RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 PLPPR3Q6T4P5 718 aa26.02■■□□□ 1.76
CD4-212ENST00000544344 MLECQ14165 292 aa25.98■■□□□ 1.75
CD4-212ENST00000544344 ARHGEF12Q9NZN5 1544 aa25.98■■□□□ 1.75
CD4-212ENST00000544344 ATP10AO60312 1499 aa25.95■■□□□ 1.74
CD4-212ENST00000544344 MYO5CQ9NQX4 1742 aa25.94■■□□□ 1.74
CD4-212ENST00000544344 C9orf84Q5VXU9 1444 aa25.92■■□□□ 1.74
CD4-212ENST00000544344 CERKQ8TCT0 537 aa25.91■■□□□ 1.74
CD4-212ENST00000544344 KIF14Q15058 1648 aa25.91■■□□□ 1.74
CD4-212ENST00000544344 EFCAB2Q5VUJ9 269 aa25.89■■□□□ 1.74
CD4-212ENST00000544344 FMN1Q68DA7 1419 aa25.88■■□□□ 1.73
CD4-212ENST00000544344 PREX1Q8TCU6 1659 aa25.88■■□□□ 1.73
CD4-212ENST00000544344 ARHGAP35Q9NRY4 1499 aa25.88■■□□□ 1.73
CD4-212ENST00000544344 KDM5CP41229 1560 aa25.86■■□□□ 1.73
CD4-212ENST00000544344 CEBPAP49715 358 aaPredicted RBP25.85■■□□□ 1.73
CD4-212ENST00000544344 ZNF518AQ6AHZ1 1483 aa25.84■■□□□ 1.73
CD4-212ENST00000544344 ATP1B4Q9UN42 357 aaPredicted RBP25.83■■□□□ 1.73
CD4-212ENST00000544344 LRRIQ1Q96JM4 1722 aa25.83■■□□□ 1.72
CD4-212ENST00000544344 TROQ12816 1431 aaPredicted RBP25.82■■□□□ 1.72
CD4-212ENST00000544344 STRCQ7RTU9 1775 aa25.82■■□□□ 1.72
CD4-212ENST00000544344 AFAP1Q8N556 730 aa25.81■■□□□ 1.72
CD4-212ENST00000544344 CDK11AQ9UQ88 783 aaPredicted RBP25.8■■□□□ 1.72
CD4-212ENST00000544344 ARHGAP5Q13017 1502 aa25.79■■□□□ 1.72
CD4-212ENST00000544344 DIP2CQ9Y2E4 1556 aa25.79■■□□□ 1.72
CD4-212ENST00000544344 UBTFP17480 764 aaKnown RBP25.79■■□□□ 1.72
CD4-212ENST00000544344 EHMT2Q96KQ7 1210 aa25.79■■□□□ 1.72
CD4-212ENST00000544344 REREQ9P2R6 1566 aa25.77■■□□□ 1.72
CD4-212ENST00000544344 CDC42BPBQ9Y5S2 1711 aa25.77■■□□□ 1.72
CD4-212ENST00000544344 SETD1BQ9UPS6 1966 aaKnown RBP25.75■■□□□ 1.71
CD4-212ENST00000544344 ABCA6Q8N139 1617 aa25.74■■□□□ 1.71
CD4-212ENST00000544344 MLH3Q9UHC1 1453 aa25.72■■□□□ 1.71
CD4-212ENST00000544344 CLIP1P30622 1438 aa25.72■■□□□ 1.71
CD4-212ENST00000544344 UHRF1BP1Q6BDS2 1440 aa25.71■■□□□ 1.71
CD4-212ENST00000544344 C3P01024 1663 aa25.71■■□□□ 1.71
CD4-212ENST00000544344 TRAPPC8Q9Y2L5 1435 aa25.69■■□□□ 1.7
CD4-212ENST00000544344 AGLP35573 1532 aa25.68■■□□□ 1.7
CD4-212ENST00000544344 PREX2Q70Z35 1606 aa25.68■■□□□ 1.7
CD4-212ENST00000544344 DMRT2Q9Y5R5 561 aa25.68■■□□□ 1.7
CD4-212ENST00000544344 ABCC1P33527 1531 aa25.68■■□□□ 1.7
CD4-212ENST00000544344 ITSN2Q9NZM3 1697 aa25.65■■□□□ 1.7
CD4-212ENST00000544344 MYT1LQ9UL68 1186 aa25.64■■□□□ 1.7
CD4-212ENST00000544344 KIDINS220Q9ULH0 1771 aa25.63■■□□□ 1.69
CD4-212ENST00000544344 PTPRTO14522 1441 aa25.62■■□□□ 1.69
CD4-212ENST00000544344 CASKIN1Q8WXD9 1431 aa25.6■■□□□ 1.69
CD4-212ENST00000544344 CDC42BPAQ5VT25 1732 aa25.6■■□□□ 1.69
CD4-212ENST00000544344 CCDC18Q5T9S5 1454 aa25.58■■□□□ 1.69
CD4-212ENST00000544344 LTBP4Q8N2S1 1624 aa25.56■■□□□ 1.68
CD4-212ENST00000544344 CHIC1Q5VXU3 224 aa25.55■■□□□ 1.68
CD4-212ENST00000544344 ILDR2Q71H61 639 aa25.55■■□□□ 1.68
CD4-212ENST00000544344 DISP3Q9P2K9 1392 aa25.53■■□□□ 1.68
CD4-212ENST00000544344 NCOA1Q15788 1441 aa25.53■■□□□ 1.68
CD4-212ENST00000544344 CNTLNQ9NXG0 1405 aa25.53■■□□□ 1.68
CD4-212ENST00000544344 SAMD9LQ8IVG5 1584 aa25.52■■□□□ 1.68
CD4-212ENST00000544344 ESF1Q9H501 851 aaKnown RBP25.51■■□□□ 1.67
CD4-212ENST00000544344 MROH2AA6NES4 1674 aa25.49■■□□□ 1.67
CD4-212ENST00000544344 NPATQ14207 1427 aa25.47■■□□□ 1.67
CD4-212ENST00000544344 SYCP2Q9BX26 1530 aa25.46■■□□□ 1.67
CD4-212ENST00000544344 GPATCH8Q9UKJ3 1502 aaKnown RBP25.46■■□□□ 1.67
CD4-212ENST00000544344 FYCO1Q9BQS8 1478 aa25.46■■□□□ 1.67
CD4-212ENST00000544344 IQSEC2Q5JU85 1478 aa25.45■■□□□ 1.66
CD4-212ENST00000544344 CAMSAP1Q5T5Y3 1602 aa25.45■■□□□ 1.66
CD4-212ENST00000544344 ZMYM3Q14202 1370 aa25.44■■□□□ 1.66
CD4-212ENST00000544344 SUPT6HQ7KZ85 1726 aaKnown RBP25.43■■□□□ 1.66
CD4-212ENST00000544344 ZNF777Q9ULD5 760 aaPredicted RBP25.42■■□□□ 1.66
CD4-212ENST00000544344 PLXNC1O60486 1568 aa25.41■■□□□ 1.66
CD4-212ENST00000544344 SPATA31D1Q6ZQQ2 1576 aa25.41■■□□□ 1.66
CD4-212ENST00000544344 SOCS7O14512 581 aa25.41■■□□□ 1.66
CD4-212ENST00000544344 SPAG9O60271 1321 aaKnown RBP25.4■■□□□ 1.66
CD4-212ENST00000544344 HNRNPMP52272 730 aaKnown RBP eCLIP25.4■■□□□ 1.66
CD4-212ENST00000544344 INO80Q9ULG1 1556 aaPredicted RBP25.39■■□□□ 1.66
CD4-212ENST00000544344 ATP7AQ04656 1500 aa25.39■■□□□ 1.66
CD4-212ENST00000544344 CLTCQ00610 1675 aaKnown RBP25.38■■□□□ 1.65
CD4-212ENST00000544344 KIAA1107Q9UPP5 1409 aa25.37■■□□□ 1.65
CD4-212ENST00000544344 ZNF142P52746 1687 aaPredicted RBP25.36■■□□□ 1.65
CD4-212ENST00000544344 MYO3AQ8NEV4 1616 aa25.35■■□□□ 1.65
CD4-212ENST00000544344 NCKAP5LQ9HCH0 1330 aa25.35■■□□□ 1.65
CD4-212ENST00000544344 A2MP01023 1474 aa25.34■■□□□ 1.65
CD4-212ENST00000544344 PTPRKQ15262 1439 aa25.34■■□□□ 1.65
CD4-212ENST00000544344 PLA2R1Q13018 1463 aa25.32■■□□□ 1.64
CD4-212ENST00000544344 PLEKHH2Q8IVE3 1493 aa25.32■■□□□ 1.64
CD4-212ENST00000544344 ZNF335Q9H4Z2 1342 aaPredicted RBP25.32■■□□□ 1.64
CD4-212ENST00000544344 CEP170BQ9Y4F5 1589 aaPredicted RBP25.31■■□□□ 1.64
CD4-212ENST00000544344 TCOF1Q13428 1488 aaKnown RBP25.3■■□□□ 1.64
CD4-212ENST00000544344 CFDP1Q9UEE9 299 aaPredicted RBP25.3■■□□□ 1.64
CD4-212ENST00000544344 CCNB3Q8WWL7 1395 aa25.27■■□□□ 1.64
CD4-212ENST00000544344 PKD2Q13563 968 aa25.26■■□□□ 1.63
CD4-212ENST00000544344 ADGBQ8N7X0 1667 aa25.26■■□□□ 1.63
CD4-212ENST00000544344 GGT6Q6P531 493 aa25.25■■□□□ 1.63
CD4-212ENST00000544344 MBD5Q9P267 1494 aa25.22■■□□□ 1.63
CD4-212ENST00000544344 ZNF644Q9H582 1327 aaPredicted RBP25.22■■□□□ 1.63
CD4-212ENST00000544344 TIAM1Q13009 1591 aa25.22■■□□□ 1.63
CD4-212ENST00000544344 PPP6R1Q9UPN7 881 aa25.21■■□□□ 1.63
CD4-212ENST00000544344 UBAP1LF5GYI3 381 aa25.2■■□□□ 1.62
CD4-212ENST00000544344 MTUS2Q5JR59 1369 aa25.19■■□□□ 1.62
CD4-212ENST00000544344 DNMT1P26358 1616 aaKnown RBP25.19■■□□□ 1.62
CD4-212ENST00000544344 A2ML1A8K2U0 1454 aa25.18■■□□□ 1.62
CD4-212ENST00000544344 RTEL1-TNFRSF6BF6WH68 1400 aa25.15■■□□□ 1.62
CD4-212ENST00000544344 DHX29Q7Z478 1369 aaKnown RBP25.13■■□□□ 1.61
CD4-212ENST00000544344 EHBP1L1Q8N3D4 1523 aa25.12■■□□□ 1.61
CD4-212ENST00000544344 NEURL4Q96JN8 1562 aa25.11■■□□□ 1.61
CD4-212ENST00000544344 CEP162Q5TB80 1403 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms