RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 FBLN2P98095 1184 aa17.34■□□□□ 0.37
LRTOMT-221ENST00000544409 TROQ12816 1431 aaPredicted RBP17.33■□□□□ 0.37
LRTOMT-221ENST00000544409 DENND4BO75064 1496 aaPredicted RBP17.33■□□□□ 0.36
LRTOMT-221ENST00000544409 PRKCSHP14314 528 aaPredicted RBP17.33■□□□□ 0.36
LRTOMT-221ENST00000544409 HIRIP3Q9BW71 556 aaPredicted RBP17.33■□□□□ 0.36
LRTOMT-221ENST00000544409 KDM5BQ9UGL1 1544 aa17.33■□□□□ 0.36
LRTOMT-221ENST00000544409 ABCC5O15440 1437 aa17.32■□□□□ 0.36
LRTOMT-221ENST00000544409 ITSN2Q9NZM3 1697 aa17.32■□□□□ 0.36
LRTOMT-221ENST00000544409 PLB1Q6P1J6 1458 aa17.31■□□□□ 0.36
LRTOMT-221ENST00000544409 MPHOSPH9Q99550 1183 aa17.3■□□□□ 0.36
LRTOMT-221ENST00000544409 ADCY10Q96PN6 1610 aa17.3■□□□□ 0.36
LRTOMT-221ENST00000544409 PRG4Q92954 1404 aaPredicted RBP17.3■□□□□ 0.36
LRTOMT-221ENST00000544409 JPH4Q96JJ6 628 aa17.29■□□□□ 0.36
LRTOMT-221ENST00000544409 ZNF644Q9H582 1327 aaPredicted RBP17.28■□□□□ 0.36
LRTOMT-221ENST00000544409 KCNH8Q96L42 1107 aa17.27■□□□□ 0.35
LRTOMT-221ENST00000544409 CAMSAP2Q08AD1 1489 aa17.26■□□□□ 0.35
LRTOMT-221ENST00000544409 ANP32CO43423 234 aa17.25■□□□□ 0.35
LRTOMT-221ENST00000544409 KIF14Q15058 1648 aa17.25■□□□□ 0.35
LRTOMT-221ENST00000544409 CFDP1Q9UEE9 299 aaPredicted RBP17.24■□□□□ 0.35
LRTOMT-221ENST00000544409 ADGBQ8N7X0 1667 aa17.24■□□□□ 0.35
LRTOMT-221ENST00000544409 GPATCH8Q9UKJ3 1502 aaKnown RBP17.24■□□□□ 0.35
LRTOMT-221ENST00000544409 CCER2I3L3R5 266 aa17.23■□□□□ 0.35
LRTOMT-221ENST00000544409 ABCA8O94911 1581 aa17.22■□□□□ 0.35
LRTOMT-221ENST00000544409 CROCC2H7BZ55 1655 aa17.21■□□□□ 0.35
LRTOMT-221ENST00000544409 ANKRD30BQ9BXX2 1392 aa17.2■□□□□ 0.34
LRTOMT-221ENST00000544409 FOXD1Q16676 465 aa17.19■□□□□ 0.34
LRTOMT-221ENST00000544409 RPRD2Q5VT52 1461 aaKnown RBP17.18■□□□□ 0.34
LRTOMT-221ENST00000544409 ADGRL2O95490 1459 aa17.18■□□□□ 0.34
LRTOMT-221ENST00000544409 SLC4A1APQ9BWU0 796 aaKnown RBP17.18■□□□□ 0.34
LRTOMT-221ENST00000544409 PLEKHD1A6NEE1 506 aa17.17■□□□□ 0.34
LRTOMT-221ENST00000544409 L3MBTL2Q969R5 705 aa17.17■□□□□ 0.34
LRTOMT-221ENST00000544409 ZNF777Q9ULD5 760 aaPredicted RBP17.17■□□□□ 0.34
LRTOMT-221ENST00000544409 NCOA1Q15788 1441 aa17.17■□□□□ 0.34
LRTOMT-221ENST00000544409 HSPA5P11021 654 aaKnown RBP17.16■□□□□ 0.34
LRTOMT-221ENST00000544409 CDC42BPAQ5VT25 1732 aa17.16■□□□□ 0.34
LRTOMT-221ENST00000544409 ATP10BO94823 1461 aa17.15■□□□□ 0.34
LRTOMT-221ENST00000544409 EIF4G2P78344 907 aaKnown RBP eCLIP17.15■□□□□ 0.34
LRTOMT-221ENST00000544409 ANKRD30AQ9BXX3 1397 aa17.14■□□□□ 0.33
LRTOMT-221ENST00000544409 PZPP20742 1482 aa17.13■□□□□ 0.33
LRTOMT-221ENST00000544409 ABCC10Q5T3U5 1492 aa17.13■□□□□ 0.33
LRTOMT-221ENST00000544409 BCANQ96GW7 911 aa17.13■□□□□ 0.33
LRTOMT-221ENST00000544409 TEX14Q8IWB6 1497 aa17.13■□□□□ 0.33
LRTOMT-221ENST00000544409 SHANK2Q9UPX8 1470 aa17.1■□□□□ 0.33
LRTOMT-221ENST00000544409 WASHC2AQ641Q2 1341 aa17.1■□□□□ 0.33
LRTOMT-221ENST00000544409 PTPRGP23470 1445 aa17.09■□□□□ 0.33
LRTOMT-221ENST00000544409 CHD1O14646 1710 aa17.08■□□□□ 0.32
LRTOMT-221ENST00000544409 KIAA1107Q9UPP5 1409 aa17.07■□□□□ 0.32
LRTOMT-221ENST00000544409 ANKRD50Q9ULJ7 1429 aa17.07■□□□□ 0.32
LRTOMT-221ENST00000544409 C9orf84Q5VXU9 1444 aa17.06■□□□□ 0.32
LRTOMT-221ENST00000544409 NBPF8Q3BBV2 869 aa17.05■□□□□ 0.32
LRTOMT-221ENST00000544409 CNTLNQ9NXG0 1405 aa17.04■□□□□ 0.32
LRTOMT-221ENST00000544409 ARHGEF5Q12774 1597 aa17.03■□□□□ 0.32
LRTOMT-221ENST00000544409 TSPY4P0CV99 314 aa17.02■□□□□ 0.32
LRTOMT-221ENST00000544409 TSPY10P0CW01 314 aa17.02■□□□□ 0.32
LRTOMT-221ENST00000544409 PKD2Q13563 968 aa17.02■□□□□ 0.31
LRTOMT-221ENST00000544409 RBM19Q9Y4C8 960 aaKnown RBP17.02■□□□□ 0.31
LRTOMT-221ENST00000544409 CCDC7Q96M83 1385 aa17.02■□□□□ 0.31
LRTOMT-221ENST00000544409 POLR1AO95602 1720 aaPredicted RBP17.01■□□□□ 0.31
LRTOMT-221ENST00000544409 SHROOM2Q13796 1616 aa17.01■□□□□ 0.31
LRTOMT-221ENST00000544409 PREX2Q70Z35 1606 aa17■□□□□ 0.31
LRTOMT-221ENST00000544409 MBD5Q9P267 1494 aa17■□□□□ 0.31
LRTOMT-221ENST00000544409 KDM5DQ9BY66 1539 aa16.99■□□□□ 0.31
LRTOMT-221ENST00000544409 SPATA31E1Q6ZUB1 1445 aa16.99■□□□□ 0.31
LRTOMT-221ENST00000544409 CDC42BPBQ9Y5S2 1711 aa16.99■□□□□ 0.31
LRTOMT-221ENST00000544409 NUP155O75694 1391 aa16.98■□□□□ 0.31
LRTOMT-221ENST00000544409 SAMD9LQ8IVG5 1584 aa16.97■□□□□ 0.31
LRTOMT-221ENST00000544409 C11orf95C9JLR9 678 aaPredicted RBP16.97■□□□□ 0.31
LRTOMT-221ENST00000544409 HNRNPMP52272 730 aaKnown RBP eCLIP16.97■□□□□ 0.31
LRTOMT-221ENST00000544409 KIF15Q9NS87 1388 aa16.97■□□□□ 0.31
LRTOMT-221ENST00000544409 CCDC141Q6ZP82 1450 aa16.97■□□□□ 0.31
LRTOMT-221ENST00000544409 FKBP8Q14318 412 aa16.95■□□□□ 0.3
LRTOMT-221ENST00000544409 RSPH4AQ5TD94 716 aa16.94■□□□□ 0.3
LRTOMT-221ENST00000544409 NEFLP07196 543 aa16.93■□□□□ 0.3
LRTOMT-221ENST00000544409 KIF7Q2M1P5 1343 aa16.93■□□□□ 0.3
LRTOMT-221ENST00000544409 ABCC2Q92887 1545 aa16.91■□□□□ 0.3
LRTOMT-221ENST00000544409 TTC37Q6PGP7 1564 aa16.91■□□□□ 0.3
LRTOMT-221ENST00000544409 ARHGEF12Q9NZN5 1544 aa16.9■□□□□ 0.3
LRTOMT-221ENST00000544409 ARHGAP5Q13017 1502 aa16.9■□□□□ 0.3
LRTOMT-221ENST00000544409 MSH5O43196 834 aa16.9■□□□□ 0.3
LRTOMT-221ENST00000544409 HNRNPUQ00839 825 aaKnown RBP eCLIP16.9■□□□□ 0.3
LRTOMT-221ENST00000544409 ZNF326Q5BKZ1 582 aaKnown RBP16.9■□□□□ 0.3
LRTOMT-221ENST00000544409 PRKRIP1Q9H875 184 aaPredicted RBP16.9■□□□□ 0.3
LRTOMT-221ENST00000544409 UHRF1BP1Q6BDS2 1440 aa16.9■□□□□ 0.3
LRTOMT-221ENST00000544409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.89■□□□□ 0.3
LRTOMT-221ENST00000544409 MAST1Q9Y2H9 1570 aa16.89■□□□□ 0.29
LRTOMT-221ENST00000544409 USP47Q96K76 1375 aa16.89■□□□□ 0.29
LRTOMT-221ENST00000544409 SYCP2Q9BX26 1530 aa16.89■□□□□ 0.29
LRTOMT-221ENST00000544409 MYO5CQ9NQX4 1742 aa16.89■□□□□ 0.29
LRTOMT-221ENST00000544409 ERCC6L2Q5T890 1561 aa16.88■□□□□ 0.29
LRTOMT-221ENST00000544409 KDM5CP41229 1560 aa16.88■□□□□ 0.29
LRTOMT-221ENST00000544409 RALGAPBQ86X10 1494 aa16.87■□□□□ 0.29
LRTOMT-221ENST00000544409 ERICH6Q7L0X2 663 aa16.87■□□□□ 0.29
LRTOMT-221ENST00000544409 FAM135AQ9P2D6 1515 aa16.86■□□□□ 0.29
LRTOMT-221ENST00000544409 PLEKHH2Q8IVE3 1493 aa16.86■□□□□ 0.29
LRTOMT-221ENST00000544409 BCORL1Q5H9F3 1711 aa16.85■□□□□ 0.29
LRTOMT-221ENST00000544409 UNC13BO14795 1591 aa16.83■□□□□ 0.29
LRTOMT-221ENST00000544409 ARID4BQ4LE39 1312 aaPredicted RBP16.83■□□□□ 0.29
LRTOMT-221ENST00000544409 PLXNC1O60486 1568 aa16.83■□□□□ 0.28
LRTOMT-221ENST00000544409 CCDC184Q52MB2 194 aa16.83■□□□□ 0.28
LRTOMT-221ENST00000544409 MRS2Q9HD23 443 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms