RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 IRX6P78412 446 aaPredicted RBP5.31□□□□□ -1.56
BRCA2-206ENST00000544455 ABCC5O15440 1437 aa5.31□□□□□ -1.56
BRCA2-206ENST00000544455 KDM2AQ9Y2K7 1162 aa5.31□□□□□ -1.56
BRCA2-206ENST00000544455 DAPK1P53355 1430 aa5.31□□□□□ -1.56
BRCA2-206ENST00000544455 PBRM1Q86U86 1689 aa5.31□□□□□ -1.56
BRCA2-206ENST00000544455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.31□□□□□ -1.56
BRCA2-206ENST00000544455 FKBP8Q14318 412 aa5.31□□□□□ -1.56
BRCA2-206ENST00000544455 CDK11AQ9UQ88 783 aaPredicted RBP5.31□□□□□ -1.56
BRCA2-206ENST00000544455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.31□□□□□ -1.56
BRCA2-206ENST00000544455 CEP170Q5SW79 1584 aa5.31□□□□□ -1.56
BRCA2-206ENST00000544455 PLEKHD1A6NEE1 506 aa5.3□□□□□ -1.56
BRCA2-206ENST00000544455 HECW1Q76N89 1606 aa5.3□□□□□ -1.56
BRCA2-206ENST00000544455 PKD2Q13563 968 aa5.3□□□□□ -1.56
BRCA2-206ENST00000544455 ARHGEF11O15085 1522 aa5.3□□□□□ -1.56
BRCA2-206ENST00000544455 WASHC2AQ641Q2 1341 aa5.3□□□□□ -1.56
BRCA2-206ENST00000544455 KIAA0556O60303 1618 aa5.29□□□□□ -1.56
BRCA2-206ENST00000544455 FAM9BQ8IZU0 186 aa5.29□□□□□ -1.56
BRCA2-206ENST00000544455 SUPT6HQ7KZ85 1726 aaKnown RBP5.29□□□□□ -1.56
BRCA2-206ENST00000544455 SYNJ2O15056 1496 aa5.29□□□□□ -1.56
BRCA2-206ENST00000544455 RGL3Q3MIN7 710 aa5.28□□□□□ -1.56
BRCA2-206ENST00000544455 TCOF1Q13428 1488 aaKnown RBP5.28□□□□□ -1.56
BRCA2-206ENST00000544455 EIF4G2P78344 907 aaKnown RBP eCLIP5.28□□□□□ -1.56
BRCA2-206ENST00000544455 HNRNPUQ00839 825 aaKnown RBP eCLIP5.28□□□□□ -1.56
BRCA2-206ENST00000544455 TIMELESSQ9UNS1 1208 aa5.27□□□□□ -1.57
BRCA2-206ENST00000544455 MIA2Q96PC5 1412 aa5.27□□□□□ -1.57
BRCA2-206ENST00000544455 KDM5BQ9UGL1 1544 aa5.27□□□□□ -1.57
BRCA2-206ENST00000544455 CARMIL2Q6F5E8 1435 aa5.27□□□□□ -1.57
BRCA2-206ENST00000544455 CAMSAP2Q08AD1 1489 aa5.27□□□□□ -1.57
BRCA2-206ENST00000544455 TROQ12816 1431 aaPredicted RBP5.26□□□□□ -1.57
BRCA2-206ENST00000544455 KIF14Q15058 1648 aa5.26□□□□□ -1.57
BRCA2-206ENST00000544455 NUP155O75694 1391 aa5.26□□□□□ -1.57
BRCA2-206ENST00000544455 SENP3Q9H4L4 574 aaPredicted RBP5.26□□□□□ -1.57
BRCA2-206ENST00000544455 RAPGEF6Q8TEU7 1601 aa5.26□□□□□ -1.57
BRCA2-206ENST00000544455 PTPRGP23470 1445 aa5.26□□□□□ -1.57
BRCA2-206ENST00000544455 ATP10BO94823 1461 aa5.26□□□□□ -1.57
BRCA2-206ENST00000544455 GPATCH8Q9UKJ3 1502 aaKnown RBP5.25□□□□□ -1.57
BRCA2-206ENST00000544455 TSPY4P0CV99 314 aa5.25□□□□□ -1.57
BRCA2-206ENST00000544455 TSPY10P0CW01 314 aa5.25□□□□□ -1.57
BRCA2-206ENST00000544455 AKNAQ7Z591 1439 aa5.25□□□□□ -1.57
BRCA2-206ENST00000544455 DCAF11Q8TEB1 546 aa5.25□□□□□ -1.57
BRCA2-206ENST00000544455 ANKRD30BQ9BXX2 1392 aa5.25□□□□□ -1.57
BRCA2-206ENST00000544455 MYT1LQ9UL68 1186 aa5.25□□□□□ -1.57
BRCA2-206ENST00000544455 MAGI1Q96QZ7 1491 aaPredicted RBP5.25□□□□□ -1.57
BRCA2-206ENST00000544455 NUP160Q12769 1436 aa5.24□□□□□ -1.57
BRCA2-206ENST00000544455 NCOA1Q15788 1441 aa5.24□□□□□ -1.57
BRCA2-206ENST00000544455 KIF7Q2M1P5 1343 aa5.24□□□□□ -1.57
BRCA2-206ENST00000544455 SALL2Q9Y467 1007 aaPredicted RBP5.24□□□□□ -1.57
BRCA2-206ENST00000544455 CARD11Q9BXL7 1154 aa5.23□□□□□ -1.57
BRCA2-206ENST00000544455 MRS2Q9HD23 443 aa5.23□□□□□ -1.57
BRCA2-206ENST00000544455 PZPP20742 1482 aa5.23□□□□□ -1.57
BRCA2-206ENST00000544455 ERCC6L2Q5T890 1561 aa5.23□□□□□ -1.57
BRCA2-206ENST00000544455 ANKRD30AQ9BXX3 1397 aa5.23□□□□□ -1.57
BRCA2-206ENST00000544455 ANKRD50Q9ULJ7 1429 aa5.23□□□□□ -1.57
BRCA2-206ENST00000544455 PRKRIP1Q9H875 184 aaPredicted RBP5.22□□□□□ -1.57
BRCA2-206ENST00000544455 ROCK1Q13464 1354 aa5.22□□□□□ -1.57
BRCA2-206ENST00000544455 CCDC7Q96M83 1385 aa5.22□□□□□ -1.57
BRCA2-206ENST00000544455 RPRD2Q5VT52 1461 aaKnown RBP5.21□□□□□ -1.57
BRCA2-206ENST00000544455 KIF15Q9NS87 1388 aa5.21□□□□□ -1.58
BRCA2-206ENST00000544455 NBPF1Q3BBV0 1214 aa5.21□□□□□ -1.58
BRCA2-206ENST00000544455 CCER2I3L3R5 266 aa5.21□□□□□ -1.58
BRCA2-206ENST00000544455 AFAP1Q8N556 730 aa5.21□□□□□ -1.58
BRCA2-206ENST00000544455 C9orf84Q5VXU9 1444 aa5.21□□□□□ -1.58
BRCA2-206ENST00000544455 TEX14Q8IWB6 1497 aa5.21□□□□□ -1.58
BRCA2-206ENST00000544455 DNMT1P26358 1616 aaKnown RBP5.21□□□□□ -1.58
BRCA2-206ENST00000544455 TSHZ2Q9NRE2 1034 aa5.2□□□□□ -1.58
BRCA2-206ENST00000544455 ST20-MTHFSA0A0A6YYL1 179 aa5.2□□□□□ -1.58
BRCA2-206ENST00000544455 ABCC10Q5T3U5 1492 aa5.2□□□□□ -1.58
BRCA2-206ENST00000544455 CNTLNQ9NXG0 1405 aa5.2□□□□□ -1.58
BRCA2-206ENST00000544455 USP47Q96K76 1375 aa5.2□□□□□ -1.58
BRCA2-206ENST00000544455 NEFLP07196 543 aa5.2□□□□□ -1.58
BRCA2-206ENST00000544455 KIAA1107Q9UPP5 1409 aa5.19□□□□□ -1.58
BRCA2-206ENST00000544455 CC2D1BQ5T0F9 858 aaKnown RBP5.19□□□□□ -1.58
BRCA2-206ENST00000544455 ABCA8O94911 1581 aa5.18□□□□□ -1.58
BRCA2-206ENST00000544455 ARHGAP5Q13017 1502 aa5.18□□□□□ -1.58
BRCA2-206ENST00000544455 GCC2Q8IWJ2 1684 aa5.17□□□□□ -1.58
BRCA2-206ENST00000544455 MBD5Q9P267 1494 aa5.17□□□□□ -1.58
BRCA2-206ENST00000544455 ROCK2O75116 1388 aaKnown RBP5.17□□□□□ -1.58
BRCA2-206ENST00000544455 SYCP2Q9BX26 1530 aa5.17□□□□□ -1.58
BRCA2-206ENST00000544455 ARHGEF12Q9NZN5 1544 aa5.17□□□□□ -1.58
BRCA2-206ENST00000544455 PLEKHH2Q8IVE3 1493 aa5.17□□□□□ -1.58
BRCA2-206ENST00000544455 NUTM2DQ5VT03 806 aaPredicted RBP5.16□□□□□ -1.58
BRCA2-206ENST00000544455 SAMD9LQ8IVG5 1584 aa5.16□□□□□ -1.58
BRCA2-206ENST00000544455 TRAPPC8Q9Y2L5 1435 aa5.16□□□□□ -1.58
BRCA2-206ENST00000544455 MYT1Q01538 1121 aa5.16□□□□□ -1.58
BRCA2-206ENST00000544455 SPATA31E1Q6ZUB1 1445 aa5.16□□□□□ -1.58
BRCA2-206ENST00000544455 ADGRL2O95490 1459 aa5.15□□□□□ -1.58
BRCA2-206ENST00000544455 KIF3BO15066 747 aa5.15□□□□□ -1.58
BRCA2-206ENST00000544455 CHGAP10645 457 aaKnown RBP5.15□□□□□ -1.59
BRCA2-206ENST00000544455 EFCAB2Q5VUJ9 269 aa5.15□□□□□ -1.59
BRCA2-206ENST00000544455 TMC1Q8TDI8 760 aa5.15□□□□□ -1.59
BRCA2-206ENST00000544455 CCDC144AA2RUR9 1427 aa5.15□□□□□ -1.59
BRCA2-206ENST00000544455 TTC37Q6PGP7 1564 aa5.15□□□□□ -1.59
BRCA2-206ENST00000544455 B4GALNT3Q6L9W6 998 aa5.15□□□□□ -1.59
BRCA2-206ENST00000544455 CCDC141Q6ZP82 1450 aa5.15□□□□□ -1.59
BRCA2-206ENST00000544455 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.14□□□□□ -1.59
BRCA2-206ENST00000544455 DHX29Q7Z478 1369 aaKnown RBP5.14□□□□□ -1.59
BRCA2-206ENST00000544455 DISP3Q9P2K9 1392 aa5.14□□□□□ -1.59
BRCA2-206ENST00000544455 FAM135AQ9P2D6 1515 aa5.13□□□□□ -1.59
BRCA2-206ENST00000544455 SPAG9O60271 1321 aaKnown RBP5.13□□□□□ -1.59
BRCA2-206ENST00000544455 PLA2R1Q13018 1463 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms