RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 ROCK1Q13464 1354 aa24.13■■□□□ 1.45
CHFR-224ENST00000545046 SIN3AQ96ST3 1273 aa24.13■■□□□ 1.45
CHFR-224ENST00000545046 TIMELESSQ9UNS1 1208 aa24.13■■□□□ 1.45
CHFR-224ENST00000545046 NEUROD1Q13562 356 aa24.12■■□□□ 1.45
CHFR-224ENST00000545046 CDC42BPAQ5VT25 1732 aa24.12■■□□□ 1.45
CHFR-224ENST00000545046 ABCC10Q5T3U5 1492 aa24.1■■□□□ 1.45
CHFR-224ENST00000545046 ACIN1Q9UKV3 1341 aaKnown RBP24.09■■□□□ 1.45
CHFR-224ENST00000545046 ZNF777Q9ULD5 760 aaPredicted RBP24.09■■□□□ 1.45
CHFR-224ENST00000545046 ABCC2Q92887 1545 aa24.07■■□□□ 1.44
CHFR-224ENST00000545046 KDM6BO15054 1643 aa24.06■■□□□ 1.44
CHFR-224ENST00000545046 TRIM52Q96A61 297 aa24.05■■□□□ 1.44
CHFR-224ENST00000545046 ADGBQ8N7X0 1667 aa24.05■■□□□ 1.44
CHFR-224ENST00000545046 CROCC2H7BZ55 1655 aa24.03■■□□□ 1.44
CHFR-224ENST00000545046 UHRF1BP1LA0JNW5 1464 aa23.96■■□□□ 1.43
CHFR-224ENST00000545046 ADGRL2O95490 1459 aa23.96■■□□□ 1.43
CHFR-224ENST00000545046 TONSLQ96HA7 1378 aa23.96■■□□□ 1.43
CHFR-224ENST00000545046 PREX2Q70Z35 1606 aa23.95■■□□□ 1.43
CHFR-224ENST00000545046 NCOA1Q15788 1441 aa23.95■■□□□ 1.42
CHFR-224ENST00000545046 CDC42BPBQ9Y5S2 1711 aa23.95■■□□□ 1.42
CHFR-224ENST00000545046 MPHOSPH9Q99550 1183 aa23.93■■□□□ 1.42
CHFR-224ENST00000545046 ANKRD30AQ9BXX3 1397 aa23.93■■□□□ 1.42
CHFR-224ENST00000545046 PPP1R15AO75807 674 aaPredicted RBP23.93■■□□□ 1.42
CHFR-224ENST00000545046 ZCCHC11Q5TAX3 1644 aaKnown RBP23.92■■□□□ 1.42
CHFR-224ENST00000545046 SHANK2Q9UPX8 1470 aa23.91■■□□□ 1.42
CHFR-224ENST00000545046 DENND4BO75064 1496 aaPredicted RBP23.9■■□□□ 1.42
CHFR-224ENST00000545046 ARHGEF5Q12774 1597 aa23.89■■□□□ 1.42
CHFR-224ENST00000545046 TSPY4P0CV99 314 aa23.89■■□□□ 1.41
CHFR-224ENST00000545046 TSPY10P0CW01 314 aa23.89■■□□□ 1.41
CHFR-224ENST00000545046 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.89■■□□□ 1.41
CHFR-224ENST00000545046 KDM5BQ9UGL1 1544 aa23.88■■□□□ 1.41
CHFR-224ENST00000545046 TTC37Q6PGP7 1564 aa23.88■■□□□ 1.41
CHFR-224ENST00000545046 MYO5CQ9NQX4 1742 aa23.87■■□□□ 1.41
CHFR-224ENST00000545046 SAMD9LQ8IVG5 1584 aa23.87■■□□□ 1.41
CHFR-224ENST00000545046 C9orf84Q5VXU9 1444 aa23.86■■□□□ 1.41
CHFR-224ENST00000545046 HNRNPMP52272 730 aaKnown RBP eCLIP23.85■■□□□ 1.41
CHFR-224ENST00000545046 RSPH4AQ5TD94 716 aa23.84■■□□□ 1.41
CHFR-224ENST00000545046 ARHGAP5Q13017 1502 aa23.84■■□□□ 1.41
CHFR-224ENST00000545046 KCNH8Q96L42 1107 aa23.84■■□□□ 1.41
CHFR-224ENST00000545046 MBD5Q9P267 1494 aa23.82■■□□□ 1.4
CHFR-224ENST00000545046 SLC4A1APQ9BWU0 796 aaKnown RBP23.82■■□□□ 1.4
CHFR-224ENST00000545046 CCDC141Q6ZP82 1450 aa23.81■■□□□ 1.4
CHFR-224ENST00000545046 ANKRD50Q9ULJ7 1429 aa23.8■■□□□ 1.4
CHFR-224ENST00000545046 OSCARQ8IYS5 282 aa23.79■■□□□ 1.4
CHFR-224ENST00000545046 MIER1Q8N108 512 aa23.79■■□□□ 1.4
CHFR-224ENST00000545046 PLEKHH2Q8IVE3 1493 aa23.77■■□□□ 1.4
CHFR-224ENST00000545046 FOXD1Q16676 465 aa23.76■■□□□ 1.39
CHFR-224ENST00000545046 PZPP20742 1482 aa23.76■■□□□ 1.39
CHFR-224ENST00000545046 ANKRD30BQ9BXX2 1392 aa23.75■■□□□ 1.39
CHFR-224ENST00000545046 SYCP2Q9BX26 1530 aa23.75■■□□□ 1.39
CHFR-224ENST00000545046 PLCH2O75038 1416 aa23.74■■□□□ 1.39
CHFR-224ENST00000545046 KIF15Q9NS87 1388 aa23.73■■□□□ 1.39
CHFR-224ENST00000545046 KIAA1107Q9UPP5 1409 aa23.72■■□□□ 1.39
CHFR-224ENST00000545046 MAST1Q9Y2H9 1570 aa23.71■■□□□ 1.39
CHFR-224ENST00000545046 EFCAB2Q5VUJ9 269 aa23.69■■□□□ 1.38
CHFR-224ENST00000545046 RPRD2Q5VT52 1461 aaKnown RBP23.69■■□□□ 1.38
CHFR-224ENST00000545046 WDR7Q9Y4E6 1490 aa23.66■■□□□ 1.38
CHFR-224ENST00000545046 NUP155O75694 1391 aa23.66■■□□□ 1.38
CHFR-224ENST00000545046 KDM5DQ9BY66 1539 aa23.65■■□□□ 1.38
CHFR-224ENST00000545046 PKD2Q13563 968 aa23.64■■□□□ 1.38
CHFR-224ENST00000545046 L3MBTL2Q969R5 705 aa23.64■■□□□ 1.37
CHFR-224ENST00000545046 ARAP3Q8WWN8 1544 aa23.63■■□□□ 1.37
CHFR-224ENST00000545046 CENPBP07199 599 aaPredicted RBP23.62■■□□□ 1.37
CHFR-224ENST00000545046 PLXNC1O60486 1568 aa23.62■■□□□ 1.37
CHFR-224ENST00000545046 ARHGEF12Q9NZN5 1544 aa23.61■■□□□ 1.37
CHFR-224ENST00000545046 ABCC1P33527 1531 aa23.6■■□□□ 1.37
CHFR-224ENST00000545046 HIRIP3Q9BW71 556 aaPredicted RBP23.58■■□□□ 1.36
CHFR-224ENST00000545046 ABCA9Q8IUA7 1624 aa23.57■■□□□ 1.36
CHFR-224ENST00000545046 NPM1P06748 294 aaKnown RBP eCLIP23.57■■□□□ 1.36
CHFR-224ENST00000545046 TEX14Q8IWB6 1497 aa23.56■■□□□ 1.36
CHFR-224ENST00000545046 ASXL2Q76L83 1435 aa23.56■■□□□ 1.36
CHFR-224ENST00000545046 DUOX2Q9NRD8 1548 aa23.54■■□□□ 1.36
CHFR-224ENST00000545046 DDX10Q13206 875 aaKnown RBP23.53■■□□□ 1.36
CHFR-224ENST00000545046 UNC13BO14795 1591 aa23.52■■□□□ 1.36
CHFR-224ENST00000545046 TRAPPC8Q9Y2L5 1435 aa23.51■■□□□ 1.35
CHFR-224ENST00000545046 FAM135AQ9P2D6 1515 aa23.51■■□□□ 1.35
CHFR-224ENST00000545046 YTHDC1Q96MU7 727 aaKnown RBP23.5■■□□□ 1.35
CHFR-224ENST00000545046 FANCAO15360 1455 aa23.49■■□□□ 1.35
CHFR-224ENST00000545046 ERBINQ96RT1 1412 aa23.48■■□□□ 1.35
CHFR-224ENST00000545046 EIF4G2P78344 907 aaKnown RBP eCLIP23.47■■□□□ 1.35
CHFR-224ENST00000545046 SPAG9O60271 1321 aaKnown RBP23.47■■□□□ 1.35
CHFR-224ENST00000545046 RTEL1-TNFRSF6BF6WH68 1400 aa23.47■■□□□ 1.35
CHFR-224ENST00000545046 HSPA5P11021 654 aaKnown RBP23.45■■□□□ 1.35
CHFR-224ENST00000545046 NBPF8Q3BBV2 869 aa23.45■■□□□ 1.34
CHFR-224ENST00000545046 IQGAP3Q86VI3 1631 aa23.44■■□□□ 1.34
CHFR-224ENST00000545046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.44■■□□□ 1.34
CHFR-224ENST00000545046 AFAP1Q8N556 730 aa23.42■■□□□ 1.34
CHFR-224ENST00000545046 ADGRL1O94910 1474 aa23.41■■□□□ 1.34
CHFR-224ENST00000545046 ZFYVE16Q7Z3T8 1539 aa23.4■■□□□ 1.34
CHFR-224ENST00000545046 MAGI2Q86UL8 1455 aa23.39■■□□□ 1.33
CHFR-224ENST00000545046 SCAPERQ9BY12 1400 aa23.38■■□□□ 1.33
CHFR-224ENST00000545046 ATP7AQ04656 1500 aa23.36■■□□□ 1.33
CHFR-224ENST00000545046 INO80Q9ULG1 1556 aaPredicted RBP23.36■■□□□ 1.33
CHFR-224ENST00000545046 CFAP74Q9C0B2 1584 aa23.34■■□□□ 1.33
CHFR-224ENST00000545046 MYT1LQ9UL68 1186 aa23.33■■□□□ 1.33
CHFR-224ENST00000545046 CCDC144AA2RUR9 1427 aa23.33■■□□□ 1.33
CHFR-224ENST00000545046 CD109Q6YHK3 1445 aa23.32■■□□□ 1.32
CHFR-224ENST00000545046 UHRF1BP1Q6BDS2 1440 aa23.32■■□□□ 1.32
CHFR-224ENST00000545046 ANP32CO43423 234 aa23.31■■□□□ 1.32
CHFR-224ENST00000545046 ZNF326Q5BKZ1 582 aaKnown RBP23.31■■□□□ 1.32
CHFR-224ENST00000545046 SCAF1Q9H7N4 1312 aaKnown RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms