RNA–Protein interactions for RNA: ENST00000546561.2

TSPAN8-203, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,168 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-203ENST00000546561 MAMSTRQ6ZN01 415 aa12.19□□□□□ -0.46
TSPAN8-203ENST00000546561 FHOD3Q2V2M9 1422 aa12.18□□□□□ -0.46
TSPAN8-203ENST00000546561 CARMIL2Q6F5E8 1435 aa12.17□□□□□ -0.46
TSPAN8-203ENST00000546561 PCF11O94913 1555 aaKnown RBP12.17□□□□□ -0.46
TSPAN8-203ENST00000546561 FYCO1Q9BQS8 1478 aa12.16□□□□□ -0.46
TSPAN8-203ENST00000546561 SHROOM2Q13796 1616 aa12.16□□□□□ -0.46
TSPAN8-203ENST00000546561 CFAP43Q8NDM7 1665 aa12.15□□□□□ -0.46
TSPAN8-203ENST00000546561 FAM163AQ96GL9 167 aaPredicted RBP12.14□□□□□ -0.47
TSPAN8-203ENST00000546561 CLASP1Q7Z460 1538 aa12.14□□□□□ -0.47
TSPAN8-203ENST00000546561 DISP1Q96F81 1524 aa12.14□□□□□ -0.47
TSPAN8-203ENST00000546561 HECW1Q76N89 1606 aa12.14□□□□□ -0.47
TSPAN8-203ENST00000546561 PAK3O75914 559 aaPredicted RBP12.13□□□□□ -0.47
TSPAN8-203ENST00000546561 LCE2DQ5TA82 110 aaPredicted RBP12.13□□□□□ -0.47
TSPAN8-203ENST00000546561 CASKIN1Q8WXD9 1431 aa12.12□□□□□ -0.47
TSPAN8-203ENST00000546561 MAP3K1Q13233 1512 aa12.12□□□□□ -0.47
TSPAN8-203ENST00000546561 P3H3Q8IVL6 736 aa12.12□□□□□ -0.47
TSPAN8-203ENST00000546561 PELP1Q8IZL8 1130 aaKnown RBP12.12□□□□□ -0.47
TSPAN8-203ENST00000546561 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
TSPAN8-203ENST00000546561 TIAM1Q13009 1591 aa12.1□□□□□ -0.47
TSPAN8-203ENST00000546561 JPH4Q96JJ6 628 aa12.1□□□□□ -0.47
TSPAN8-203ENST00000546561 CCDC18Q5T9S5 1454 aa12.08□□□□□ -0.47
TSPAN8-203ENST00000546561 RAPGEF6Q8TEU7 1601 aa12.08□□□□□ -0.48
TSPAN8-203ENST00000546561 C7P10643 843 aa12.08□□□□□ -0.48
TSPAN8-203ENST00000546561 SLC39A7Q92504 469 aa12.08□□□□□ -0.48
TSPAN8-203ENST00000546561 PRG4Q92954 1404 aaPredicted RBP12.07□□□□□ -0.48
TSPAN8-203ENST00000546561 LRRIQ1Q96JM4 1722 aa12.06□□□□□ -0.48
TSPAN8-203ENST00000546561 POTEJP0CG39 1038 aa12.05□□□□□ -0.48
TSPAN8-203ENST00000546561 PHF12Q96QT6 1004 aa12.05□□□□□ -0.48
TSPAN8-203ENST00000546561 SCUBE2Q9NQ36 999 aa12.05□□□□□ -0.48
TSPAN8-203ENST00000546561 TRIM26Q12899 539 aaPredicted RBP12.03□□□□□ -0.48
TSPAN8-203ENST00000546561 CREBZFQ9NS37 354 aa12.03□□□□□ -0.48
TSPAN8-203ENST00000546561 ATP1B4Q9UN42 357 aaPredicted RBP12.03□□□□□ -0.48
TSPAN8-203ENST00000546561 EHBP1L1Q8N3D4 1523 aa12.01□□□□□ -0.49
TSPAN8-203ENST00000546561 ASTLQ6HA08 431 aaPredicted RBP12.01□□□□□ -0.49
TSPAN8-203ENST00000546561 LRRC9Q6ZRR7 1453 aa12.01□□□□□ -0.49
TSPAN8-203ENST00000546561 EPRSP07814 1512 aaKnown RBP12.01□□□□□ -0.49
TSPAN8-203ENST00000546561 ABCA8O94911 1581 aa12.01□□□□□ -0.49
TSPAN8-203ENST00000546561 PTPRGP23470 1445 aa11.99□□□□□ -0.49
TSPAN8-203ENST00000546561 SUPT6HQ7KZ85 1726 aaKnown RBP11.99□□□□□ -0.49
TSPAN8-203ENST00000546561 PPARGC1BQ86YN6 1023 aaKnown RBP11.98□□□□□ -0.49
TSPAN8-203ENST00000546561 ERCC6L2Q5T890 1561 aa11.97□□□□□ -0.49
TSPAN8-203ENST00000546561 NUP153P49790 1475 aaKnown RBP11.97□□□□□ -0.49
TSPAN8-203ENST00000546561 PLB1Q6P1J6 1458 aa11.97□□□□□ -0.49
TSPAN8-203ENST00000546561 TTBK1Q5TCY1 1321 aaPredicted RBP11.97□□□□□ -0.49
TSPAN8-203ENST00000546561 CDAN1Q8IWY9 1227 aa11.97□□□□□ -0.49
TSPAN8-203ENST00000546561 MTUS2Q5JR59 1369 aa11.96□□□□□ -0.49
TSPAN8-203ENST00000546561 ATMINO43313 823 aaPredicted RBP11.96□□□□□ -0.49
TSPAN8-203ENST00000546561 CDK13Q14004 1512 aaKnown RBP11.95□□□□□ -0.5
TSPAN8-203ENST00000546561 ABCC2Q92887 1545 aa11.95□□□□□ -0.5
TSPAN8-203ENST00000546561 CDK11AQ9UQ88 783 aaPredicted RBP11.94□□□□□ -0.5
TSPAN8-203ENST00000546561 UACAQ9BZF9 1416 aa11.94□□□□□ -0.5
TSPAN8-203ENST00000546561 KANK4Q5T7N3 995 aaPredicted RBP11.93□□□□□ -0.5
TSPAN8-203ENST00000546561 UHRF1BP1LA0JNW5 1464 aa11.92□□□□□ -0.5
TSPAN8-203ENST00000546561 PCGF6Q9BYE7 350 aa11.92□□□□□ -0.5
TSPAN8-203ENST00000546561 STAG3Q9UJ98 1225 aa11.92□□□□□ -0.5
TSPAN8-203ENST00000546561 ADCY10Q96PN6 1610 aa11.91□□□□□ -0.5
TSPAN8-203ENST00000546561 ITSN2Q9NZM3 1697 aa11.89□□□□□ -0.51
TSPAN8-203ENST00000546561 MAGI3Q5TCQ9 1506 aa11.89□□□□□ -0.51
TSPAN8-203ENST00000546561 KIF14Q15058 1648 aa11.89□□□□□ -0.51
TSPAN8-203ENST00000546561 RRBP1Q9P2E9 1410 aaKnown RBP11.88□□□□□ -0.51
TSPAN8-203ENST00000546561 NPM1P06748 294 aaKnown RBP eCLIP11.88□□□□□ -0.51
TSPAN8-203ENST00000546561 MS4A3Q96HJ5 214 aa11.88□□□□□ -0.51
TSPAN8-203ENST00000546561 ZCCHC11Q5TAX3 1644 aaKnown RBP11.88□□□□□ -0.51
TSPAN8-203ENST00000546561 NCOA2Q15596 1464 aa11.88□□□□□ -0.51
TSPAN8-203ENST00000546561 TROQ12816 1431 aaPredicted RBP11.87□□□□□ -0.51
TSPAN8-203ENST00000546561 ATP10BO94823 1461 aa11.87□□□□□ -0.51
TSPAN8-203ENST00000546561 ARHGEF11O15085 1522 aa11.86□□□□□ -0.51
TSPAN8-203ENST00000546561 CCNB3Q8WWL7 1395 aa11.85□□□□□ -0.51
TSPAN8-203ENST00000546561 KDM5BQ9UGL1 1544 aa11.85□□□□□ -0.51
TSPAN8-203ENST00000546561 MYOM3Q5VTT5 1437 aa11.85□□□□□ -0.51
TSPAN8-203ENST00000546561 ARID3CA6NKF2 412 aa11.84□□□□□ -0.51
TSPAN8-203ENST00000546561 SPDYE4A6NLX3 237 aa11.84□□□□□ -0.51
TSPAN8-203ENST00000546561 RIMBP3CA6NJZ7 1639 aa11.83□□□□□ -0.52
TSPAN8-203ENST00000546561 RIMBP3BA6NNM3 1639 aa11.83□□□□□ -0.52
TSPAN8-203ENST00000546561 PHLDB1Q86UU1 1377 aa11.83□□□□□ -0.52
TSPAN8-203ENST00000546561 RIMBP3Q9UFD9 1639 aa11.83□□□□□ -0.52
TSPAN8-203ENST00000546561 PLEKHD1A6NEE1 506 aa11.83□□□□□ -0.52
TSPAN8-203ENST00000546561 FGD6Q6ZV73 1430 aa11.82□□□□□ -0.52
TSPAN8-203ENST00000546561 PTPN23Q9H3S7 1636 aa11.82□□□□□ -0.52
TSPAN8-203ENST00000546561 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.81□□□□□ -0.52
TSPAN8-203ENST00000546561 MIA2Q96PC5 1412 aa11.8□□□□□ -0.52
TSPAN8-203ENST00000546561 CDC42BPAQ5VT25 1732 aa11.8□□□□□ -0.52
TSPAN8-203ENST00000546561 FKBP8Q14318 412 aa11.79□□□□□ -0.52
TSPAN8-203ENST00000546561 MYO5CQ9NQX4 1742 aa11.79□□□□□ -0.52
TSPAN8-203ENST00000546561 MMRN1Q13201 1228 aa11.77□□□□□ -0.53
TSPAN8-203ENST00000546561 PREX2Q70Z35 1606 aa11.77□□□□□ -0.53
TSPAN8-203ENST00000546561 TCOF1Q13428 1488 aaKnown RBP11.76□□□□□ -0.53
TSPAN8-203ENST00000546561 ATN1P54259 1190 aaPredicted RBP11.76□□□□□ -0.53
TSPAN8-203ENST00000546561 ABCC10Q5T3U5 1492 aa11.76□□□□□ -0.53
TSPAN8-203ENST00000546561 WDR7Q9Y4E6 1490 aa11.76□□□□□ -0.53
TSPAN8-203ENST00000546561 FAM50AQ14320 339 aaKnown RBP11.75□□□□□ -0.53
TSPAN8-203ENST00000546561 TTC37Q6PGP7 1564 aa11.74□□□□□ -0.53
TSPAN8-203ENST00000546561 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.73□□□□□ -0.53
TSPAN8-203ENST00000546561 GPATCH8Q9UKJ3 1502 aaKnown RBP11.73□□□□□ -0.53
TSPAN8-203ENST00000546561 CDC42BPBQ9Y5S2 1711 aa11.73□□□□□ -0.53
TSPAN8-203ENST00000546561 DNMT1P26358 1616 aaKnown RBP11.71□□□□□ -0.53
TSPAN8-203ENST00000546561 CROCC2H7BZ55 1655 aa11.71□□□□□ -0.54
TSPAN8-203ENST00000546561 ABCA9Q8IUA7 1624 aa11.71□□□□□ -0.54
TSPAN8-203ENST00000546561 MAPKBP1O60336 1514 aa11.7□□□□□ -0.54
TSPAN8-203ENST00000546561 ARAP3Q8WWN8 1544 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms