RNA–Protein interactions for RNA: ENST00000549040.5

RFX4-208, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-208ENST00000549040 CLASP1Q7Z460 1538 aa13.11□□□□□ -0.31
RFX4-208ENST00000549040 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
RFX4-208ENST00000549040 RANGAP1P46060 587 aaPredicted RBP13.08□□□□□ -0.32
RFX4-208ENST00000549040 DCAF8Q5TAQ9 597 aa13.07□□□□□ -0.32
RFX4-208ENST00000549040 SPOCK2Q92563 424 aa13.06□□□□□ -0.32
RFX4-208ENST00000549040 IQGAP2Q13576 1575 aa13.06□□□□□ -0.32
RFX4-208ENST00000549040 UGGT2Q9NYU1 1516 aa13.04□□□□□ -0.32
RFX4-208ENST00000549040 PRG4Q92954 1404 aaPredicted RBP13.04□□□□□ -0.32
RFX4-208ENST00000549040 GALR2O43603 387 aaPredicted RBP13.03□□□□□ -0.32
RFX4-208ENST00000549040 P3H3Q8IVL6 736 aa13.03□□□□□ -0.32
RFX4-208ENST00000549040 KIF12Q96FN5 646 aa13.03□□□□□ -0.32
RFX4-208ENST00000549040 DISP1Q96F81 1524 aa13.03□□□□□ -0.32
RFX4-208ENST00000549040 SHROOM2Q13796 1616 aa13.02□□□□□ -0.32
RFX4-208ENST00000549040 CEP162Q5TB80 1403 aa13.02□□□□□ -0.33
RFX4-208ENST00000549040 CTTNBP2Q8WZ74 1663 aa13.02□□□□□ -0.33
RFX4-208ENST00000549040 CLIP1P30622 1438 aa13.01□□□□□ -0.33
RFX4-208ENST00000549040 ARHGAP35Q9NRY4 1499 aa13.01□□□□□ -0.33
RFX4-208ENST00000549040 ERCC6L2Q5T890 1561 aa13□□□□□ -0.33
RFX4-208ENST00000549040 GSE1Q14687 1217 aa12.99□□□□□ -0.33
RFX4-208ENST00000549040 MAP3K13O43283 966 aa12.97□□□□□ -0.33
RFX4-208ENST00000549040 MS4A3Q96HJ5 214 aa12.97□□□□□ -0.33
RFX4-208ENST00000549040 SAMD9Q5K651 1589 aa12.96□□□□□ -0.33
RFX4-208ENST00000549040 DCBLD2Q96PD2 775 aa12.96□□□□□ -0.33
RFX4-208ENST00000549040 ARAP1Q96P48 1450 aa12.96□□□□□ -0.34
RFX4-208ENST00000549040 CARMIL2Q6F5E8 1435 aa12.96□□□□□ -0.34
RFX4-208ENST00000549040 FHOD3Q2V2M9 1422 aa12.95□□□□□ -0.34
RFX4-208ENST00000549040 KIAA0556O60303 1618 aa12.93□□□□□ -0.34
RFX4-208ENST00000549040 POTEIP0CG38 1075 aa12.93□□□□□ -0.34
RFX4-208ENST00000549040 SGIP1Q9BQI5 828 aa12.93□□□□□ -0.34
RFX4-208ENST00000549040 EFCAB5A4FU69 1503 aa12.93□□□□□ -0.34
RFX4-208ENST00000549040 ARHGEF11O15085 1522 aa12.93□□□□□ -0.34
RFX4-208ENST00000549040 PTPRGP23470 1445 aa12.92□□□□□ -0.34
RFX4-208ENST00000549040 TTBK1Q5TCY1 1321 aaPredicted RBP12.9□□□□□ -0.34
RFX4-208ENST00000549040 PYGBP11216 843 aa12.9□□□□□ -0.34
RFX4-208ENST00000549040 CIZ1Q9ULV3 898 aaPredicted RBP12.9□□□□□ -0.34
RFX4-208ENST00000549040 PCDHB13Q9Y5F0 798 aa12.89□□□□□ -0.35
RFX4-208ENST00000549040 RIMBP3CA6NJZ7 1639 aa12.87□□□□□ -0.35
RFX4-208ENST00000549040 RIMBP3BA6NNM3 1639 aa12.87□□□□□ -0.35
RFX4-208ENST00000549040 RIMBP3Q9UFD9 1639 aa12.87□□□□□ -0.35
RFX4-208ENST00000549040 CYB5RLQ6IPT4 315 aa12.86□□□□□ -0.35
RFX4-208ENST00000549040 PLB1Q6P1J6 1458 aa12.85□□□□□ -0.35
RFX4-208ENST00000549040 CHRM1P11229 460 aaPredicted RBP12.85□□□□□ -0.35
RFX4-208ENST00000549040 FMN1Q68DA7 1419 aa12.85□□□□□ -0.35
RFX4-208ENST00000549040 VPS8Q8N3P4 1428 aa12.84□□□□□ -0.35
RFX4-208ENST00000549040 IFNL1Q8IU54 200 aa12.83□□□□□ -0.36
RFX4-208ENST00000549040 UACAQ9BZF9 1416 aa12.82□□□□□ -0.36
RFX4-208ENST00000549040 ABCA8O94911 1581 aa12.81□□□□□ -0.36
RFX4-208ENST00000549040 CASKIN1Q8WXD9 1431 aa12.81□□□□□ -0.36
RFX4-208ENST00000549040 TRPC6Q9Y210 931 aa12.81□□□□□ -0.36
RFX4-208ENST00000549040 ASTLQ6HA08 431 aaPredicted RBP12.8□□□□□ -0.36
RFX4-208ENST00000549040 UHRF1BP1LA0JNW5 1464 aa12.79□□□□□ -0.36
RFX4-208ENST00000549040 ATMINO43313 823 aaPredicted RBP12.79□□□□□ -0.36
RFX4-208ENST00000549040 TIE1P35590 1138 aa12.79□□□□□ -0.36
RFX4-208ENST00000549040 NUP153P49790 1475 aaKnown RBP12.78□□□□□ -0.36
RFX4-208ENST00000549040 ARID3CA6NKF2 412 aa12.78□□□□□ -0.36
RFX4-208ENST00000549040 ATP1B4Q9UN42 357 aaPredicted RBP12.78□□□□□ -0.36
RFX4-208ENST00000549040 ATP10BO94823 1461 aa12.77□□□□□ -0.37
RFX4-208ENST00000549040 BMP2KQ9NSY1 1161 aaPredicted RBP12.76□□□□□ -0.37
RFX4-208ENST00000549040 PCDHB8Q9UN66 801 aa12.76□□□□□ -0.37
RFX4-208ENST00000549040 ABCC2Q92887 1545 aa12.76□□□□□ -0.37
RFX4-208ENST00000549040 RAPGEF6Q8TEU7 1601 aa12.76□□□□□ -0.37
RFX4-208ENST00000549040 PCF11O94913 1555 aaKnown RBP12.75□□□□□ -0.37
RFX4-208ENST00000549040 ZNF467Q7Z7K2 595 aaPredicted RBP12.75□□□□□ -0.37
RFX4-208ENST00000549040 PELP1Q8IZL8 1130 aaKnown RBP12.75□□□□□ -0.37
RFX4-208ENST00000549040 FYCO1Q9BQS8 1478 aa12.75□□□□□ -0.37
RFX4-208ENST00000549040 ADCY10Q96PN6 1610 aa12.74□□□□□ -0.37
RFX4-208ENST00000549040 EPRSP07814 1512 aaKnown RBP12.73□□□□□ -0.37
RFX4-208ENST00000549040 KDM5BQ9UGL1 1544 aa12.73□□□□□ -0.37
RFX4-208ENST00000549040 ATN1P54259 1190 aaPredicted RBP12.73□□□□□ -0.37
RFX4-208ENST00000549040 KANK4Q5T7N3 995 aaPredicted RBP12.73□□□□□ -0.37
RFX4-208ENST00000549040 TTLL13PA6NNM8 815 aa12.72□□□□□ -0.37
RFX4-208ENST00000549040 CDK13Q14004 1512 aaKnown RBP12.71□□□□□ -0.38
RFX4-208ENST00000549040 LRRIQ1Q96JM4 1722 aa12.69□□□□□ -0.38
RFX4-208ENST00000549040 HECW1Q76N89 1606 aa12.69□□□□□ -0.38
RFX4-208ENST00000549040 MAP3K1Q13233 1512 aa12.68□□□□□ -0.38
RFX4-208ENST00000549040 PPARGC1BQ86YN6 1023 aaKnown RBP12.68□□□□□ -0.38
RFX4-208ENST00000549040 TMEM106CQ9BVX2 250 aa12.68□□□□□ -0.38
RFX4-208ENST00000549040 PLEKHD1A6NEE1 506 aa12.67□□□□□ -0.38
RFX4-208ENST00000549040 SLC39A7Q92504 469 aa12.67□□□□□ -0.38
RFX4-208ENST00000549040 MAGI3Q5TCQ9 1506 aa12.67□□□□□ -0.38
RFX4-208ENST00000549040 CCDC18Q5T9S5 1454 aa12.66□□□□□ -0.38
RFX4-208ENST00000549040 C7P10643 843 aa12.66□□□□□ -0.38
RFX4-208ENST00000549040 TIAM1Q13009 1591 aa12.64□□□□□ -0.39
RFX4-208ENST00000549040 ZCCHC11Q5TAX3 1644 aaKnown RBP12.64□□□□□ -0.39
RFX4-208ENST00000549040 LHX8Q68G74 356 aa12.64□□□□□ -0.39
RFX4-208ENST00000549040 TRIM35Q9UPQ4 493 aa12.64□□□□□ -0.39
RFX4-208ENST00000549040 LRRC9Q6ZRR7 1453 aa12.64□□□□□ -0.39
RFX4-208ENST00000549040 ASXL2Q76L83 1435 aa12.63□□□□□ -0.39
RFX4-208ENST00000549040 CDK11AQ9UQ88 783 aaPredicted RBP12.63□□□□□ -0.39
RFX4-208ENST00000549040 KCNH8Q96L42 1107 aa12.62□□□□□ -0.39
RFX4-208ENST00000549040 METRNQ9UJH8 293 aa12.62□□□□□ -0.39
RFX4-208ENST00000549040 TROQ12816 1431 aaPredicted RBP12.62□□□□□ -0.39
RFX4-208ENST00000549040 PSEN1P49768 467 aa12.61□□□□□ -0.39
RFX4-208ENST00000549040 PDAP1Q13442 181 aaKnown RBP12.61□□□□□ -0.39
RFX4-208ENST00000549040 MTUS2Q5JR59 1369 aa12.6□□□□□ -0.39
RFX4-208ENST00000549040 PKD2Q13563 968 aa12.6□□□□□ -0.39
RFX4-208ENST00000549040 MAPKBP1O60336 1514 aa12.59□□□□□ -0.39
RFX4-208ENST00000549040 WDR7Q9Y4E6 1490 aa12.59□□□□□ -0.39
RFX4-208ENST00000549040 CFAP43Q8NDM7 1665 aa12.58□□□□□ -0.4
RFX4-208ENST00000549040 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms