa15.55■□□□□ 0.08
LINC00661-204ENST00000549354 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.08
LINC00661-204ENST00000549354 ANP32CO43423 234 aa15.52■□□□□ 0.07
LINC00661-204ENST00000549354 UNC13BO14795 1591 aa15.51■□□□□ 0.07
LINC00661-204ENST00000549354 HNRNPUQ00839 825 aaKnown RBP eCLIP15.51■□□□□ 0.07
LINC00661-204ENST00000549354 ANP32EQ9BTT0 268 aa15.51■□□□□ 0.07
LINC00661-204ENST00000549354 RTEL1-TNFRSF6BF6WH68 1400 aa15.51■□□□□ 0.07
LINC00661-204ENST00000549354 DUOX2Q9NRD8 1548 aa15.5■□□□□ 0.07
LINC00661-204ENST00000549354 TEX14Q8IWB6 1497 aa15.49■□□□□ 0.07
LINC00661-204ENST00000549354 FAM9BQ8IZU0 186 aa15.48■□□□□ 0.07
LINC00661-204ENST00000549354 TRAPPC8Q9Y2L5 1435 aa15.48■□□□□ 0.07
LINC00661-204ENST00000549354 ERBINQ96RT1 1412 aa15.48■□□□□ 0.07
LINC00661-204ENST00000549354 MAGI2Q86UL8 1455 aa15.48■□□□□ 0.07
LINC00661-204ENST00000549354 NUP155O75694 1391 aa15.47■□□□□ 0.07
LINC00661-204ENST00000549354 FANCAO15360 1455 aa15.47■□□□□ 0.07
LINC00661-204ENST00000549354 ZFYVE16Q7Z3T8 1539 aa15.45■□□□□ 0.06
LINC00661-204ENST00000549354 FAM135AQ9P2D6 1515 aa15.45■□□□□ 0.06
LINC00661-204ENST00000549354 IQGAP3Q86VI3 1631 aa15.44■□□□□ 0.06
LINC00661-204ENST00000549354 PKD2Q13563 968 aa15.44■□□□□ 0.06
LINC00661-204ENST00000549354 INO80Q9ULG1 1556 aaPredicted RBP15.44■□□□□ 0.06
LINC00661-204ENST00000549354 NPM1P06748 294 aaKnown RBP eCLIP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms