RNA–Protein interactions for RNA: ENST00000545065.1

KNTC1-214, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-214ENST00000545065 CAMSAP1Q5T5Y3 1602 aa15.04■□□□□ -0
KNTC1-214ENST00000545065 FHOD3Q2V2M9 1422 aa15.04■□□□□ -0
KNTC1-214ENST00000545065 UPF1Q92900 1129 aaKnown RBP eCLIP15.03■□□□□ -0
KNTC1-214ENST00000545065 UGGT2Q9NYU1 1516 aa15.02□□□□□ -0.01
KNTC1-214ENST00000545065 DENND4BO75064 1496 aaPredicted RBP15.01□□□□□ -0.01
KNTC1-214ENST00000545065 EFCAB5A4FU69 1503 aa15□□□□□ -0.01
KNTC1-214ENST00000545065 NCKAP5LQ9HCH0 1330 aa14.99□□□□□ -0.01
KNTC1-214ENST00000545065 TOM1O60784 492 aa14.98□□□□□ -0.01
KNTC1-214ENST00000545065 SENP3Q9H4L4 574 aaPredicted RBP14.96□□□□□ -0.01
KNTC1-214ENST00000545065 HECW1Q76N89 1606 aa14.95□□□□□ -0.02
KNTC1-214ENST00000545065 MAGI2Q86UL8 1455 aa14.91□□□□□ -0.02
KNTC1-214ENST00000545065 TRAPPC8Q9Y2L5 1435 aa14.91□□□□□ -0.02
KNTC1-214ENST00000545065 TCOF1Q13428 1488 aaKnown RBP14.89□□□□□ -0.03
KNTC1-214ENST00000545065 ATP10BO94823 1461 aa14.89□□□□□ -0.03
KNTC1-214ENST00000545065 CPS1P31327 1500 aa14.87□□□□□ -0.03
KNTC1-214ENST00000545065 ATP10AO60312 1499 aa14.87□□□□□ -0.03
KNTC1-214ENST00000545065 CARMIL1Q5VZK9 1371 aa14.86□□□□□ -0.03
KNTC1-214ENST00000545065 C9orf84Q5VXU9 1444 aa14.86□□□□□ -0.03
KNTC1-214ENST00000545065 IFFO2Q5TF58 517 aa14.86□□□□□ -0.03
KNTC1-214ENST00000545065 ARID3CA6NKF2 412 aa14.85□□□□□ -0.03
KNTC1-214ENST00000545065 PTPRKQ15262 1439 aa14.84□□□□□ -0.03
KNTC1-214ENST00000545065 PLA2R1Q13018 1463 aa14.84□□□□□ -0.03
KNTC1-214ENST00000545065 RAPGEF2Q9Y4G8 1499 aa14.83□□□□□ -0.03
KNTC1-214ENST00000545065 ZNF142P52746 1687 aaPredicted RBP14.82□□□□□ -0.04
KNTC1-214ENST00000545065 SUPT6HQ7KZ85 1726 aaKnown RBP14.82□□□□□ -0.04
KNTC1-214ENST00000545065 SHANK2Q9UPX8 1470 aa14.81□□□□□ -0.04
KNTC1-214ENST00000545065 PPP6R1Q9UPN7 881 aa14.8□□□□□ -0.04
KNTC1-214ENST00000545065 PKD2Q13563 968 aa14.79□□□□□ -0.04
KNTC1-214ENST00000545065 CFAP74Q9C0B2 1584 aa14.78□□□□□ -0.04
KNTC1-214ENST00000545065 SETBP1Q9Y6X0 1596 aa14.77□□□□□ -0.04
KNTC1-214ENST00000545065 KIF27Q86VH2 1401 aa14.77□□□□□ -0.04
KNTC1-214ENST00000545065 VWDEQ8N2E2 1590 aa14.77□□□□□ -0.05
KNTC1-214ENST00000545065 MYO3AQ8NEV4 1616 aa14.75□□□□□ -0.05
KNTC1-214ENST00000545065 NEURL4Q96JN8 1562 aa14.75□□□□□ -0.05
KNTC1-214ENST00000545065 STRCP1A6NGW2 1772 aa14.74□□□□□ -0.05
KNTC1-214ENST00000545065 CEP170BQ9Y4F5 1589 aaPredicted RBP14.73□□□□□ -0.05
KNTC1-214ENST00000545065 LRRC7Q96NW7 1537 aa14.72□□□□□ -0.05
KNTC1-214ENST00000545065 NPATQ14207 1427 aa14.72□□□□□ -0.05
KNTC1-214ENST00000545065 RNF17Q9BXT8 1623 aaKnown RBP14.71□□□□□ -0.05
KNTC1-214ENST00000545065 POLR1AO95602 1720 aaPredicted RBP14.7□□□□□ -0.06
KNTC1-214ENST00000545065 DIP2CQ9Y2E4 1556 aa14.69□□□□□ -0.06
KNTC1-214ENST00000545065 AGLP35573 1532 aa14.68□□□□□ -0.06
KNTC1-214ENST00000545065 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.68□□□□□ -0.06
KNTC1-214ENST00000545065 TRIM52Q96A61 297 aa14.68□□□□□ -0.06
KNTC1-214ENST00000545065 REREQ9P2R6 1566 aa14.68□□□□□ -0.06
KNTC1-214ENST00000545065 SCAPERQ9BY12 1400 aa14.67□□□□□ -0.06
KNTC1-214ENST00000545065 MROH2AA6NES4 1674 aa14.66□□□□□ -0.06
KNTC1-214ENST00000545065 ABCA6Q8N139 1617 aa14.63□□□□□ -0.07
KNTC1-214ENST00000545065 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
KNTC1-214ENST00000545065 CTTNBP2Q8WZ74 1663 aa14.62□□□□□ -0.07
KNTC1-214ENST00000545065 DNMT1P26358 1616 aaKnown RBP14.61□□□□□ -0.07
KNTC1-214ENST00000545065 XIRP1Q702N8 1843 aaKnown RBP14.61□□□□□ -0.07
KNTC1-214ENST00000545065 KDM5CP41229 1560 aa14.6□□□□□ -0.07
KNTC1-214ENST00000545065 CNTLNQ9NXG0 1405 aa14.6□□□□□ -0.07
KNTC1-214ENST00000545065 RBM33Q96EV2 1170 aaKnown RBP14.59□□□□□ -0.07
KNTC1-214ENST00000545065 SYNMO15061 1565 aa14.57□□□□□ -0.08
KNTC1-214ENST00000545065 ZMYM3Q14202 1370 aa14.57□□□□□ -0.08
KNTC1-214ENST00000545065 RAPGEF6Q8TEU7 1601 aa14.55□□□□□ -0.08
KNTC1-214ENST00000545065 CDK12Q9NYV4 1490 aaPredicted RBP14.55□□□□□ -0.08
KNTC1-214ENST00000545065 LRP6O75581 1613 aa14.55□□□□□ -0.08
KNTC1-214ENST00000545065 LRP5O75197 1615 aa14.53□□□□□ -0.08
KNTC1-214ENST00000545065 NUP153P49790 1475 aaKnown RBP14.53□□□□□ -0.08
KNTC1-214ENST00000545065 FAM135BQ49AJ0 1406 aa14.53□□□□□ -0.08
KNTC1-214ENST00000545065 ESF1Q9H501 851 aaKnown RBP14.53□□□□□ -0.08
KNTC1-214ENST00000545065 A2ML1A8K2U0 1454 aa14.52□□□□□ -0.08
KNTC1-214ENST00000545065 ZRANB1Q9UGI0 708 aa14.52□□□□□ -0.09
KNTC1-214ENST00000545065 CLTCQ00610 1675 aaKnown RBP14.52□□□□□ -0.09
KNTC1-214ENST00000545065 ROBO1Q9Y6N7 1651 aa14.51□□□□□ -0.09
KNTC1-214ENST00000545065 AFAP1Q8N556 730 aa14.5□□□□□ -0.09
KNTC1-214ENST00000545065 ZNF518AQ6AHZ1 1483 aa14.5□□□□□ -0.09
KNTC1-214ENST00000545065 PLCH2O75038 1416 aa14.49□□□□□ -0.09
KNTC1-214ENST00000545065 MED14O60244 1454 aa14.47□□□□□ -0.09
KNTC1-214ENST00000545065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.47□□□□□ -0.09
KNTC1-214ENST00000545065 HNRNPUL2Q1KMD3 747 aaKnown RBP14.47□□□□□ -0.09
KNTC1-214ENST00000545065 RGS12O14924 1447 aa14.47□□□□□ -0.09
KNTC1-214ENST00000545065 CDK13Q14004 1512 aaKnown RBP14.46□□□□□ -0.09
KNTC1-214ENST00000545065 EP400Q96L91 3159 aa14.46□□□□□ -0.09
KNTC1-214ENST00000545065 IQGAP1P46940 1657 aa14.46□□□□□ -0.1
KNTC1-214ENST00000545065 RXRBP28702 533 aa14.45□□□□□ -0.1
KNTC1-214ENST00000545065 NPHP4O75161 1426 aaPredicted RBP14.44□□□□□ -0.1
KNTC1-214ENST00000545065 ZNF772Q68DY9 489 aaPredicted RBP14.44□□□□□ -0.1
KNTC1-214ENST00000545065 DEPDC5O75140 1603 aa14.44□□□□□ -0.1
KNTC1-214ENST00000545065 MLH3Q9UHC1 1453 aa14.44□□□□□ -0.1
KNTC1-214ENST00000545065 P3H3Q8IVL6 736 aa14.43□□□□□ -0.1
KNTC1-214ENST00000545065 KIDINS220Q9ULH0 1771 aa14.42□□□□□ -0.1
KNTC1-214ENST00000545065 PHLPP1O60346 1717 aa14.42□□□□□ -0.1
KNTC1-214ENST00000545065 ITSN2Q9NZM3 1697 aa14.42□□□□□ -0.1
KNTC1-214ENST00000545065 JCADQ9P266 1359 aa14.4□□□□□ -0.1
KNTC1-214ENST00000545065 MYO5CQ9NQX4 1742 aa14.4□□□□□ -0.1
KNTC1-214ENST00000545065 ZC3H13Q5T200 1668 aaKnown RBP14.39□□□□□ -0.11
KNTC1-214ENST00000545065 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.39□□□□□ -0.11
KNTC1-214ENST00000545065 PLEKHD1A6NEE1 506 aa14.39□□□□□ -0.11
KNTC1-214ENST00000545065 ABCC1P33527 1531 aa14.39□□□□□ -0.11
KNTC1-214ENST00000545065 COL16A1Q07092 1604 aaPredicted RBP14.38□□□□□ -0.11
KNTC1-214ENST00000545065 YY1P25490 414 aa14.35□□□□□ -0.11
KNTC1-214ENST00000545065 ANKLE2Q86XL3 938 aa14.35□□□□□ -0.11
KNTC1-214ENST00000545065 SAMD9Q5K651 1589 aa14.34□□□□□ -0.11
KNTC1-214ENST00000545065 EFCAB2Q5VUJ9 269 aa14.33□□□□□ -0.12
KNTC1-214ENST00000545065 MYT1LQ9UL68 1186 aa14.33□□□□□ -0.12
KNTC1-214ENST00000545065 NUTM2BA6NNL0 878 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms