RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 ABCC5O15440 1437 aa29.36■■■□□ 2.29
COPS7A-218ENST00000543939 GCC2Q8IWJ2 1684 aa29.35■■■□□ 2.29
COPS7A-218ENST00000543939 PREX2Q70Z35 1606 aa29.33■■■□□ 2.29
COPS7A-218ENST00000543939 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.32■■■□□ 2.28
COPS7A-218ENST00000543939 CDC42BPBQ9Y5S2 1711 aa29.32■■■□□ 2.28
COPS7A-218ENST00000543939 TTC37Q6PGP7 1564 aa29.31■■■□□ 2.28
COPS7A-218ENST00000543939 CHIC2Q9UKJ5 165 aa29.29■■■□□ 2.28
COPS7A-218ENST00000543939 ROCK1Q13464 1354 aa29.28■■■□□ 2.28
COPS7A-218ENST00000543939 CROCC2H7BZ55 1655 aa29.28■■■□□ 2.28
COPS7A-218ENST00000543939 ZNF777Q9ULD5 760 aaPredicted RBP29.28■■■□□ 2.28
COPS7A-218ENST00000543939 MYO5CQ9NQX4 1742 aa29.25■■■□□ 2.27
COPS7A-218ENST00000543939 MAPKBP1O60336 1514 aa29.25■■■□□ 2.27
COPS7A-218ENST00000543939 RRP7BPQ9NSQ0 103 aa29.25■■■□□ 2.27
COPS7A-218ENST00000543939 ADGBQ8N7X0 1667 aa29.22■■■□□ 2.27
COPS7A-218ENST00000543939 SAMD9LQ8IVG5 1584 aa29.21■■■□□ 2.27
COPS7A-218ENST00000543939 KCNH8Q96L42 1107 aa29.2■■■□□ 2.26
COPS7A-218ENST00000543939 ARHGEF5Q12774 1597 aa29.18■■■□□ 2.26
COPS7A-218ENST00000543939 WDR7Q9Y4E6 1490 aa29.18■■■□□ 2.26
COPS7A-218ENST00000543939 KDM6BO15054 1643 aa29.18■■■□□ 2.26
COPS7A-218ENST00000543939 ADGRL2O95490 1459 aa29.17■■■□□ 2.26
COPS7A-218ENST00000543939 ARHGAP5Q13017 1502 aa29.16■■■□□ 2.26
COPS7A-218ENST00000543939 SHANK2Q9UPX8 1470 aa29.15■■■□□ 2.26
COPS7A-218ENST00000543939 MBD5Q9P267 1494 aa29.13■■■□□ 2.25
COPS7A-218ENST00000543939 PLCH2O75038 1416 aa29.12■■■□□ 2.25
COPS7A-218ENST00000543939 NCOA1Q15788 1441 aa29.12■■■□□ 2.25
COPS7A-218ENST00000543939 ASXL2Q76L83 1435 aa29.09■■■□□ 2.25
COPS7A-218ENST00000543939 HNRNPMP52272 730 aaKnown RBP eCLIP29.07■■■□□ 2.24
COPS7A-218ENST00000543939 C9orf84Q5VXU9 1444 aa29.07■■■□□ 2.24
COPS7A-218ENST00000543939 PLEKHH2Q8IVE3 1493 aa29.06■■■□□ 2.24
COPS7A-218ENST00000543939 ARAP3Q8WWN8 1544 aa29.06■■■□□ 2.24
COPS7A-218ENST00000543939 ANKRD30AQ9BXX3 1397 aa29.06■■■□□ 2.24
COPS7A-218ENST00000543939 CCDC141Q6ZP82 1450 aa29.06■■■□□ 2.24
COPS7A-218ENST00000543939 ABCA9Q8IUA7 1624 aa29.05■■■□□ 2.24
COPS7A-218ENST00000543939 SYCP2Q9BX26 1530 aa29.05■■■□□ 2.24
COPS7A-218ENST00000543939 ACIN1Q9UKV3 1341 aaKnown RBP29.05■■■□□ 2.24
COPS7A-218ENST00000543939 KIAA1107Q9UPP5 1409 aa29.05■■■□□ 2.24
COPS7A-218ENST00000543939 RSPH4AQ5TD94 716 aa29.04■■■□□ 2.24
COPS7A-218ENST00000543939 NPM1P06748 294 aaKnown RBP eCLIP29.03■■■□□ 2.24
COPS7A-218ENST00000543939 RIMBP3CA6NJZ7 1639 aa29.01■■■□□ 2.23
COPS7A-218ENST00000543939 RIMBP3BA6NNM3 1639 aa29.01■■■□□ 2.23
COPS7A-218ENST00000543939 RIMBP3Q9UFD9 1639 aa29.01■■■□□ 2.23
COPS7A-218ENST00000543939 TSPY4P0CV99 314 aa29■■■□□ 2.23
COPS7A-218ENST00000543939 TSPY10P0CW01 314 aa29■■■□□ 2.23
COPS7A-218ENST00000543939 EFCAB2Q5VUJ9 269 aa29■■■□□ 2.23
COPS7A-218ENST00000543939 MAST1Q9Y2H9 1570 aa28.98■■■□□ 2.23
COPS7A-218ENST00000543939 ABCC1P33527 1531 aa28.96■■■□□ 2.23
COPS7A-218ENST00000543939 TRIM52Q96A61 297 aa28.96■■■□□ 2.23
COPS7A-218ENST00000543939 ARHGEF12Q9NZN5 1544 aa28.96■■■□□ 2.23
COPS7A-218ENST00000543939 DENND4BO75064 1496 aaPredicted RBP28.95■■■□□ 2.22
COPS7A-218ENST00000543939 SIN3AQ96ST3 1273 aa28.92■■■□□ 2.22
COPS7A-218ENST00000543939 ANKRD50Q9ULJ7 1429 aa28.91■■■□□ 2.22
COPS7A-218ENST00000543939 KIF15Q9NS87 1388 aa28.88■■■□□ 2.21
COPS7A-218ENST00000543939 MPHOSPH9Q99550 1183 aa28.88■■■□□ 2.21
COPS7A-218ENST00000543939 PLXNC1O60486 1568 aa28.86■■■□□ 2.21
COPS7A-218ENST00000543939 FANCAO15360 1455 aa28.86■■■□□ 2.21
COPS7A-218ENST00000543939 CYB5RLQ6IPT4 315 aa28.85■■■□□ 2.21
COPS7A-218ENST00000543939 TIMELESSQ9UNS1 1208 aa28.85■■■□□ 2.21
COPS7A-218ENST00000543939 NEUROD1Q13562 356 aa28.84■■■□□ 2.21
COPS7A-218ENST00000543939 TRAPPC8Q9Y2L5 1435 aa28.83■■■□□ 2.21
COPS7A-218ENST00000543939 PZPP20742 1482 aa28.82■■■□□ 2.2
COPS7A-218ENST00000543939 KDM5DQ9BY66 1539 aa28.76■■■□□ 2.19
COPS7A-218ENST00000543939 SLC4A1APQ9BWU0 796 aaKnown RBP28.75■■■□□ 2.19
COPS7A-218ENST00000543939 CD109Q6YHK3 1445 aa28.75■■■□□ 2.19
COPS7A-218ENST00000543939 ZNF316A6NFI3 1004 aaPredicted RBP28.74■■■□□ 2.19
COPS7A-218ENST00000543939 ADGRL1O94910 1474 aa28.74■■■□□ 2.19
COPS7A-218ENST00000543939 CFAP74Q9C0B2 1584 aa28.73■■■□□ 2.19
COPS7A-218ENST00000543939 RTEL1-TNFRSF6BF6WH68 1400 aa28.73■■■□□ 2.19
COPS7A-218ENST00000543939 DUOX2Q9NRD8 1548 aa28.72■■■□□ 2.19
COPS7A-218ENST00000543939 ANKRD30BQ9BXX2 1392 aa28.7■■■□□ 2.19
COPS7A-218ENST00000543939 SCAPERQ9BY12 1400 aa28.7■■■□□ 2.19
COPS7A-218ENST00000543939 ZFYVE16Q7Z3T8 1539 aa28.7■■■□□ 2.18
COPS7A-218ENST00000543939 FOXD1Q16676 465 aa28.69■■■□□ 2.18
COPS7A-218ENST00000543939 AFAP1Q8N556 730 aa28.69■■■□□ 2.18
COPS7A-218ENST00000543939 SPAG9O60271 1321 aaKnown RBP28.68■■■□□ 2.18
COPS7A-218ENST00000543939 NUP155O75694 1391 aa28.68■■■□□ 2.18
COPS7A-218ENST00000543939 TONSLQ96HA7 1378 aa28.68■■■□□ 2.18
COPS7A-218ENST00000543939 UNC13BO14795 1591 aa28.67■■■□□ 2.18
COPS7A-218ENST00000543939 INO80Q9ULG1 1556 aaPredicted RBP28.67■■■□□ 2.18
COPS7A-218ENST00000543939 ERBINQ96RT1 1412 aa28.66■■■□□ 2.18
COPS7A-218ENST00000543939 GLI2P10070 1586 aa28.65■■■□□ 2.18
COPS7A-218ENST00000543939 MAP3K4Q9Y6R4 1608 aa28.64■■■□□ 2.18
COPS7A-218ENST00000543939 PPP1R15AO75807 674 aaPredicted RBP28.64■■■□□ 2.18
COPS7A-218ENST00000543939 ATP7AQ04656 1500 aa28.63■■■□□ 2.17
COPS7A-218ENST00000543939 PKD2Q13563 968 aa28.6■■■□□ 2.17
COPS7A-218ENST00000543939 RPRD2Q5VT52 1461 aaKnown RBP28.59■■■□□ 2.17
COPS7A-218ENST00000543939 NEO1Q92859 1461 aa28.59■■■□□ 2.17
COPS7A-218ENST00000543939 FAM135AQ9P2D6 1515 aa28.59■■■□□ 2.17
COPS7A-218ENST00000543939 ZNF518AQ6AHZ1 1483 aa28.57■■■□□ 2.16
COPS7A-218ENST00000543939 MAGI2Q86UL8 1455 aa28.57■■■□□ 2.16
COPS7A-218ENST00000543939 IQGAP3Q86VI3 1631 aa28.56■■■□□ 2.16
COPS7A-218ENST00000543939 DIP2BQ9P265 1576 aa28.55■■■□□ 2.16
COPS7A-218ENST00000543939 KIDINS220Q9ULH0 1771 aa28.54■■■□□ 2.16
COPS7A-218ENST00000543939 POGZQ7Z3K3 1410 aa28.54■■■□□ 2.16
COPS7A-218ENST00000543939 KDM5CP41229 1560 aa28.54■■■□□ 2.16
COPS7A-218ENST00000543939 DIEXFQ68CQ4 756 aaKnown RBP28.48■■■□□ 2.15
COPS7A-218ENST00000543939 DEPDC5O75140 1603 aa28.47■■■□□ 2.15
COPS7A-218ENST00000543939 TEX14Q8IWB6 1497 aa28.46■■■□□ 2.15
COPS7A-218ENST00000543939 EIF2AK4Q9P2K8 1649 aaKnown RBP28.46■■■□□ 2.15
COPS7A-218ENST00000543939 MLH3Q9UHC1 1453 aa28.46■■■□□ 2.15
COPS7A-218ENST00000543939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms