RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 CARMIL2Q6F5E8 1435 aa12.64□□□□□ -0.39
CALCOCO1-210ENST00000548263 SNAPC4Q5SXM2 1469 aa12.63□□□□□ -0.39
CALCOCO1-210ENST00000548263 CARD11Q9BXL7 1154 aa12.63□□□□□ -0.39
CALCOCO1-210ENST00000548263 GRIN2BQ13224 1484 aa12.63□□□□□ -0.39
CALCOCO1-210ENST00000548263 CCDC18Q5T9S5 1454 aa12.63□□□□□ -0.39
CALCOCO1-210ENST00000548263 FGD6Q6ZV73 1430 aa12.62□□□□□ -0.39
CALCOCO1-210ENST00000548263 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
CALCOCO1-210ENST00000548263 CASKIN1Q8WXD9 1431 aa12.61□□□□□ -0.39
CALCOCO1-210ENST00000548263 WASHC2AQ641Q2 1341 aa12.61□□□□□ -0.39
CALCOCO1-210ENST00000548263 EIF5BO60841 1220 aaKnown RBP12.6□□□□□ -0.39
CALCOCO1-210ENST00000548263 MSH5O43196 834 aa12.6□□□□□ -0.39
CALCOCO1-210ENST00000548263 DCAF11Q8TEB1 546 aa12.6□□□□□ -0.39
CALCOCO1-210ENST00000548263 NCOA2Q15596 1464 aa12.6□□□□□ -0.39
CALCOCO1-210ENST00000548263 PCF11O94913 1555 aaKnown RBP12.6□□□□□ -0.39
CALCOCO1-210ENST00000548263 CDK13Q14004 1512 aaKnown RBP12.59□□□□□ -0.39
CALCOCO1-210ENST00000548263 NEFMP07197 916 aa12.59□□□□□ -0.39
CALCOCO1-210ENST00000548263 CANXP27824 592 aaKnown RBP12.58□□□□□ -0.4
CALCOCO1-210ENST00000548263 CCDC184Q52MB2 194 aa12.58□□□□□ -0.4
CALCOCO1-210ENST00000548263 TIAM1Q13009 1591 aa12.58□□□□□ -0.4
CALCOCO1-210ENST00000548263 NUDCQ9Y266 331 aa12.58□□□□□ -0.4
CALCOCO1-210ENST00000548263 PTPRGP23470 1445 aa12.57□□□□□ -0.4
CALCOCO1-210ENST00000548263 ZBED9Q6R2W3 1325 aa12.57□□□□□ -0.4
CALCOCO1-210ENST00000548263 PRG4Q92954 1404 aaPredicted RBP12.56□□□□□ -0.4
CALCOCO1-210ENST00000548263 NUP155O75694 1391 aa12.56□□□□□ -0.4
CALCOCO1-210ENST00000548263 MYOM3Q5VTT5 1437 aa12.56□□□□□ -0.4
CALCOCO1-210ENST00000548263 UACAQ9BZF9 1416 aa12.55□□□□□ -0.4
CALCOCO1-210ENST00000548263 IPO9Q96P70 1041 aaKnown RBP12.55□□□□□ -0.4
CALCOCO1-210ENST00000548263 FYCO1Q9BQS8 1478 aa12.53□□□□□ -0.4
CALCOCO1-210ENST00000548263 IFT140Q96RY7 1462 aa12.53□□□□□ -0.4
CALCOCO1-210ENST00000548263 TARBP1Q13395 1621 aaKnown RBP12.53□□□□□ -0.4
CALCOCO1-210ENST00000548263 WDR43Q15061 677 aaKnown RBP eCLIP12.52□□□□□ -0.4
CALCOCO1-210ENST00000548263 PLB1Q6P1J6 1458 aa12.52□□□□□ -0.41
CALCOCO1-210ENST00000548263 PPM1GO15355 546 aaPredicted RBP12.51□□□□□ -0.41
CALCOCO1-210ENST00000548263 CC2D1BQ5T0F9 858 aaKnown RBP12.51□□□□□ -0.41
CALCOCO1-210ENST00000548263 GGT6Q6P531 493 aa12.51□□□□□ -0.41
CALCOCO1-210ENST00000548263 CCDC7Q96M83 1385 aa12.5□□□□□ -0.41
CALCOCO1-210ENST00000548263 MAPKBP1O60336 1514 aa12.5□□□□□ -0.41
CALCOCO1-210ENST00000548263 DDRGK1Q96HY6 314 aa12.5□□□□□ -0.41
CALCOCO1-210ENST00000548263 RCAN3Q9UKA8 241 aa12.5□□□□□ -0.41
CALCOCO1-210ENST00000548263 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.49□□□□□ -0.41
CALCOCO1-210ENST00000548263 KIF7Q2M1P5 1343 aa12.49□□□□□ -0.41
CALCOCO1-210ENST00000548263 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
CALCOCO1-210ENST00000548263 CYB5RLQ6IPT4 315 aa12.48□□□□□ -0.41
CALCOCO1-210ENST00000548263 CNTLNQ9NXG0 1405 aa12.48□□□□□ -0.41
CALCOCO1-210ENST00000548263 RGS3P49796 1198 aa12.47□□□□□ -0.41
CALCOCO1-210ENST00000548263 MLECQ14165 292 aa12.47□□□□□ -0.41
CALCOCO1-210ENST00000548263 ARXQ96QS3 562 aa12.47□□□□□ -0.41
CALCOCO1-210ENST00000548263 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
CALCOCO1-210ENST00000548263 NUTM2DQ5VT03 806 aaPredicted RBP12.46□□□□□ -0.41
CALCOCO1-210ENST00000548263 ANKRD30AQ9BXX3 1397 aa12.46□□□□□ -0.41
CALCOCO1-210ENST00000548263 EFCAB5A4FU69 1503 aa12.46□□□□□ -0.41
CALCOCO1-210ENST00000548263 TCERG1O14776 1098 aaKnown RBP12.46□□□□□ -0.42
CALCOCO1-210ENST00000548263 EPRSP07814 1512 aaKnown RBP12.46□□□□□ -0.42
CALCOCO1-210ENST00000548263 AFAP1Q8N556 730 aa12.45□□□□□ -0.42
CALCOCO1-210ENST00000548263 EXOC6Q8TAG9 804 aa12.45□□□□□ -0.42
CALCOCO1-210ENST00000548263 IQGAP2Q13576 1575 aa12.45□□□□□ -0.42
CALCOCO1-210ENST00000548263 C11orf95C9JLR9 678 aaPredicted RBP12.45□□□□□ -0.42
CALCOCO1-210ENST00000548263 KIF3BO15066 747 aa12.45□□□□□ -0.42
CALCOCO1-210ENST00000548263 NBPF8Q3BBV2 869 aa12.45□□□□□ -0.42
CALCOCO1-210ENST00000548263 EFCAB2Q5VUJ9 269 aa12.45□□□□□ -0.42
CALCOCO1-210ENST00000548263 PTPRKQ15262 1439 aa12.44□□□□□ -0.42
CALCOCO1-210ENST00000548263 PRKCSHP14314 528 aaPredicted RBP12.44□□□□□ -0.42
CALCOCO1-210ENST00000548263 GRIN2AQ12879 1464 aa12.43□□□□□ -0.42
CALCOCO1-210ENST00000548263 HFM1A2PYH4 1435 aa12.43□□□□□ -0.42
CALCOCO1-210ENST00000548263 ST20-MTHFSA0A0A6YYL1 179 aa12.43□□□□□ -0.42
CALCOCO1-210ENST00000548263 CUL7Q14999 1698 aa12.43□□□□□ -0.42
CALCOCO1-210ENST00000548263 KIAA0586Q9BVV6 1533 aa12.42□□□□□ -0.42
CALCOCO1-210ENST00000548263 SAFB2Q14151 953 aaKnown RBP eCLIP12.42□□□□□ -0.42
CALCOCO1-210ENST00000548263 PDE4AP27815 886 aa12.42□□□□□ -0.42
CALCOCO1-210ENST00000548263 RALBP1Q15311 655 aa12.42□□□□□ -0.42
CALCOCO1-210ENST00000548263 KNSTRNQ9Y448 316 aa12.41□□□□□ -0.42
CALCOCO1-210ENST00000548263 PLIN1O60240 522 aa12.41□□□□□ -0.42
CALCOCO1-210ENST00000548263 AKNAQ7Z591 1439 aa12.41□□□□□ -0.42
CALCOCO1-210ENST00000548263 UPF2Q9HAU5 1272 aaKnown RBP12.41□□□□□ -0.42
CALCOCO1-210ENST00000548263 USP47Q96K76 1375 aa12.41□□□□□ -0.42
CALCOCO1-210ENST00000548263 NAIPQ13075 1403 aa12.4□□□□□ -0.42
CALCOCO1-210ENST00000548263 RRP1P56182 461 aaKnown RBP12.39□□□□□ -0.43
CALCOCO1-210ENST00000548263 SPAG9O60271 1321 aaKnown RBP12.39□□□□□ -0.43
CALCOCO1-210ENST00000548263 ABCA5Q8WWZ7 1642 aa12.39□□□□□ -0.43
CALCOCO1-210ENST00000548263 TNNT2P45379 298 aaPredicted RBP12.39□□□□□ -0.43
CALCOCO1-210ENST00000548263 NLRP13Q86W25 1043 aa12.38□□□□□ -0.43
CALCOCO1-210ENST00000548263 ESF1Q9H501 851 aaKnown RBP12.38□□□□□ -0.43
CALCOCO1-210ENST00000548263 KTN1Q86UP2 1357 aaKnown RBP12.38□□□□□ -0.43
CALCOCO1-210ENST00000548263 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.38□□□□□ -0.43
CALCOCO1-210ENST00000548263 OSCARQ8IYS5 282 aa12.38□□□□□ -0.43
CALCOCO1-210ENST00000548263 MAP3K1Q13233 1512 aa12.37□□□□□ -0.43
CALCOCO1-210ENST00000548263 KIF15Q9NS87 1388 aa12.37□□□□□ -0.43
CALCOCO1-210ENST00000548263 SLC4A3P48751 1232 aa12.37□□□□□ -0.43
CALCOCO1-210ENST00000548263 ARHGEF11O15085 1522 aa12.37□□□□□ -0.43
CALCOCO1-210ENST00000548263 SYNJ2O15056 1496 aa12.36□□□□□ -0.43
CALCOCO1-210ENST00000548263 PLEKHG5O94827 1062 aa12.36□□□□□ -0.43
CALCOCO1-210ENST00000548263 MYBBP1AQ9BQG0 1328 aaKnown RBP12.36□□□□□ -0.43
CALCOCO1-210ENST00000548263 ROCK2O75116 1388 aaKnown RBP12.36□□□□□ -0.43
CALCOCO1-210ENST00000548263 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.36□□□□□ -0.43
CALCOCO1-210ENST00000548263 NEUROD2Q15784 382 aa12.35□□□□□ -0.43
CALCOCO1-210ENST00000548263 ARID4BQ4LE39 1312 aaPredicted RBP12.35□□□□□ -0.43
CALCOCO1-210ENST00000548263 TROQ12816 1431 aaPredicted RBP12.35□□□□□ -0.43
CALCOCO1-210ENST00000548263 EHBP1L1Q8N3D4 1523 aa12.35□□□□□ -0.43
CALCOCO1-210ENST00000548263 TMF1P82094 1093 aa12.35□□□□□ -0.43
CALCOCO1-210ENST00000548263 ANKRD50Q9ULJ7 1429 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms