RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 YEATS2Q9ULM3 1422 aa13.04□□□□□ -0.32
TMEM116-205ENST00000547878 DENND4BO75064 1496 aaPredicted RBP13.03□□□□□ -0.32
TMEM116-205ENST00000547878 FHOD3Q2V2M9 1422 aa13.02□□□□□ -0.32
TMEM116-205ENST00000547878 PRXQ9BXM0 1461 aa13.02□□□□□ -0.32
TMEM116-205ENST00000547878 MLECQ14165 292 aa13.02□□□□□ -0.33
TMEM116-205ENST00000547878 FANCAO15360 1455 aa13.01□□□□□ -0.33
TMEM116-205ENST00000547878 SPATA31D1Q6ZQQ2 1576 aa13.01□□□□□ -0.33
TMEM116-205ENST00000547878 RAPGEF6Q8TEU7 1601 aa13.01□□□□□ -0.33
TMEM116-205ENST00000547878 CCER1Q8TC90 406 aaPredicted RBP13.01□□□□□ -0.33
TMEM116-205ENST00000547878 AKNAQ7Z591 1439 aa13.01□□□□□ -0.33
TMEM116-205ENST00000547878 TTC37Q6PGP7 1564 aa13□□□□□ -0.33
TMEM116-205ENST00000547878 VPS8Q8N3P4 1428 aa13□□□□□ -0.33
TMEM116-205ENST00000547878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13□□□□□ -0.33
TMEM116-205ENST00000547878 HNRNPUL2Q1KMD3 747 aaKnown RBP13□□□□□ -0.33
TMEM116-205ENST00000547878 FER1L4A9Z1Z3 1794 aa13□□□□□ -0.33
TMEM116-205ENST00000547878 ZMYM4Q5VZL5 1548 aa13□□□□□ -0.33
TMEM116-205ENST00000547878 NUP153P49790 1475 aaKnown RBP13□□□□□ -0.33
TMEM116-205ENST00000547878 POGZQ7Z3K3 1410 aa13□□□□□ -0.33
TMEM116-205ENST00000547878 ZFYVE16Q7Z3T8 1539 aa12.99□□□□□ -0.33
TMEM116-205ENST00000547878 STRCQ7RTU9 1775 aa12.99□□□□□ -0.33
TMEM116-205ENST00000547878 CLIP1P30622 1438 aa12.98□□□□□ -0.33
TMEM116-205ENST00000547878 UBTFP17480 764 aaKnown RBP12.98□□□□□ -0.33
TMEM116-205ENST00000547878 SAMD9Q5K651 1589 aa12.98□□□□□ -0.33
TMEM116-205ENST00000547878 CEBPAP49715 358 aaPredicted RBP12.96□□□□□ -0.33
TMEM116-205ENST00000547878 PREX1Q8TCU6 1659 aa12.96□□□□□ -0.33
TMEM116-205ENST00000547878 HECW1Q76N89 1606 aa12.96□□□□□ -0.33
TMEM116-205ENST00000547878 EFCAB5A4FU69 1503 aa12.96□□□□□ -0.33
TMEM116-205ENST00000547878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.96□□□□□ -0.33
TMEM116-205ENST00000547878 ARHGEF12Q9NZN5 1544 aa12.95□□□□□ -0.34
TMEM116-205ENST00000547878 CFAP74Q9C0B2 1584 aa12.94□□□□□ -0.34
TMEM116-205ENST00000547878 ACIN1Q9UKV3 1341 aaKnown RBP12.94□□□□□ -0.34
TMEM116-205ENST00000547878 MAGI2Q86UL8 1455 aa12.93□□□□□ -0.34
TMEM116-205ENST00000547878 PLEKHD1A6NEE1 506 aa12.9□□□□□ -0.34
TMEM116-205ENST00000547878 LTBP4Q8N2S1 1624 aa12.89□□□□□ -0.35
TMEM116-205ENST00000547878 DMRT2Q9Y5R5 561 aa12.89□□□□□ -0.35
TMEM116-205ENST00000547878 SCAPERQ9BY12 1400 aa12.89□□□□□ -0.35
TMEM116-205ENST00000547878 ATP10AO60312 1499 aa12.88□□□□□ -0.35
TMEM116-205ENST00000547878 UHRF1BP1Q6BDS2 1440 aa12.88□□□□□ -0.35
TMEM116-205ENST00000547878 RANGAP1P46060 587 aaPredicted RBP12.88□□□□□ -0.35
TMEM116-205ENST00000547878 C9orf84Q5VXU9 1444 aa12.87□□□□□ -0.35
TMEM116-205ENST00000547878 PTPRTO14522 1441 aa12.86□□□□□ -0.35
TMEM116-205ENST00000547878 CDK13Q14004 1512 aaKnown RBP12.85□□□□□ -0.35
TMEM116-205ENST00000547878 PLCH2O75038 1416 aa12.84□□□□□ -0.35
TMEM116-205ENST00000547878 C3P01024 1663 aa12.82□□□□□ -0.36
TMEM116-205ENST00000547878 DIEXFQ68CQ4 756 aaKnown RBP12.82□□□□□ -0.36
TMEM116-205ENST00000547878 IQSEC2Q5JU85 1478 aa12.8□□□□□ -0.36
TMEM116-205ENST00000547878 SETD1BQ9UPS6 1966 aaKnown RBP12.8□□□□□ -0.36
TMEM116-205ENST00000547878 NCOA1Q15788 1441 aa12.79□□□□□ -0.36
TMEM116-205ENST00000547878 AFAP1Q8N556 730 aa12.79□□□□□ -0.36
TMEM116-205ENST00000547878 DIP2CQ9Y2E4 1556 aa12.79□□□□□ -0.36
TMEM116-205ENST00000547878 KDM5CP41229 1560 aa12.77□□□□□ -0.36
TMEM116-205ENST00000547878 CLSPNQ9HAW4 1339 aa12.77□□□□□ -0.36
TMEM116-205ENST00000547878 ANP32EQ9BTT0 268 aa12.77□□□□□ -0.36
TMEM116-205ENST00000547878 MYO5CQ9NQX4 1742 aa12.77□□□□□ -0.37
TMEM116-205ENST00000547878 ZNF518AQ6AHZ1 1483 aa12.77□□□□□ -0.37
TMEM116-205ENST00000547878 EFCAB2Q5VUJ9 269 aa12.76□□□□□ -0.37
TMEM116-205ENST00000547878 ABCA6Q8N139 1617 aa12.76□□□□□ -0.37
TMEM116-205ENST00000547878 KIF14Q15058 1648 aa12.75□□□□□ -0.37
TMEM116-205ENST00000547878 ZNF335Q9H4Z2 1342 aaPredicted RBP12.75□□□□□ -0.37
TMEM116-205ENST00000547878 TRAPPC8Q9Y2L5 1435 aa12.75□□□□□ -0.37
TMEM116-205ENST00000547878 ZNF316A6NFI3 1004 aaPredicted RBP12.75□□□□□ -0.37
TMEM116-205ENST00000547878 UBAP1LF5GYI3 381 aa12.75□□□□□ -0.37
TMEM116-205ENST00000547878 REREQ9P2R6 1566 aa12.74□□□□□ -0.37
TMEM116-205ENST00000547878 RRBP1Q9P2E9 1410 aaKnown RBP12.74□□□□□ -0.37
TMEM116-205ENST00000547878 CAMSAP1Q5T5Y3 1602 aa12.74□□□□□ -0.37
TMEM116-205ENST00000547878 NCKAP5LQ9HCH0 1330 aa12.72□□□□□ -0.37
TMEM116-205ENST00000547878 MYT1LQ9UL68 1186 aa12.72□□□□□ -0.37
TMEM116-205ENST00000547878 GTF3C3Q9Y5Q9 886 aa12.71□□□□□ -0.37
TMEM116-205ENST00000547878 ARHGAP5Q13017 1502 aa12.71□□□□□ -0.37
TMEM116-205ENST00000547878 MAP3K1Q13233 1512 aa12.71□□□□□ -0.37
TMEM116-205ENST00000547878 AGLP35573 1532 aa12.71□□□□□ -0.38
TMEM116-205ENST00000547878 MED1Q15648 1581 aaPredicted RBP12.7□□□□□ -0.38
TMEM116-205ENST00000547878 MLH3Q9UHC1 1453 aa12.7□□□□□ -0.38
TMEM116-205ENST00000547878 ARHGAP35Q9NRY4 1499 aa12.69□□□□□ -0.38
TMEM116-205ENST00000547878 NEUROD1Q13562 356 aa12.68□□□□□ -0.38
TMEM116-205ENST00000547878 ESF1Q9H501 851 aaKnown RBP12.68□□□□□ -0.38
TMEM116-205ENST00000547878 ATP1B4Q9UN42 357 aaPredicted RBP12.68□□□□□ -0.38
TMEM116-205ENST00000547878 CDC42BPBQ9Y5S2 1711 aa12.67□□□□□ -0.38
TMEM116-205ENST00000547878 HSPA1LP34931 641 aa12.67□□□□□ -0.38
TMEM116-205ENST00000547878 KIDINS220Q9ULH0 1771 aa12.66□□□□□ -0.38
TMEM116-205ENST00000547878 TROQ12816 1431 aaPredicted RBP12.65□□□□□ -0.38
TMEM116-205ENST00000547878 NPATQ14207 1427 aa12.65□□□□□ -0.38
TMEM116-205ENST00000547878 CNTLNQ9NXG0 1405 aa12.65□□□□□ -0.38
TMEM116-205ENST00000547878 ABCC1P33527 1531 aa12.65□□□□□ -0.38
TMEM116-205ENST00000547878 DHX57Q6P158 1386 aaKnown RBP12.65□□□□□ -0.39
TMEM116-205ENST00000547878 ZMYM3Q14202 1370 aa12.64□□□□□ -0.39
TMEM116-205ENST00000547878 TCOF1Q13428 1488 aaKnown RBP12.64□□□□□ -0.39
TMEM116-205ENST00000547878 MROH2AA6NES4 1674 aa12.64□□□□□ -0.39
TMEM116-205ENST00000547878 ITSN2Q9NZM3 1697 aa12.64□□□□□ -0.39
TMEM116-205ENST00000547878 LRRIQ1Q96JM4 1722 aa12.64□□□□□ -0.39
TMEM116-205ENST00000547878 MYO3AQ8NEV4 1616 aa12.63□□□□□ -0.39
TMEM116-205ENST00000547878 ZNF142P52746 1687 aaPredicted RBP12.63□□□□□ -0.39
TMEM116-205ENST00000547878 PIP4K2BP78356 416 aa12.62□□□□□ -0.39
TMEM116-205ENST00000547878 PLA2R1Q13018 1463 aa12.62□□□□□ -0.39
TMEM116-205ENST00000547878 FOXD1Q16676 465 aa12.62□□□□□ -0.39
TMEM116-205ENST00000547878 PREX2Q70Z35 1606 aa12.61□□□□□ -0.39
TMEM116-205ENST00000547878 TIAM1Q13009 1591 aa12.61□□□□□ -0.39
TMEM116-205ENST00000547878 CDK11AQ9UQ88 783 aaPredicted RBP12.61□□□□□ -0.39
TMEM116-205ENST00000547878 CEP170BQ9Y4F5 1589 aaPredicted RBP12.61□□□□□ -0.39
TMEM116-205ENST00000547878 CLTCQ00610 1675 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms