RNA–Protein interactions for RNA: ENST00000544216.7

LSM14A-203, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LSM14A, Length 3,596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-203ENST00000544216 MAGI1Q96QZ7 1491 aaPredicted RBP19.52■□□□□ 0.72
LSM14A-203ENST00000544216 DAPK1P53355 1430 aa19.51■□□□□ 0.71
LSM14A-203ENST00000544216 HSPA5P11021 654 aaKnown RBP19.51■□□□□ 0.71
LSM14A-203ENST00000544216 KDM6BO15054 1643 aa19.51■□□□□ 0.71
LSM14A-203ENST00000544216 ABCC5O15440 1437 aa19.5■□□□□ 0.71
LSM14A-203ENST00000544216 RAPGEF6Q8TEU7 1601 aa19.49■□□□□ 0.71
LSM14A-203ENST00000544216 EIF4G2P78344 907 aaKnown RBP eCLIP19.47■□□□□ 0.711e-21■■■□□ 15
LSM14A-203ENST00000544216 ZNF326Q5BKZ1 582 aaKnown RBP19.47■□□□□ 0.71
LSM14A-203ENST00000544216 TROQ12816 1431 aaPredicted RBP19.47■□□□□ 0.71
LSM14A-203ENST00000544216 CEP170Q5SW79 1584 aa19.47■□□□□ 0.71
LSM14A-203ENST00000544216 SUPT16HQ9Y5B9 1047 aaKnown RBP19.46■□□□□ 0.71
LSM14A-203ENST00000544216 DENND4BO75064 1496 aaPredicted RBP19.43■□□□□ 0.7
LSM14A-203ENST00000544216 AKNAQ7Z591 1439 aa19.43■□□□□ 0.7
LSM14A-203ENST00000544216 BCANQ96GW7 911 aa19.43■□□□□ 0.7
LSM14A-203ENST00000544216 CNGB1Q14028 1251 aaPredicted RBP19.41■□□□□ 0.7
LSM14A-203ENST00000544216 ROCK1Q13464 1354 aa19.4■□□□□ 0.7
LSM14A-203ENST00000544216 CCER2I3L3R5 266 aa19.4■□□□□ 0.7
LSM14A-203ENST00000544216 POLR3GLQ9BT43 218 aa19.4■□□□□ 0.7
LSM14A-203ENST00000544216 WASHC2AQ641Q2 1341 aa19.39■□□□□ 0.69
LSM14A-203ENST00000544216 GCC2Q8IWJ2 1684 aa19.39■□□□□ 0.69
LSM14A-203ENST00000544216 TSPY4P0CV99 314 aa19.38■□□□□ 0.69
LSM14A-203ENST00000544216 TSPY10P0CW01 314 aa19.38■□□□□ 0.69
LSM14A-203ENST00000544216 NBPF8Q3BBV2 869 aa19.38■□□□□ 0.69
LSM14A-203ENST00000544216 PKD2Q13563 968 aa19.38■□□□□ 0.69
LSM14A-203ENST00000544216 GPATCH8Q9UKJ3 1502 aaKnown RBP19.38■□□□□ 0.69
LSM14A-203ENST00000544216 HNRNPMP52272 730 aaKnown RBP eCLIP19.38■□□□□ 0.692e-8■■■□□ 15.5
LSM14A-203ENST00000544216 NUP160Q12769 1436 aa19.38■□□□□ 0.69
LSM14A-203ENST00000544216 CAMSAP2Q08AD1 1489 aa19.38■□□□□ 0.69
LSM14A-203ENST00000544216 ANKRD30BQ9BXX2 1392 aa19.37■□□□□ 0.69
LSM14A-203ENST00000544216 PTPRGP23470 1445 aa19.35■□□□□ 0.69
LSM14A-203ENST00000544216 FKBP8Q14318 412 aa19.34■□□□□ 0.69
LSM14A-203ENST00000544216 KDM5BQ9UGL1 1544 aa19.34■□□□□ 0.69
LSM14A-203ENST00000544216 ANKRD30AQ9BXX3 1397 aa19.34■□□□□ 0.69
LSM14A-203ENST00000544216 DNMT1P26358 1616 aaKnown RBP19.34■□□□□ 0.69
LSM14A-203ENST00000544216 KIF14Q15058 1648 aa19.34■□□□□ 0.69
LSM14A-203ENST00000544216 NCOA1Q15788 1441 aa19.33■□□□□ 0.69
LSM14A-203ENST00000544216 C11orf95C9JLR9 678 aaPredicted RBP19.32■□□□□ 0.68
LSM14A-203ENST00000544216 ATP10BO94823 1461 aa19.31■□□□□ 0.68
LSM14A-203ENST00000544216 HNRNPUQ00839 825 aaKnown RBP eCLIP19.31■□□□□ 0.68
LSM14A-203ENST00000544216 NEFLP07196 543 aa19.3■□□□□ 0.68
LSM14A-203ENST00000544216 NUP155O75694 1391 aa19.29■□□□□ 0.68
LSM14A-203ENST00000544216 KDM2AQ9Y2K7 1162 aa19.29■□□□□ 0.68
LSM14A-203ENST00000544216 ANKRD50Q9ULJ7 1429 aa19.27■□□□□ 0.68
LSM14A-203ENST00000544216 RPRD2Q5VT52 1461 aaKnown RBP19.27■□□□□ 0.68
LSM14A-203ENST00000544216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.24■□□□□ 0.673e-8■■□□□ 12.4
LSM14A-203ENST00000544216 FAM9BQ8IZU0 186 aa19.23■□□□□ 0.67
LSM14A-203ENST00000544216 PZPP20742 1482 aa19.22■□□□□ 0.67
LSM14A-203ENST00000544216 C9orf84Q5VXU9 1444 aa19.22■□□□□ 0.67
LSM14A-203ENST00000544216 CCDC7Q96M83 1385 aa19.21■□□□□ 0.67
LSM14A-203ENST00000544216 ITSN2Q9NZM3 1697 aa19.21■□□□□ 0.67
LSM14A-203ENST00000544216 CCDC184Q52MB2 194 aa19.21■□□□□ 0.67
LSM14A-203ENST00000544216 KIAA1107Q9UPP5 1409 aa19.2■□□□□ 0.66
LSM14A-203ENST00000544216 ABCA8O94911 1581 aa19.19■□□□□ 0.66
LSM14A-203ENST00000544216 KIF15Q9NS87 1388 aa19.19■□□□□ 0.66
LSM14A-203ENST00000544216 MRS2Q9HD23 443 aa19.19■□□□□ 0.66
LSM14A-203ENST00000544216 KIF7Q2M1P5 1343 aa19.18■□□□□ 0.66
LSM14A-203ENST00000544216 TEX14Q8IWB6 1497 aa19.18■□□□□ 0.66
LSM14A-203ENST00000544216 DCAF11Q8TEB1 546 aa19.17■□□□□ 0.66
LSM14A-203ENST00000544216 PRKRIP1Q9H875 184 aaPredicted RBP19.16■□□□□ 0.66
LSM14A-203ENST00000544216 ABCC10Q5T3U5 1492 aa19.16■□□□□ 0.66
LSM14A-203ENST00000544216 RGL3Q3MIN7 710 aa19.16■□□□□ 0.66
LSM14A-203ENST00000544216 CNTLNQ9NXG0 1405 aa19.15■□□□□ 0.66
LSM14A-203ENST00000544216 CARD11Q9BXL7 1154 aa19.14■□□□□ 0.66
LSM14A-203ENST00000544216 ADGRL2O95490 1459 aa19.13■□□□□ 0.65
LSM14A-203ENST00000544216 IRX6P78412 446 aaPredicted RBP19.13■□□□□ 0.65
LSM14A-203ENST00000544216 ADCY10Q96PN6 1610 aa19.12■□□□□ 0.65
LSM14A-203ENST00000544216 USP47Q96K76 1375 aa19.11■□□□□ 0.65
LSM14A-203ENST00000544216 CDC42BPAQ5VT25 1732 aa19.1■□□□□ 0.65
LSM14A-203ENST00000544216 SENP3-EIF4A1A0A087X0R7 540 aa19.09■□□□□ 0.65
LSM14A-203ENST00000544216 ADGBQ8N7X0 1667 aa19.08■□□□□ 0.65
LSM14A-203ENST00000544216 RSPH4AQ5TD94 716 aa19.07■□□□□ 0.64
LSM14A-203ENST00000544216 ARHGAP5Q13017 1502 aa19.05■□□□□ 0.64
LSM14A-203ENST00000544216 SPATA31E1Q6ZUB1 1445 aa19.05■□□□□ 0.64
LSM14A-203ENST00000544216 MYT1LQ9UL68 1186 aa19.05■□□□□ 0.64
LSM14A-203ENST00000544216 ST20-MTHFSA0A0A6YYL1 179 aa19.04■□□□□ 0.64
LSM14A-203ENST00000544216 CHD1O14646 1710 aa19.04■□□□□ 0.64
LSM14A-203ENST00000544216 MBD5Q9P267 1494 aa19.04■□□□□ 0.64
LSM14A-203ENST00000544216 CCDC141Q6ZP82 1450 aa19.04■□□□□ 0.64
LSM14A-203ENST00000544216 TSHZ2Q9NRE2 1034 aa19.03■□□□□ 0.64
LSM14A-203ENST00000544216 ERCC6L2Q5T890 1561 aa19.03■□□□□ 0.64
LSM14A-203ENST00000544216 CROCC2H7BZ55 1655 aa19.02■□□□□ 0.64
LSM14A-203ENST00000544216 SHANK2Q9UPX8 1470 aa19.02■□□□□ 0.64
LSM14A-203ENST00000544216 EFCAB2Q5VUJ9 269 aa18.99■□□□□ 0.63
LSM14A-203ENST00000544216 SYCP2Q9BX26 1530 aa18.98■□□□□ 0.63
LSM14A-203ENST00000544216 SAMD9LQ8IVG5 1584 aa18.98■□□□□ 0.63
LSM14A-203ENST00000544216 ROCK2O75116 1388 aaKnown RBP18.98■□□□□ 0.63
LSM14A-203ENST00000544216 CCDC144AA2RUR9 1427 aa18.96■□□□□ 0.63
LSM14A-203ENST00000544216 NBPF1Q3BBV0 1214 aa18.95■□□□□ 0.62
LSM14A-203ENST00000544216 TMC1Q8TDI8 760 aa18.94■□□□□ 0.62
LSM14A-203ENST00000544216 AFAP1Q8N556 730 aa18.94■□□□□ 0.62
LSM14A-203ENST00000544216 TTC37Q6PGP7 1564 aa18.93■□□□□ 0.62
LSM14A-203ENST00000544216 CDC42BPBQ9Y5S2 1711 aa18.93■□□□□ 0.62
LSM14A-203ENST00000544216 PLEKHH2Q8IVE3 1493 aa18.93■□□□□ 0.62
LSM14A-203ENST00000544216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.93■□□□□ 0.624e-9■■□□□ 12.8
LSM14A-203ENST00000544216 ARHGEF5Q12774 1597 aa18.92■□□□□ 0.62
LSM14A-203ENST00000544216 FAM135AQ9P2D6 1515 aa18.92■□□□□ 0.62
LSM14A-203ENST00000544216 ABCC2Q92887 1545 aa18.91■□□□□ 0.62
LSM14A-203ENST00000544216 PREX2Q70Z35 1606 aa18.9■□□□□ 0.62
LSM14A-203ENST00000544216 DHX29Q7Z478 1369 aaKnown RBP18.88■□□□□ 0.61
LSM14A-203ENST00000544216 SPAG9O60271 1321 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms