RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 PREX2Q70Z35 1606 aa20.27■□□□□ 0.84
SMPDL3B-205ENST00000548116 CDC42BPBQ9Y5S2 1711 aa20.27■□□□□ 0.84
SMPDL3B-205ENST00000548116 NAIPQ13075 1403 aa20.26■□□□□ 0.83
SMPDL3B-205ENST00000548116 KCNH8Q96L42 1107 aa20.24■□□□□ 0.83
SMPDL3B-205ENST00000548116 ZNF777Q9ULD5 760 aaPredicted RBP20.24■□□□□ 0.83
SMPDL3B-205ENST00000548116 AKNAQ7Z591 1439 aa20.23■□□□□ 0.83
SMPDL3B-205ENST00000548116 CHIC2Q9UKJ5 165 aa20.23■□□□□ 0.83
SMPDL3B-205ENST00000548116 WDR7Q9Y4E6 1490 aa20.23■□□□□ 0.83
SMPDL3B-205ENST00000548116 MYO5CQ9NQX4 1742 aa20.21■□□□□ 0.83
SMPDL3B-205ENST00000548116 GCC2Q8IWJ2 1684 aa20.2■□□□□ 0.82
SMPDL3B-205ENST00000548116 SAMD9LQ8IVG5 1584 aa20.2■□□□□ 0.82
SMPDL3B-205ENST00000548116 RIMBP3CA6NJZ7 1639 aa20.19■□□□□ 0.82
SMPDL3B-205ENST00000548116 RIMBP3BA6NNM3 1639 aa20.19■□□□□ 0.82
SMPDL3B-205ENST00000548116 RIMBP3Q9UFD9 1639 aa20.19■□□□□ 0.82
SMPDL3B-205ENST00000548116 ROCK1Q13464 1354 aa20.19■□□□□ 0.82
SMPDL3B-205ENST00000548116 RRP7BPQ9NSQ0 103 aa20.19■□□□□ 0.82
SMPDL3B-205ENST00000548116 CROCC2H7BZ55 1655 aa20.19■□□□□ 0.82
SMPDL3B-205ENST00000548116 ASXL2Q76L83 1435 aa20.18■□□□□ 0.82
SMPDL3B-205ENST00000548116 CLSPNQ9HAW4 1339 aa20.17■□□□□ 0.82
SMPDL3B-205ENST00000548116 ARHGAP5Q13017 1502 aa20.16■□□□□ 0.82
SMPDL3B-205ENST00000548116 PLCH2O75038 1416 aa20.16■□□□□ 0.82
SMPDL3B-205ENST00000548116 MBD5Q9P267 1494 aa20.16■□□□□ 0.82
SMPDL3B-205ENST00000548116 ARHGEF5Q12774 1597 aa20.15■□□□□ 0.82
SMPDL3B-205ENST00000548116 KDM6BO15054 1643 aa20.14■□□□□ 0.81
SMPDL3B-205ENST00000548116 ADGRL2O95490 1459 aa20.13■□□□□ 0.81
SMPDL3B-205ENST00000548116 MAPKBP1O60336 1514 aa20.13■□□□□ 0.81
SMPDL3B-205ENST00000548116 NPM1P06748 294 aaKnown RBP eCLIP20.13■□□□□ 0.81
SMPDL3B-205ENST00000548116 ADGBQ8N7X0 1667 aa20.13■□□□□ 0.81
SMPDL3B-205ENST00000548116 ABCA9Q8IUA7 1624 aa20.12■□□□□ 0.81
SMPDL3B-205ENST00000548116 SHANK2Q9UPX8 1470 aa20.12■□□□□ 0.81
SMPDL3B-205ENST00000548116 HNRNPMP52272 730 aaKnown RBP eCLIP20.12■□□□□ 0.81
SMPDL3B-205ENST00000548116 NCOA1Q15788 1441 aa20.11■□□□□ 0.81
SMPDL3B-205ENST00000548116 ARAP3Q8WWN8 1544 aa20.1■□□□□ 0.81
SMPDL3B-205ENST00000548116 SYCP2Q9BX26 1530 aa20.09■□□□□ 0.81
SMPDL3B-205ENST00000548116 CYB5RLQ6IPT4 315 aa20.09■□□□□ 0.81
SMPDL3B-205ENST00000548116 KIAA1107Q9UPP5 1409 aa20.08■□□□□ 0.81
SMPDL3B-205ENST00000548116 C9orf84Q5VXU9 1444 aa20.08■□□□□ 0.8
SMPDL3B-205ENST00000548116 CCDC141Q6ZP82 1450 aa20.07■□□□□ 0.8
SMPDL3B-205ENST00000548116 PLEKHH2Q8IVE3 1493 aa20.07■□□□□ 0.8
SMPDL3B-205ENST00000548116 ARHGEF12Q9NZN5 1544 aa20.06■□□□□ 0.8
SMPDL3B-205ENST00000548116 EFCAB2Q5VUJ9 269 aa20.06■□□□□ 0.8
SMPDL3B-205ENST00000548116 RSPH4AQ5TD94 716 aa20.05■□□□□ 0.8
SMPDL3B-205ENST00000548116 ANKRD30AQ9BXX3 1397 aa20.05■□□□□ 0.8
SMPDL3B-205ENST00000548116 ABCC1P33527 1531 aa20.04■□□□□ 0.8
SMPDL3B-205ENST00000548116 TSPY4P0CV99 314 aa20.03■□□□□ 0.8
SMPDL3B-205ENST00000548116 TSPY10P0CW01 314 aa20.03■□□□□ 0.8
SMPDL3B-205ENST00000548116 MAST1Q9Y2H9 1570 aa20.01■□□□□ 0.79
SMPDL3B-205ENST00000548116 FANCAO15360 1455 aa19.99■□□□□ 0.79
SMPDL3B-205ENST00000548116 DENND4BO75064 1496 aaPredicted RBP19.98■□□□□ 0.79
SMPDL3B-205ENST00000548116 TRAPPC8Q9Y2L5 1435 aa19.97■□□□□ 0.79
SMPDL3B-205ENST00000548116 ANKRD50Q9ULJ7 1429 aa19.96■□□□□ 0.79
SMPDL3B-205ENST00000548116 ACIN1Q9UKV3 1341 aaKnown RBP19.96■□□□□ 0.79
SMPDL3B-205ENST00000548116 KIF15Q9NS87 1388 aa19.95■□□□□ 0.78
SMPDL3B-205ENST00000548116 TRIM52Q96A61 297 aa19.95■□□□□ 0.78
SMPDL3B-205ENST00000548116 CD109Q6YHK3 1445 aa19.94■□□□□ 0.78
SMPDL3B-205ENST00000548116 PLXNC1O60486 1568 aa19.92■□□□□ 0.78
SMPDL3B-205ENST00000548116 SIN3AQ96ST3 1273 aa19.92■□□□□ 0.78
SMPDL3B-205ENST00000548116 MPHOSPH9Q99550 1183 aa19.91■□□□□ 0.78
SMPDL3B-205ENST00000548116 ADGRL1O94910 1474 aa19.9■□□□□ 0.78
SMPDL3B-205ENST00000548116 PZPP20742 1482 aa19.89■□□□□ 0.77
SMPDL3B-205ENST00000548116 AFAP1Q8N556 730 aa19.88■□□□□ 0.77
SMPDL3B-205ENST00000548116 SCAPERQ9BY12 1400 aa19.88■□□□□ 0.77
SMPDL3B-205ENST00000548116 GLI2P10070 1586 aa19.88■□□□□ 0.77
SMPDL3B-205ENST00000548116 CFAP74Q9C0B2 1584 aa19.87■□□□□ 0.77
SMPDL3B-205ENST00000548116 MAP3K4Q9Y6R4 1608 aa19.86■□□□□ 0.77
SMPDL3B-205ENST00000548116 RTEL1-TNFRSF6BF6WH68 1400 aa19.86■□□□□ 0.77
SMPDL3B-205ENST00000548116 ZFYVE16Q7Z3T8 1539 aa19.85■□□□□ 0.77
SMPDL3B-205ENST00000548116 NEUROD1Q13562 356 aa19.84■□□□□ 0.77
SMPDL3B-205ENST00000548116 SPAG9O60271 1321 aaKnown RBP19.84■□□□□ 0.77
SMPDL3B-205ENST00000548116 KDM5DQ9BY66 1539 aa19.84■□□□□ 0.77
SMPDL3B-205ENST00000548116 DUOX2Q9NRD8 1548 aa19.84■□□□□ 0.77
SMPDL3B-205ENST00000548116 DIP2BQ9P265 1576 aa19.83■□□□□ 0.77
SMPDL3B-205ENST00000548116 INO80Q9ULG1 1556 aaPredicted RBP19.83■□□□□ 0.77
SMPDL3B-205ENST00000548116 SLC4A1APQ9BWU0 796 aaKnown RBP19.82■□□□□ 0.76
SMPDL3B-205ENST00000548116 NEO1Q92859 1461 aa19.81■□□□□ 0.76
SMPDL3B-205ENST00000548116 FOXD1Q16676 465 aa19.8■□□□□ 0.76
SMPDL3B-205ENST00000548116 ATP7AQ04656 1500 aa19.8■□□□□ 0.76
SMPDL3B-205ENST00000548116 TIMELESSQ9UNS1 1208 aa19.8■□□□□ 0.76
SMPDL3B-205ENST00000548116 NUP155O75694 1391 aa19.79■□□□□ 0.76
SMPDL3B-205ENST00000548116 ERBINQ96RT1 1412 aa19.79■□□□□ 0.76
SMPDL3B-205ENST00000548116 ANKRD30BQ9BXX2 1392 aa19.79■□□□□ 0.76
SMPDL3B-205ENST00000548116 UNC13BO14795 1591 aa19.79■□□□□ 0.76
SMPDL3B-205ENST00000548116 ZNF518AQ6AHZ1 1483 aa19.78■□□□□ 0.76
SMPDL3B-205ENST00000548116 POGZQ7Z3K3 1410 aa19.78■□□□□ 0.76
SMPDL3B-205ENST00000548116 FAM69CQ0P6D2 419 aa19.77■□□□□ 0.76
SMPDL3B-205ENST00000548116 KDM5CP41229 1560 aa19.76■□□□□ 0.75
SMPDL3B-205ENST00000548116 KIDINS220Q9ULH0 1771 aa19.75■□□□□ 0.75
SMPDL3B-205ENST00000548116 MAGI2Q86UL8 1455 aa19.74■□□□□ 0.75
SMPDL3B-205ENST00000548116 PKD2Q13563 968 aa19.73■□□□□ 0.75
SMPDL3B-205ENST00000548116 FAM135AQ9P2D6 1515 aa19.73■□□□□ 0.75
SMPDL3B-205ENST00000548116 PPRC1Q5VV67 1664 aaKnown RBP19.72■□□□□ 0.75
SMPDL3B-205ENST00000548116 TONSLQ96HA7 1378 aa19.71■□□□□ 0.75
SMPDL3B-205ENST00000548116 MLH3Q9UHC1 1453 aa19.71■□□□□ 0.75
SMPDL3B-205ENST00000548116 IQGAP3Q86VI3 1631 aa19.7■□□□□ 0.74
SMPDL3B-205ENST00000548116 PPP1R15AO75807 674 aaPredicted RBP19.69■□□□□ 0.74
SMPDL3B-205ENST00000548116 RPRD2Q5VT52 1461 aaKnown RBP19.69■□□□□ 0.74
SMPDL3B-205ENST00000548116 KIF13AQ9H1H9 1805 aa19.69■□□□□ 0.74
SMPDL3B-205ENST00000548116 DHX29Q7Z478 1369 aaKnown RBP19.68■□□□□ 0.74
SMPDL3B-205ENST00000548116 HECW2Q9P2P5 1572 aa19.68■□□□□ 0.74
SMPDL3B-205ENST00000548116 RICTORQ6R327 1708 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms