RNA–Protein interactions for RNA: ENST00000545467.5

LDHA-224, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-224ENST00000545467 CEBPAP49715 358 aaPredicted RBP12.74□□□□□ -0.37
LDHA-224ENST00000545467 RICTORQ6R327 1708 aa12.74□□□□□ -0.37
LDHA-224ENST00000545467 MAGI2Q86UL8 1455 aa12.73□□□□□ -0.37
LDHA-224ENST00000545467 EFCAB5A4FU69 1503 aa12.72□□□□□ -0.37
LDHA-224ENST00000545467 UBAP1LF5GYI3 381 aa12.72□□□□□ -0.37
LDHA-224ENST00000545467 ZMYM4Q5VZL5 1548 aa12.72□□□□□ -0.37
LDHA-224ENST00000545467 ZFYVE16Q7Z3T8 1539 aa12.72□□□□□ -0.37
LDHA-224ENST00000545467 ARHGEF12Q9NZN5 1544 aa12.71□□□□□ -0.38
LDHA-224ENST00000545467 SIGLEC1Q9BZZ2 1709 aa12.71□□□□□ -0.38
LDHA-224ENST00000545467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.68□□□□□ -0.38
LDHA-224ENST00000545467 HNRNPUL2Q1KMD3 747 aaKnown RBP12.68□□□□□ -0.38
LDHA-224ENST00000545467 EEA1Q15075 1411 aa12.68□□□□□ -0.38
LDHA-224ENST00000545467 CTTNBP2Q8WZ74 1663 aa12.66□□□□□ -0.38
LDHA-224ENST00000545467 ATP10AO60312 1499 aa12.65□□□□□ -0.38
LDHA-224ENST00000545467 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
LDHA-224ENST00000545467 CFAP74Q9C0B2 1584 aa12.64□□□□□ -0.39
LDHA-224ENST00000545467 NCOA1Q15788 1441 aa12.63□□□□□ -0.39
LDHA-224ENST00000545467 C9orf84Q5VXU9 1444 aa12.63□□□□□ -0.39
LDHA-224ENST00000545467 PLEKHD1A6NEE1 506 aa12.63□□□□□ -0.39
LDHA-224ENST00000545467 HECW1Q76N89 1606 aa12.62□□□□□ -0.39
LDHA-224ENST00000545467 LOC105371045A0A1W2PR82 267 aa12.62□□□□□ -0.39
LDHA-224ENST00000545467 P3H3Q8IVL6 736 aa12.62□□□□□ -0.39
LDHA-224ENST00000545467 HSPA1LP34931 641 aa12.61□□□□□ -0.39
LDHA-224ENST00000545467 TRAPPC8Q9Y2L5 1435 aa12.6□□□□□ -0.39
LDHA-224ENST00000545467 ZNF335Q9H4Z2 1342 aaPredicted RBP12.6□□□□□ -0.39
LDHA-224ENST00000545467 SCAPERQ9BY12 1400 aa12.59□□□□□ -0.39
LDHA-224ENST00000545467 RAPGEF6Q8TEU7 1601 aa12.57□□□□□ -0.4
LDHA-224ENST00000545467 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.57□□□□□ -0.42e-17■■■□□ 14.8
LDHA-224ENST00000545467 NUP153P49790 1475 aaKnown RBP12.55□□□□□ -0.4
LDHA-224ENST00000545467 TOM1O60784 492 aa12.55□□□□□ -0.4
LDHA-224ENST00000545467 ESF1Q9H501 851 aaKnown RBP12.55□□□□□ -0.4
LDHA-224ENST00000545467 PIP4K2BP78356 416 aa12.54□□□□□ -0.4
LDHA-224ENST00000545467 PKD2Q13563 968 aa12.54□□□□□ -0.4
LDHA-224ENST00000545467 SCAF1Q9H7N4 1312 aaKnown RBP12.54□□□□□ -0.4
LDHA-224ENST00000545467 NCKAP5LQ9HCH0 1330 aa12.54□□□□□ -0.4
LDHA-224ENST00000545467 C3P01024 1663 aa12.53□□□□□ -0.4
LDHA-224ENST00000545467 PLCH2O75038 1416 aa12.53□□□□□ -0.4
LDHA-224ENST00000545467 CAMSAP1Q5T5Y3 1602 aa12.52□□□□□ -0.4
LDHA-224ENST00000545467 PRXQ9BXM0 1461 aa12.51□□□□□ -0.41
LDHA-224ENST00000545467 EFCAB2Q5VUJ9 269 aa12.5□□□□□ -0.41
LDHA-224ENST00000545467 CNTLNQ9NXG0 1405 aa12.49□□□□□ -0.41
LDHA-224ENST00000545467 NPATQ14207 1427 aa12.48□□□□□ -0.41
LDHA-224ENST00000545467 HRCP23327 699 aa12.48□□□□□ -0.41
LDHA-224ENST00000545467 SAMD9Q5K651 1589 aa12.47□□□□□ -0.41
LDHA-224ENST00000545467 REREQ9P2R6 1566 aa12.47□□□□□ -0.41
LDHA-224ENST00000545467 AGLP35573 1532 aa12.47□□□□□ -0.41
LDHA-224ENST00000545467 PLA2R1Q13018 1463 aa12.47□□□□□ -0.41
LDHA-224ENST00000545467 ZNF518AQ6AHZ1 1483 aa12.47□□□□□ -0.41
LDHA-224ENST00000545467 TRIM26Q12899 539 aaPredicted RBP12.47□□□□□ -0.41
LDHA-224ENST00000545467 AFAP1Q8N556 730 aa12.47□□□□□ -0.41
LDHA-224ENST00000545467 MYT1LQ9UL68 1186 aa12.47□□□□□ -0.41
LDHA-224ENST00000545467 PCGF6Q9BYE7 350 aa12.45□□□□□ -0.42
LDHA-224ENST00000545467 TCOF1Q13428 1488 aaKnown RBP12.45□□□□□ -0.42
LDHA-224ENST00000545467 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
LDHA-224ENST00000545467 RGS17Q9UGC6 210 aaPredicted RBP12.44□□□□□ -0.42
LDHA-224ENST00000545467 KDM5CP41229 1560 aa12.43□□□□□ -0.42
LDHA-224ENST00000545467 DIP2CQ9Y2E4 1556 aa12.43□□□□□ -0.42
LDHA-224ENST00000545467 ZMYM3Q14202 1370 aa12.43□□□□□ -0.42
LDHA-224ENST00000545467 CPS1P31327 1500 aa12.42□□□□□ -0.42
LDHA-224ENST00000545467 PTPRKQ15262 1439 aa12.42□□□□□ -0.42
LDHA-224ENST00000545467 MLH3Q9UHC1 1453 aa12.41□□□□□ -0.42
LDHA-224ENST00000545467 CEP162Q5TB80 1403 aa12.39□□□□□ -0.43
LDHA-224ENST00000545467 SHANK2Q9UPX8 1470 aa12.38□□□□□ -0.43
LDHA-224ENST00000545467 MROH2AA6NES4 1674 aa12.37□□□□□ -0.43
LDHA-224ENST00000545467 ABCA6Q8N139 1617 aa12.37□□□□□ -0.43
LDHA-224ENST00000545467 ZNF142P52746 1687 aaPredicted RBP12.36□□□□□ -0.43
LDHA-224ENST00000545467 MYO5CQ9NQX4 1742 aa12.36□□□□□ -0.43
LDHA-224ENST00000545467 CEP170BQ9Y4F5 1589 aaPredicted RBP12.35□□□□□ -0.43
LDHA-224ENST00000545467 CACNB1Q02641 598 aaPredicted RBP12.35□□□□□ -0.43
LDHA-224ENST00000545467 CSRNP3Q8WYN3 585 aa12.35□□□□□ -0.43
LDHA-224ENST00000545467 CDK11AQ9UQ88 783 aaPredicted RBP12.34□□□□□ -0.43
LDHA-224ENST00000545467 SUPT6HQ7KZ85 1726 aaKnown RBP12.34□□□□□ -0.43
LDHA-224ENST00000545467 ALKQ9UM73 1620 aa12.33□□□□□ -0.43
LDHA-224ENST00000545467 ARHGAP5Q13017 1502 aa12.33□□□□□ -0.44
LDHA-224ENST00000545467 CDK13Q14004 1512 aaKnown RBP12.33□□□□□ -0.44
LDHA-224ENST00000545467 RANGAP1P46060 587 aaPredicted RBP12.33□□□□□ -0.44
LDHA-224ENST00000545467 POTEAQ6S8J7 498 aa12.33□□□□□ -0.44
LDHA-224ENST00000545467 MYO3AQ8NEV4 1616 aa12.33□□□□□ -0.44
LDHA-224ENST00000545467 A2ML1A8K2U0 1454 aa12.29□□□□□ -0.44
LDHA-224ENST00000545467 ANKLE2Q86XL3 938 aa12.27□□□□□ -0.45
LDHA-224ENST00000545467 KIDINS220Q9ULH0 1771 aa12.27□□□□□ -0.45
LDHA-224ENST00000545467 VWDEQ8N2E2 1590 aa12.26□□□□□ -0.45
LDHA-224ENST00000545467 DNMT1P26358 1616 aaKnown RBP12.26□□□□□ -0.45
LDHA-224ENST00000545467 TROQ12816 1431 aaPredicted RBP12.26□□□□□ -0.45
LDHA-224ENST00000545467 NEURL4Q96JN8 1562 aa12.26□□□□□ -0.45
LDHA-224ENST00000545467 ZEB1P37275 1124 aaPredicted RBP12.25□□□□□ -0.45
LDHA-224ENST00000545467 KIF14Q15058 1648 aa12.25□□□□□ -0.45
LDHA-224ENST00000545467 CLTCQ00610 1675 aaKnown RBP12.25□□□□□ -0.45
LDHA-224ENST00000545467 POLR1AO95602 1720 aaPredicted RBP12.24□□□□□ -0.45
LDHA-224ENST00000545467 CLIP1P30622 1438 aa12.24□□□□□ -0.45
LDHA-224ENST00000545467 ABCC1P33527 1531 aa12.24□□□□□ -0.45
LDHA-224ENST00000545467 ATP1B4Q9UN42 357 aaPredicted RBP12.24□□□□□ -0.45
LDHA-224ENST00000545467 GGT6Q6P531 493 aa12.23□□□□□ -0.45
LDHA-224ENST00000545467 LRRC7Q96NW7 1537 aa12.22□□□□□ -0.45
LDHA-224ENST00000545467 THEMISQ8N1K5 641 aaPredicted RBP12.22□□□□□ -0.45
LDHA-224ENST00000545467 UPF1Q92900 1129 aaKnown RBP eCLIP12.22□□□□□ -0.45
LDHA-224ENST00000545467 EHMT2Q96KQ7 1210 aa12.22□□□□□ -0.45
LDHA-224ENST00000545467 CDC42BPBQ9Y5S2 1711 aa12.22□□□□□ -0.45
LDHA-224ENST00000545467 MED14O60244 1454 aa12.21□□□□□ -0.45
LDHA-224ENST00000545467 SPAG9O60271 1321 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms