RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 MTUS2Q5JR59 1369 aa16.81■□□□□ 0.28
SMG8-202ENST00000543872 RRP1P56182 461 aaKnown RBP16.8■□□□□ 0.28
SMG8-202ENST00000543872 ZNF326Q5BKZ1 582 aaKnown RBP16.8■□□□□ 0.28
SMG8-202ENST00000543872 HFM1A2PYH4 1435 aa16.8■□□□□ 0.28
SMG8-202ENST00000543872 PEG3Q9GZU2 1588 aa16.8■□□□□ 0.28
SMG8-202ENST00000543872 NCAPD3P42695 1498 aa16.79■□□□□ 0.28
SMG8-202ENST00000543872 DDRGK1Q96HY6 314 aa16.79■□□□□ 0.28
SMG8-202ENST00000543872 NAIPQ13075 1403 aa16.79■□□□□ 0.28
SMG8-202ENST00000543872 FMN1Q68DA7 1419 aa16.79■□□□□ 0.28
SMG8-202ENST00000543872 RCAN3Q9UKA8 241 aa16.77■□□□□ 0.28
SMG8-202ENST00000543872 PCF11O94913 1555 aaKnown RBP16.77■□□□□ 0.27
SMG8-202ENST00000543872 MPHOSPH9Q99550 1183 aa16.76■□□□□ 0.27
SMG8-202ENST00000543872 GLIPR1L2Q4G1C9 344 aa16.76■□□□□ 0.27
SMG8-202ENST00000543872 PLIN1O60240 522 aa16.76■□□□□ 0.27
SMG8-202ENST00000543872 RSPH6AQ9H0K4 717 aa16.76■□□□□ 0.27
SMG8-202ENST00000543872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.76■□□□□ 0.27
SMG8-202ENST00000543872 BICRAQ9NZM4 1560 aa16.75■□□□□ 0.27
SMG8-202ENST00000543872 MS4A1P11836 297 aa16.75■□□□□ 0.27
SMG8-202ENST00000543872 PNISRQ8TF01 805 aaKnown RBP16.75■□□□□ 0.27
SMG8-202ENST00000543872 PTPN23Q9H3S7 1636 aa16.74■□□□□ 0.27
SMG8-202ENST00000543872 FRAT2O75474 233 aaPredicted RBP16.73■□□□□ 0.27
SMG8-202ENST00000543872 DCAF11Q8TEB1 546 aa16.71■□□□□ 0.26
SMG8-202ENST00000543872 ARXQ96QS3 562 aa16.68■□□□□ 0.26
SMG8-202ENST00000543872 FAM43AQ8N2R8 423 aa16.67■□□□□ 0.26
SMG8-202ENST00000543872 CDCA7LQ96GN5 454 aa16.66■□□□□ 0.26
SMG8-202ENST00000543872 CFAP43Q8NDM7 1665 aa16.66■□□□□ 0.26
SMG8-202ENST00000543872 CRBNQ96SW2 442 aa16.66■□□□□ 0.26
SMG8-202ENST00000543872 DHX29Q7Z478 1369 aaKnown RBP16.65■□□□□ 0.26
SMG8-202ENST00000543872 CASKIN1Q8WXD9 1431 aa16.63■□□□□ 0.25
SMG8-202ENST00000543872 ARID3CA6NKF2 412 aa16.62■□□□□ 0.25
SMG8-202ENST00000543872 SLC4A1APQ9BWU0 796 aaKnown RBP16.62■□□□□ 0.25
SMG8-202ENST00000543872 FYCO1Q9BQS8 1478 aa16.62■□□□□ 0.25
SMG8-202ENST00000543872 RGS3P49796 1198 aa16.6■□□□□ 0.25
SMG8-202ENST00000543872 DENND4BO75064 1496 aaPredicted RBP16.6■□□□□ 0.25
SMG8-202ENST00000543872 MYOM3Q5VTT5 1437 aa16.6■□□□□ 0.25
SMG8-202ENST00000543872 FGD5Q6ZNL6 1462 aa16.58■□□□□ 0.24
SMG8-202ENST00000543872 A0A0U1RQG5 324 aaPredicted RBP16.58■□□□□ 0.24
SMG8-202ENST00000543872 NAP1L5Q96NT1 182 aaPredicted RBP16.57■□□□□ 0.24
SMG8-202ENST00000543872 RRAGDQ9NQL2 400 aaPredicted RBP16.57■□□□□ 0.24
SMG8-202ENST00000543872 POGKQ9P215 609 aa16.57■□□□□ 0.24
SMG8-202ENST00000543872 SPATA31E1Q6ZUB1 1445 aa16.57■□□□□ 0.24
SMG8-202ENST00000543872 C20orf194Q5TEA3 1177 aa16.56■□□□□ 0.24
SMG8-202ENST00000543872 USP47Q96K76 1375 aa16.56■□□□□ 0.24
SMG8-202ENST00000543872 CFTRP13569 1480 aa16.55■□□□□ 0.24
SMG8-202ENST00000543872 FAM161AQ3B820 660 aa16.54■□□□□ 0.24
SMG8-202ENST00000543872 ANKRD30BQ9BXX2 1392 aa16.52■□□□□ 0.24
SMG8-202ENST00000543872 MYBBP1AQ9BQG0 1328 aaKnown RBP16.52■□□□□ 0.23
SMG8-202ENST00000543872 SLKQ9H2G2 1235 aaPredicted RBP16.51■□□□□ 0.23
SMG8-202ENST00000543872 KDM6BO15054 1643 aa16.51■□□□□ 0.23
SMG8-202ENST00000543872 PDE3BQ13370 1112 aa16.5■□□□□ 0.23
SMG8-202ENST00000543872 KDM2AQ9Y2K7 1162 aa16.5■□□□□ 0.23
SMG8-202ENST00000543872 C8orf34Q49A92 452 aa16.49■□□□□ 0.23
SMG8-202ENST00000543872 CARD11Q9BXL7 1154 aa16.49■□□□□ 0.23
SMG8-202ENST00000543872 KIF15Q9NS87 1388 aa16.49■□□□□ 0.23
SMG8-202ENST00000543872 LRPPRCP42704 1394 aaKnown RBP16.48■□□□□ 0.23
SMG8-202ENST00000543872 HSP90AA2PQ14568 343 aaPredicted RBP16.48■□□□□ 0.23
SMG8-202ENST00000543872 RPRD2Q5VT52 1461 aaKnown RBP16.48■□□□□ 0.23
SMG8-202ENST00000543872 RALBP1Q15311 655 aa16.47■□□□□ 0.23
SMG8-202ENST00000543872 BRD4O60885 1362 aaPredicted RBP16.47■□□□□ 0.23
SMG8-202ENST00000543872 PNNQ9H307 717 aaKnown RBP16.46■□□□□ 0.23
SMG8-202ENST00000543872 ST20-MTHFSA0A0A6YYL1 179 aa16.46■□□□□ 0.23
SMG8-202ENST00000543872 CENPQQ7L2Z9 268 aaPredicted RBP16.45■□□□□ 0.22
SMG8-202ENST00000543872 GZF1Q9H116 711 aaPredicted RBP16.44■□□□□ 0.22
SMG8-202ENST00000543872 TEX14Q8IWB6 1497 aa16.44■□□□□ 0.22
SMG8-202ENST00000543872 KTN1Q86UP2 1357 aaKnown RBP16.44■□□□□ 0.22
SMG8-202ENST00000543872 CC2D1BQ5T0F9 858 aaKnown RBP16.44■□□□□ 0.22
SMG8-202ENST00000543872 NLRP13Q86W25 1043 aa16.44■□□□□ 0.22
SMG8-202ENST00000543872 MIA2Q96PC5 1412 aa16.44■□□□□ 0.22
SMG8-202ENST00000543872 ARID4BQ4LE39 1312 aaPredicted RBP16.44■□□□□ 0.22
SMG8-202ENST00000543872 HSP90AA1P07900 732 aaKnown RBP16.44■□□□□ 0.22
SMG8-202ENST00000543872 L1TD1Q5T7N2 865 aaKnown RBP16.43■□□□□ 0.22
SMG8-202ENST00000543872 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
SMG8-202ENST00000543872 HECW1Q76N89 1606 aa16.42■□□□□ 0.22
SMG8-202ENST00000543872 RBM10P98175 930 aaKnown RBP16.42■□□□□ 0.22
SMG8-202ENST00000543872 KDM2BQ8NHM5 1336 aa16.41■□□□□ 0.22
SMG8-202ENST00000543872 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
SMG8-202ENST00000543872 SNAPC4Q5SXM2 1469 aa16.41■□□□□ 0.22
SMG8-202ENST00000543872 BCORL1Q5H9F3 1711 aa16.4■□□□□ 0.22
SMG8-202ENST00000543872 EFCAB5A4FU69 1503 aa16.4■□□□□ 0.22
SMG8-202ENST00000543872 ROCK2O75116 1388 aaKnown RBP16.4■□□□□ 0.22
SMG8-202ENST00000543872 SPRYD3Q8NCJ5 442 aa16.4■□□□□ 0.22
SMG8-202ENST00000543872 ZNF644Q9H582 1327 aaPredicted RBP16.39■□□□□ 0.21
SMG8-202ENST00000543872 PKD2Q13563 968 aa16.38■□□□□ 0.21
SMG8-202ENST00000543872 PANK2Q9BZ23 570 aa16.38■□□□□ 0.21
SMG8-202ENST00000543872 SUPT6HQ7KZ85 1726 aaKnown RBP16.37■□□□□ 0.21
SMG8-202ENST00000543872 RRP9O43818 475 aaKnown RBP16.37■□□□□ 0.21
SMG8-202ENST00000543872 RAD54L2Q9Y4B4 1467 aa16.37■□□□□ 0.21
SMG8-202ENST00000543872 BECN1Q14457 450 aa16.36■□□□□ 0.21
SMG8-202ENST00000543872 XRCC6P12956 609 aaKnown RBP eCLIP16.36■□□□□ 0.21
SMG8-202ENST00000543872 GOLGA6L3A6NEY3 463 aa16.35■□□□□ 0.21
SMG8-202ENST00000543872 SEC24BO95487 1268 aa16.35■□□□□ 0.21
SMG8-202ENST00000543872 AAMPQ13685 434 aa16.34■□□□□ 0.21
SMG8-202ENST00000543872 UGGT2Q9NYU1 1516 aa16.32■□□□□ 0.2
SMG8-202ENST00000543872 EHBP1L1Q8N3D4 1523 aa16.32■□□□□ 0.2
SMG8-202ENST00000543872 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.31■□□□□ 0.2
SMG8-202ENST00000543872 POLR1AO95602 1720 aaPredicted RBP16.31■□□□□ 0.2
SMG8-202ENST00000543872 GCC2Q8IWJ2 1684 aa16.31■□□□□ 0.2
SMG8-202ENST00000543872 FGD1P98174 961 aa16.31■□□□□ 0.2
SMG8-202ENST00000543872 MAGI3Q5TCQ9 1506 aa16.3■□□□□ 0.2
SMG8-202ENST00000543872 ADAMTS8Q9UP79 889 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms