RNA–Protein interactions for RNA: ENST00000543938.5

AP3B2-210, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2

Gene AP3B2, Length 2,650 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-210ENST00000543938 GRIN2BQ13224 1484 aa16.84■□□□□ 0.29
AP3B2-210ENST00000543938 GAPVD1Q14C86 1478 aa16.84■□□□□ 0.29
AP3B2-210ENST00000543938 CLCN1P35523 988 aa16.83■□□□□ 0.28
AP3B2-210ENST00000543938 DNAJC5Q9H3Z4 198 aa16.83■□□□□ 0.28
AP3B2-210ENST00000543938 NCLP19338 710 aaKnown RBP16.83■□□□□ 0.28
AP3B2-210ENST00000543938 FTSJ3Q8IY81 847 aaKnown RBP16.82■□□□□ 0.28
AP3B2-210ENST00000543938 ZFP91Q96JP5 570 aaPredicted RBP16.82■□□□□ 0.28
AP3B2-210ENST00000543938 NFKBIBQ15653 356 aa16.81■□□□□ 0.28
AP3B2-210ENST00000543938 CHRM1P11229 460 aaPredicted RBP16.8■□□□□ 0.28
AP3B2-210ENST00000543938 TEX2Q8IWB9 1127 aa16.8■□□□□ 0.28
AP3B2-210ENST00000543938 PBRM1Q86U86 1689 aa16.79■□□□□ 0.28
AP3B2-210ENST00000543938 MAGI1Q96QZ7 1491 aaPredicted RBP16.79■□□□□ 0.28
AP3B2-210ENST00000543938 BCCIPQ9P287 314 aaKnown RBP eCLIP16.78■□□□□ 0.28
AP3B2-210ENST00000543938 SNAPC4Q5SXM2 1469 aa16.77■□□□□ 0.27
AP3B2-210ENST00000543938 CNKSR2Q8WXI2 1034 aa16.76■□□□□ 0.27
AP3B2-210ENST00000543938 OSCARQ8IYS5 282 aa16.75■□□□□ 0.27
AP3B2-210ENST00000543938 ERICH3Q5RHP9 1530 aa16.74■□□□□ 0.27
AP3B2-210ENST00000543938 TPM2P07951 284 aa16.74■□□□□ 0.27
AP3B2-210ENST00000543938 C14orf37Q86TY3 774 aa16.74■□□□□ 0.27
AP3B2-210ENST00000543938 SMAP1Q8IYB5 467 aaPredicted RBP16.74■□□□□ 0.27
AP3B2-210ENST00000543938 CHD1O14646 1710 aa16.72■□□□□ 0.27
AP3B2-210ENST00000543938 HNRNPUL2Q1KMD3 747 aaKnown RBP16.72■□□□□ 0.27
AP3B2-210ENST00000543938 SYNJ2O15056 1496 aa16.72■□□□□ 0.27
AP3B2-210ENST00000543938 FOXD1Q16676 465 aa16.71■□□□□ 0.27
AP3B2-210ENST00000543938 KIF27Q86VH2 1401 aa16.71■□□□□ 0.27
AP3B2-210ENST00000543938 SECISBP2LQ93073 1101 aaKnown RBP16.7■□□□□ 0.26
AP3B2-210ENST00000543938 DDRGK1Q96HY6 314 aa16.7■□□□□ 0.26
AP3B2-210ENST00000543938 TMEM51Q9NW97 253 aa16.7■□□□□ 0.26
AP3B2-210ENST00000543938 ZNF830Q96NB3 372 aaPredicted RBP16.68■□□□□ 0.26
AP3B2-210ENST00000543938 ADAMTS12P58397 1594 aa16.67■□□□□ 0.26
AP3B2-210ENST00000543938 DDX10Q13206 875 aaKnown RBP16.67■□□□□ 0.26
AP3B2-210ENST00000543938 CHMP7Q8WUX9 453 aaPredicted RBP16.67■□□□□ 0.26
AP3B2-210ENST00000543938 ARID4BQ4LE39 1312 aaPredicted RBP16.66■□□□□ 0.26
AP3B2-210ENST00000543938 FHAD1B1AJZ9 1412 aa16.66■□□□□ 0.26
AP3B2-210ENST00000543938 PPP1R15AO75807 674 aaPredicted RBP16.66■□□□□ 0.26
AP3B2-210ENST00000543938 FBLN2P98095 1184 aa16.65■□□□□ 0.26
AP3B2-210ENST00000543938 DHX57Q6P158 1386 aaKnown RBP16.65■□□□□ 0.26
AP3B2-210ENST00000543938 ANP32CO43423 234 aa16.65■□□□□ 0.26
AP3B2-210ENST00000543938 UTP14CQ5TAP6 766 aaKnown RBP16.65■□□□□ 0.26
AP3B2-210ENST00000543938 L1TD1Q5T7N2 865 aaKnown RBP16.64■□□□□ 0.25
AP3B2-210ENST00000543938 IGF1RP08069 1367 aa16.63■□□□□ 0.25
AP3B2-210ENST00000543938 PLCD3Q8N3E9 789 aa16.62■□□□□ 0.25
AP3B2-210ENST00000543938 MAP7D2Q96T17 732 aa16.62■□□□□ 0.25
AP3B2-210ENST00000543938 HSP90B1P14625 803 aaKnown RBP16.62■□□□□ 0.25
AP3B2-210ENST00000543938 HNRNPUQ00839 825 aaKnown RBP eCLIP16.62■□□□□ 0.25
AP3B2-210ENST00000543938 ZHX1Q9UKY1 873 aaPredicted RBP16.61■□□□□ 0.25
AP3B2-210ENST00000543938 GRIN2AQ12879 1464 aa16.61■□□□□ 0.25
AP3B2-210ENST00000543938 CUL7Q14999 1698 aa16.6■□□□□ 0.25
AP3B2-210ENST00000543938 VGFO15240 615 aaPredicted RBP16.59■□□□□ 0.25
AP3B2-210ENST00000543938 CLASP1Q7Z460 1538 aa16.57■□□□□ 0.24
AP3B2-210ENST00000543938 RNF216Q9NWF9 866 aaPredicted RBP16.57■□□□□ 0.24
AP3B2-210ENST00000543938 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.56■□□□□ 0.24
AP3B2-210ENST00000543938 NUP160Q12769 1436 aa16.56■□□□□ 0.24
AP3B2-210ENST00000543938 CEP162Q5TB80 1403 aa16.56■□□□□ 0.24
AP3B2-210ENST00000543938 PPP4R3BQ5MIZ7 849 aa16.55■□□□□ 0.24
AP3B2-210ENST00000543938 DMTNQ08495 405 aa16.55■□□□□ 0.24
AP3B2-210ENST00000543938 FBXO3Q9UK99 471 aa16.53■□□□□ 0.24
AP3B2-210ENST00000543938 RUSC2Q8N2Y8 1516 aa16.53■□□□□ 0.24
AP3B2-210ENST00000543938 CARMIL1Q5VZK9 1371 aa16.53■□□□□ 0.24
AP3B2-210ENST00000543938 CDK11BP21127 795 aaKnown RBP16.53■□□□□ 0.24
AP3B2-210ENST00000543938 CEP170Q5SW79 1584 aa16.51■□□□□ 0.23
AP3B2-210ENST00000543938 VGLL3A8MV65 326 aa16.51■□□□□ 0.23
AP3B2-210ENST00000543938 TCERG1O14776 1098 aaKnown RBP16.51■□□□□ 0.23
AP3B2-210ENST00000543938 FRAT2O75474 233 aaPredicted RBP16.51■□□□□ 0.23
AP3B2-210ENST00000543938 PDE4AP27815 886 aa16.51■□□□□ 0.23
AP3B2-210ENST00000543938 BACH2Q9BYV9 841 aa16.51■□□□□ 0.23
AP3B2-210ENST00000543938 AMER1Q5JTC6 1135 aaPredicted RBP16.5■□□□□ 0.23
AP3B2-210ENST00000543938 RGS22Q8NE09 1264 aa16.5■□□□□ 0.23
AP3B2-210ENST00000543938 ARHGEF11O15085 1522 aa16.47■□□□□ 0.23
AP3B2-210ENST00000543938 RIMBP3CA6NJZ7 1639 aa16.46■□□□□ 0.23
AP3B2-210ENST00000543938 RIMBP3BA6NNM3 1639 aa16.46■□□□□ 0.23
AP3B2-210ENST00000543938 RIMBP3Q9UFD9 1639 aa16.46■□□□□ 0.23
AP3B2-210ENST00000543938 KIF20AO95235 890 aa16.46■□□□□ 0.23
AP3B2-210ENST00000543938 MS4A1P11836 297 aa16.45■□□□□ 0.22
AP3B2-210ENST00000543938 TNNT2P45379 298 aaPredicted RBP16.45■□□□□ 0.22
AP3B2-210ENST00000543938 TAOK2Q9UL54 1235 aa16.45■□□□□ 0.22
AP3B2-210ENST00000543938 ANP32BQ92688 251 aaKnown RBP16.44■□□□□ 0.22
AP3B2-210ENST00000543938 RAPGEF2Q9Y4G8 1499 aa16.44■□□□□ 0.22
AP3B2-210ENST00000543938 TERF1P54274 439 aa16.43■□□□□ 0.22
AP3B2-210ENST00000543938 MTERF4Q7Z6M4 381 aaKnown RBP16.43■□□□□ 0.22
AP3B2-210ENST00000543938 SHROOM2Q13796 1616 aa16.43■□□□□ 0.22
AP3B2-210ENST00000543938 SIN3AQ96ST3 1273 aa16.42■□□□□ 0.22
AP3B2-210ENST00000543938 ESPNB1AK53 854 aa16.42■□□□□ 0.22
AP3B2-210ENST00000543938 IRX3P78415 501 aaPredicted RBP16.42■□□□□ 0.22
AP3B2-210ENST00000543938 CNPY4Q8N129 248 aa16.42■□□□□ 0.22
AP3B2-210ENST00000543938 PRXQ9BXM0 1461 aa16.42■□□□□ 0.22
AP3B2-210ENST00000543938 KIAA0586Q9BVV6 1533 aa16.41■□□□□ 0.22
AP3B2-210ENST00000543938 XRCC6P12956 609 aaKnown RBP eCLIP16.41■□□□□ 0.22
AP3B2-210ENST00000543938 ZSCAN20P17040 1043 aaPredicted RBP16.41■□□□□ 0.22
AP3B2-210ENST00000543938 RIPK4P57078 832 aa16.4■□□□□ 0.22
AP3B2-210ENST00000543938 POGKQ9P215 609 aa16.4■□□□□ 0.22
AP3B2-210ENST00000543938 TAF3Q5VWG9 929 aa16.4■□□□□ 0.22
AP3B2-210ENST00000543938 KIAA1211Q6ZU35 1233 aa16.4■□□□□ 0.22
AP3B2-210ENST00000543938 KCNG1Q9UIX4 513 aa16.39■□□□□ 0.21
AP3B2-210ENST00000543938 GTPBP4Q9BZE4 634 aaKnown RBP16.37■□□□□ 0.21
AP3B2-210ENST00000543938 RNF123Q5XPI4 1314 aa16.37■□□□□ 0.21
AP3B2-210ENST00000543938 PRDM10Q9NQV6 1147 aa16.37■□□□□ 0.21
AP3B2-210ENST00000543938 MMP14P50281 582 aa16.36■□□□□ 0.21
AP3B2-210ENST00000543938 FSD2A1L4K1 749 aa16.35■□□□□ 0.21
AP3B2-210ENST00000543938 LETM1O95202 739 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms