RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 KDM5BQ9UGL1 1544 aa16.89■□□□□ 0.29
SLC38A1-206ENST00000549049 CFDP1Q9UEE9 299 aaPredicted RBP16.89■□□□□ 0.29
SLC38A1-206ENST00000549049 EHBP1L1Q8N3D4 1523 aa16.88■□□□□ 0.29
SLC38A1-206ENST00000549049 LRRIQ1Q96JM4 1722 aa16.87■□□□□ 0.29
SLC38A1-206ENST00000549049 PKD2Q13563 968 aa16.87■□□□□ 0.29
SLC38A1-206ENST00000549049 UGGT2Q9NYU1 1516 aa16.86■□□□□ 0.29
SLC38A1-206ENST00000549049 EPRSP07814 1512 aaKnown RBP16.86■□□□□ 0.29
SLC38A1-206ENST00000549049 NBR1Q14596 966 aa16.85■□□□□ 0.29
SLC38A1-206ENST00000549049 TMC1Q8TDI8 760 aa16.83■□□□□ 0.28
SLC38A1-206ENST00000549049 ANKRD30BQ9BXX2 1392 aa16.83■□□□□ 0.28
SLC38A1-206ENST00000549049 CCDC136Q96JN2 1154 aa16.82■□□□□ 0.28
SLC38A1-206ENST00000549049 AKNAQ7Z591 1439 aa16.82■□□□□ 0.28
SLC38A1-206ENST00000549049 ZBED9Q6R2W3 1325 aa16.82■□□□□ 0.28
SLC38A1-206ENST00000549049 THOC2Q8NI27 1593 aaKnown RBP16.81■□□□□ 0.28
SLC38A1-206ENST00000549049 SAMD9Q5K651 1589 aa16.81■□□□□ 0.28
SLC38A1-206ENST00000549049 NCOA1Q15788 1441 aa16.8■□□□□ 0.28
SLC38A1-206ENST00000549049 CARD11Q9BXL7 1154 aa16.79■□□□□ 0.28
SLC38A1-206ENST00000549049 ABCC5O15440 1437 aa16.78■□□□□ 0.28
SLC38A1-206ENST00000549049 FANCIQ9NVI1 1328 aa16.78■□□□□ 0.28
SLC38A1-206ENST00000549049 DAPK1P53355 1430 aa16.78■□□□□ 0.28
SLC38A1-206ENST00000549049 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.28
SLC38A1-206ENST00000549049 RGL3Q3MIN7 710 aa16.77■□□□□ 0.28
SLC38A1-206ENST00000549049 PRG4Q92954 1404 aaPredicted RBP16.77■□□□□ 0.27
SLC38A1-206ENST00000549049 CHMP7Q8WUX9 453 aaPredicted RBP16.76■□□□□ 0.27
SLC38A1-206ENST00000549049 NPM2Q86SE8 214 aaKnown RBP16.76■□□□□ 0.27
SLC38A1-206ENST00000549049 DCAF11Q8TEB1 546 aa16.75■□□□□ 0.27
SLC38A1-206ENST00000549049 USP47Q96K76 1375 aa16.75■□□□□ 0.27
SLC38A1-206ENST00000549049 ABCA5Q8WWZ7 1642 aa16.75■□□□□ 0.27
SLC38A1-206ENST00000549049 ST20-MTHFSA0A0A6YYL1 179 aa16.74■□□□□ 0.27
SLC38A1-206ENST00000549049 PAK3O75914 559 aaPredicted RBP16.73■□□□□ 0.27
SLC38A1-206ENST00000549049 TCOF1Q13428 1488 aaKnown RBP16.73■□□□□ 0.27
SLC38A1-206ENST00000549049 MIA2Q96PC5 1412 aa16.73■□□□□ 0.27
SLC38A1-206ENST00000549049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.27
SLC38A1-206ENST00000549049 RPRD2Q5VT52 1461 aaKnown RBP16.72■□□□□ 0.27
SLC38A1-206ENST00000549049 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
SLC38A1-206ENST00000549049 NUDCQ9Y266 331 aa16.72■□□□□ 0.27
SLC38A1-206ENST00000549049 HECW1Q76N89 1606 aa16.72■□□□□ 0.27
SLC38A1-206ENST00000549049 IQGAP2Q13576 1575 aa16.71■□□□□ 0.27
SLC38A1-206ENST00000549049 NUP155O75694 1391 aa16.7■□□□□ 0.26
SLC38A1-206ENST00000549049 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
SLC38A1-206ENST00000549049 HNRNPMP52272 730 aaKnown RBP eCLIP16.7■□□□□ 0.266e-7■■■■□ 23.4
SLC38A1-206ENST00000549049 ERICH6BQ5W0A0 696 aa16.69■□□□□ 0.26
SLC38A1-206ENST00000549049 TSPY4P0CV99 314 aa16.67■□□□□ 0.26
SLC38A1-206ENST00000549049 TSPY10P0CW01 314 aa16.67■□□□□ 0.26
SLC38A1-206ENST00000549049 TEX14Q8IWB6 1497 aa16.67■□□□□ 0.26
SLC38A1-206ENST00000549049 PLEKHD1A6NEE1 506 aa16.66■□□□□ 0.26
SLC38A1-206ENST00000549049 NOP58Q9Y2X3 529 aaKnown RBP16.66■□□□□ 0.26
SLC38A1-206ENST00000549049 KIF21AQ7Z4S6 1674 aa16.66■□□□□ 0.26
SLC38A1-206ENST00000549049 PNISRQ8TF01 805 aaKnown RBP16.66■□□□□ 0.26
SLC38A1-206ENST00000549049 SPATA31E1Q6ZUB1 1445 aa16.65■□□□□ 0.26
SLC38A1-206ENST00000549049 CC2D1BQ5T0F9 858 aaKnown RBP16.65■□□□□ 0.26
SLC38A1-206ENST00000549049 DHX29Q7Z478 1369 aaKnown RBP16.64■□□□□ 0.25
SLC38A1-206ENST00000549049 PLB1Q6P1J6 1458 aa16.64■□□□□ 0.25
SLC38A1-206ENST00000549049 DEKP35659 375 aaKnown RBP16.64■□□□□ 0.25
SLC38A1-206ENST00000549049 WDR62O43379 1518 aa16.64■□□□□ 0.25
SLC38A1-206ENST00000549049 NUP153P49790 1475 aaKnown RBP16.63■□□□□ 0.25
SLC38A1-206ENST00000549049 EXOC6Q8TAG9 804 aa16.63■□□□□ 0.25
SLC38A1-206ENST00000549049 GCC2Q8IWJ2 1684 aa16.63■□□□□ 0.25
SLC38A1-206ENST00000549049 ROCK1Q13464 1354 aa16.63■□□□□ 0.25
SLC38A1-206ENST00000549049 ANP32AP39687 249 aaKnown RBP16.63■□□□□ 0.25
SLC38A1-206ENST00000549049 SKAP1Q86WV1 359 aa16.63■□□□□ 0.25
SLC38A1-206ENST00000549049 PLIN1O60240 522 aa16.61■□□□□ 0.25
SLC38A1-206ENST00000549049 JPH4Q96JJ6 628 aa16.61■□□□□ 0.25
SLC38A1-206ENST00000549049 PZPP20742 1482 aa16.61■□□□□ 0.25
SLC38A1-206ENST00000549049 TARBP1Q13395 1621 aaKnown RBP16.6■□□□□ 0.25
SLC38A1-206ENST00000549049 CDCA7LQ96GN5 454 aa16.6■□□□□ 0.25
SLC38A1-206ENST00000549049 ANKRD30AQ9BXX3 1397 aa16.6■□□□□ 0.25
SLC38A1-206ENST00000549049 NBPF1Q3BBV0 1214 aa16.6■□□□□ 0.25
SLC38A1-206ENST00000549049 KIAA1107Q9UPP5 1409 aa16.59■□□□□ 0.25
SLC38A1-206ENST00000549049 ANKRD50Q9ULJ7 1429 aa16.59■□□□□ 0.25
SLC38A1-206ENST00000549049 CAMSAP2Q08AD1 1489 aa16.58■□□□□ 0.24
SLC38A1-206ENST00000549049 ZBTB47Q9UFB7 747 aaPredicted RBP16.58■□□□□ 0.24
SLC38A1-206ENST00000549049 SMG6Q86US8 1419 aaKnown RBP16.57■□□□□ 0.24
SLC38A1-206ENST00000549049 DISP1Q96F81 1524 aa16.57■□□□□ 0.24
SLC38A1-206ENST00000549049 ROCK2O75116 1388 aaKnown RBP16.56■□□□□ 0.24
SLC38A1-206ENST00000549049 TROQ12816 1431 aaPredicted RBP16.56■□□□□ 0.24
SLC38A1-206ENST00000549049 LAS1LQ9Y4W2 734 aaKnown RBP16.55■□□□□ 0.24
SLC38A1-206ENST00000549049 RCAN3Q9UKA8 241 aa16.54■□□□□ 0.24
SLC38A1-206ENST00000549049 ADAMTS12P58397 1594 aa16.54■□□□□ 0.24
SLC38A1-206ENST00000549049 GPATCH8Q9UKJ3 1502 aaKnown RBP16.54■□□□□ 0.24
SLC38A1-206ENST00000549049 KIAA0586Q9BVV6 1533 aa16.54■□□□□ 0.24
SLC38A1-206ENST00000549049 RRP1P56182 461 aaKnown RBP16.52■□□□□ 0.24
SLC38A1-206ENST00000549049 RTL5Q5HYW3 569 aaPredicted RBP16.52■□□□□ 0.24
SLC38A1-206ENST00000549049 DNMT1P26358 1616 aaKnown RBP16.52■□□□□ 0.24
SLC38A1-206ENST00000549049 PBRM1Q86U86 1689 aa16.52■□□□□ 0.23
SLC38A1-206ENST00000549049 MYBBP1AQ9BQG0 1328 aaKnown RBP16.52■□□□□ 0.23
SLC38A1-206ENST00000549049 BCORL1Q5H9F3 1711 aa16.51■□□□□ 0.23
SLC38A1-206ENST00000549049 KIF15Q9NS87 1388 aa16.51■□□□□ 0.23
SLC38A1-206ENST00000549049 MRC2Q9UBG0 1479 aa16.51■□□□□ 0.23
SLC38A1-206ENST00000549049 IPO9Q96P70 1041 aaKnown RBP16.51■□□□□ 0.23
SLC38A1-206ENST00000549049 KIAA0556O60303 1618 aa16.48■□□□□ 0.23
SLC38A1-206ENST00000549049 PANK3Q9H999 370 aa16.48■□□□□ 0.23
SLC38A1-206ENST00000549049 RALBP1Q15311 655 aa16.47■□□□□ 0.23
SLC38A1-206ENST00000549049 KIF14Q15058 1648 aa16.47■□□□□ 0.23
SLC38A1-206ENST00000549049 GRIN2AQ12879 1464 aa16.47■□□□□ 0.23
SLC38A1-206ENST00000549049 C9orf84Q5VXU9 1444 aa16.47■□□□□ 0.23
SLC38A1-206ENST00000549049 RAPGEF6Q8TEU7 1601 aa16.47■□□□□ 0.23
SLC38A1-206ENST00000549049 NLRP13Q86W25 1043 aa16.46■□□□□ 0.23
SLC38A1-206ENST00000549049 KTN1Q86UP2 1357 aaKnown RBP16.44■□□□□ 0.22
SLC38A1-206ENST00000549049 ERCC6Q03468 1493 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms