RNA–Protein interactions for RNA: ENST00000548493.5

PMEL-204, Transcript of premelanosome protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene PMEL, Length 2,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-204ENST00000548493 CNTLNQ9NXG0 1405 aa17.24■□□□□ 0.35
PMEL-204ENST00000548493 ARID3CA6NKF2 412 aa17.24■□□□□ 0.35
PMEL-204ENST00000548493 DISP1Q96F81 1524 aa17.23■□□□□ 0.35
PMEL-204ENST00000548493 KIAA0586Q9BVV6 1533 aa17.23■□□□□ 0.35
PMEL-204ENST00000548493 RPRD2Q5VT52 1461 aaKnown RBP17.23■□□□□ 0.35
PMEL-204ENST00000548493 ABCC5O15440 1437 aa17.23■□□□□ 0.35
PMEL-204ENST00000548493 ANKRD30BQ9BXX2 1392 aa17.23■□□□□ 0.35
PMEL-204ENST00000548493 HNRNPUQ00839 825 aaKnown RBP eCLIP17.23■□□□□ 0.35
PMEL-204ENST00000548493 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
PMEL-204ENST00000548493 NCOA1Q15788 1441 aa17.22■□□□□ 0.35
PMEL-204ENST00000548493 FOXD1Q16676 465 aa17.21■□□□□ 0.35
PMEL-204ENST00000548493 NUP153P49790 1475 aaKnown RBP17.21■□□□□ 0.35
PMEL-204ENST00000548493 ZNF608Q9ULD9 1512 aaPredicted RBP17.2■□□□□ 0.34
PMEL-204ENST00000548493 TEX14Q8IWB6 1497 aa17.2■□□□□ 0.34
PMEL-204ENST00000548493 RAPGEF6Q8TEU7 1601 aa17.2■□□□□ 0.34
PMEL-204ENST00000548493 CCDC7Q96M83 1385 aa17.19■□□□□ 0.34
PMEL-204ENST00000548493 C11orf95C9JLR9 678 aaPredicted RBP17.17■□□□□ 0.34
PMEL-204ENST00000548493 ZNF644Q9H582 1327 aaPredicted RBP17.17■□□□□ 0.34
PMEL-204ENST00000548493 NBPF8Q3BBV2 869 aa17.16■□□□□ 0.34
PMEL-204ENST00000548493 CDK11AQ9UQ88 783 aaPredicted RBP17.16■□□□□ 0.34
PMEL-204ENST00000548493 RBM19Q9Y4C8 960 aaKnown RBP17.15■□□□□ 0.34
PMEL-204ENST00000548493 GRIN2AQ12879 1464 aa17.14■□□□□ 0.33
PMEL-204ENST00000548493 SPATA31E1Q6ZUB1 1445 aa17.14■□□□□ 0.33
PMEL-204ENST00000548493 POLR1AO95602 1720 aaPredicted RBP17.14■□□□□ 0.33
PMEL-204ENST00000548493 SLC4A1APQ9BWU0 796 aaKnown RBP17.13■□□□□ 0.33
PMEL-204ENST00000548493 PRKRIP1Q9H875 184 aaPredicted RBP17.13■□□□□ 0.33
PMEL-204ENST00000548493 CCDC184Q52MB2 194 aa17.12■□□□□ 0.33
PMEL-204ENST00000548493 TROQ12816 1431 aaPredicted RBP17.12■□□□□ 0.33
PMEL-204ENST00000548493 DAXXQ9UER7 740 aaPredicted RBP17.12■□□□□ 0.33
PMEL-204ENST00000548493 PZPP20742 1482 aa17.11■□□□□ 0.33
PMEL-204ENST00000548493 CAMSAP2Q08AD1 1489 aa17.1■□□□□ 0.33
PMEL-204ENST00000548493 EIF4G3O43432 1585 aaKnown RBP17.1■□□□□ 0.33
PMEL-204ENST00000548493 ITSN2Q9NZM3 1697 aa17.1■□□□□ 0.33
PMEL-204ENST00000548493 ADGBQ8N7X0 1667 aa17.1■□□□□ 0.33
PMEL-204ENST00000548493 PRG4Q92954 1404 aaPredicted RBP17.09■□□□□ 0.33
PMEL-204ENST00000548493 KIF7Q2M1P5 1343 aa17.08■□□□□ 0.33
PMEL-204ENST00000548493 ERICH6BQ5W0A0 696 aa17.08■□□□□ 0.32
PMEL-204ENST00000548493 ADCY10Q96PN6 1610 aa17.07■□□□□ 0.32
PMEL-204ENST00000548493 GPATCH8Q9UKJ3 1502 aaKnown RBP17.07■□□□□ 0.32
PMEL-204ENST00000548493 ADGRL2O95490 1459 aa17.07■□□□□ 0.32
PMEL-204ENST00000548493 MBD5Q9P267 1494 aa17.06■□□□□ 0.32
PMEL-204ENST00000548493 CFDP1Q9UEE9 299 aaPredicted RBP17.06■□□□□ 0.32
PMEL-204ENST00000548493 CROCC2H7BZ55 1655 aa17.06■□□□□ 0.32
PMEL-204ENST00000548493 MRS2Q9HD23 443 aa17.05■□□□□ 0.32
PMEL-204ENST00000548493 KIAA1107Q9UPP5 1409 aa17.04■□□□□ 0.32
PMEL-204ENST00000548493 IRX6P78412 446 aaPredicted RBP17.04■□□□□ 0.32
PMEL-204ENST00000548493 KIF14Q15058 1648 aa17.04■□□□□ 0.32
PMEL-204ENST00000548493 PLB1Q6P1J6 1458 aa17.04■□□□□ 0.32
PMEL-204ENST00000548493 MAGI1Q96QZ7 1491 aaPredicted RBP17.04■□□□□ 0.32
PMEL-204ENST00000548493 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
PMEL-204ENST00000548493 FAM9BQ8IZU0 186 aa17.03■□□□□ 0.32
PMEL-204ENST00000548493 CEP170Q5SW79 1584 aa17.03■□□□□ 0.32
PMEL-204ENST00000548493 SYNJ2O15056 1496 aa17■□□□□ 0.31
PMEL-204ENST00000548493 ANKRD30AQ9BXX3 1397 aa17■□□□□ 0.31
PMEL-204ENST00000548493 PPP4R2Q9NY27 417 aa16.99■□□□□ 0.31
PMEL-204ENST00000548493 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
PMEL-204ENST00000548493 ZNF777Q9ULD5 760 aaPredicted RBP16.97■□□□□ 0.31
PMEL-204ENST00000548493 DHX29Q7Z478 1369 aaKnown RBP16.97■□□□□ 0.31
PMEL-204ENST00000548493 BCORL1Q5H9F3 1711 aa16.97■□□□□ 0.31
PMEL-204ENST00000548493 CARMIL2Q6F5E8 1435 aa16.97■□□□□ 0.31
PMEL-204ENST00000548493 PKD2Q13563 968 aa16.97■□□□□ 0.31
PMEL-204ENST00000548493 USP47Q96K76 1375 aa16.97■□□□□ 0.31
PMEL-204ENST00000548493 ANKRD50Q9ULJ7 1429 aa16.96■□□□□ 0.31
PMEL-204ENST00000548493 KDM5CP41229 1560 aa16.96■□□□□ 0.3
PMEL-204ENST00000548493 NUP160Q12769 1436 aa16.95■□□□□ 0.3
PMEL-204ENST00000548493 ARID4BQ4LE39 1312 aaPredicted RBP16.94■□□□□ 0.3
PMEL-204ENST00000548493 CDC42BPAQ5VT25 1732 aa16.94■□□□□ 0.3
PMEL-204ENST00000548493 SHANK2Q9UPX8 1470 aa16.94■□□□□ 0.3
PMEL-204ENST00000548493 UHRF1BP1Q6BDS2 1440 aa16.94■□□□□ 0.3
PMEL-204ENST00000548493 FANCIQ9NVI1 1328 aa16.93■□□□□ 0.3
PMEL-204ENST00000548493 JPH4Q96JJ6 628 aa16.93■□□□□ 0.3
PMEL-204ENST00000548493 ABCC10Q5T3U5 1492 aa16.92■□□□□ 0.3
PMEL-204ENST00000548493 ABCA8O94911 1581 aa16.92■□□□□ 0.3
PMEL-204ENST00000548493 RALGAPBQ86X10 1494 aa16.91■□□□□ 0.3
PMEL-204ENST00000548493 C9orf84Q5VXU9 1444 aa16.9■□□□□ 0.3
PMEL-204ENST00000548493 KDM5DQ9BY66 1539 aa16.9■□□□□ 0.3
PMEL-204ENST00000548493 ZNF326Q5BKZ1 582 aaKnown RBP16.9■□□□□ 0.3
PMEL-204ENST00000548493 ARHGEF12Q9NZN5 1544 aa16.9■□□□□ 0.3
PMEL-204ENST00000548493 PLEKHD1A6NEE1 506 aa16.89■□□□□ 0.29
PMEL-204ENST00000548493 MSH5O43196 834 aa16.89■□□□□ 0.29
PMEL-204ENST00000548493 ERCC6Q03468 1493 aa16.89■□□□□ 0.29
PMEL-204ENST00000548493 SMG6Q86US8 1419 aaKnown RBP16.89■□□□□ 0.29
PMEL-204ENST00000548493 NUP155O75694 1391 aa16.89■□□□□ 0.29
PMEL-204ENST00000548493 ATP10BO94823 1461 aa16.88■□□□□ 0.29
PMEL-204ENST00000548493 ROCK2O75116 1388 aaKnown RBP16.88■□□□□ 0.29
PMEL-204ENST00000548493 FBLN2P98095 1184 aa16.88■□□□□ 0.29
PMEL-204ENST00000548493 PTPRGP23470 1445 aa16.85■□□□□ 0.29
PMEL-204ENST00000548493 B4GALNT3Q6L9W6 998 aa16.85■□□□□ 0.29
PMEL-204ENST00000548493 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
PMEL-204ENST00000548493 ARHGEF5Q12774 1597 aa16.84■□□□□ 0.29
PMEL-204ENST00000548493 TSPY4P0CV99 314 aa16.84■□□□□ 0.29
PMEL-204ENST00000548493 TSPY10P0CW01 314 aa16.84■□□□□ 0.29
PMEL-204ENST00000548493 CARD11Q9BXL7 1154 aa16.83■□□□□ 0.28
PMEL-204ENST00000548493 NUDCQ9Y266 331 aa16.83■□□□□ 0.28
PMEL-204ENST00000548493 KIF15Q9NS87 1388 aa16.82■□□□□ 0.28
PMEL-204ENST00000548493 RNF123Q5XPI4 1314 aa16.81■□□□□ 0.28
PMEL-204ENST00000548493 PNISRQ8TF01 805 aaKnown RBP16.81■□□□□ 0.28
PMEL-204ENST00000548493 CNGB1Q14028 1251 aaPredicted RBP16.8■□□□□ 0.28
PMEL-204ENST00000548493 HNRNPMP52272 730 aaKnown RBP eCLIP16.78■□□□□ 0.28
PMEL-204ENST00000548493 ST20-MTHFSA0A0A6YYL1 179 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms